RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 HOXC9P31274 260 aa21.28■■□□□ 1
TMEM220-202ENST00000455996 GOLGA2Q08379 1002 aa21.28■■□□□ 1
TMEM220-202ENST00000455996 SPATA31A3Q5VYP0 1347 aa21.27■■□□□ 1
TMEM220-202ENST00000455996 GCP02774 474 aa21.27■■□□□ 1
TMEM220-202ENST00000455996 WWC1Q8IX03 1113 aa21.27■■□□□ 1
TMEM220-202ENST00000455996 TRMT2AQ8IZ69 625 aaKnown RBP21.27■■□□□ 1
TMEM220-202ENST00000455996 DDX17Q92841 729 aaKnown RBP21.27■■□□□ 1
TMEM220-202ENST00000455996 CDCA7LQ96GN5 454 aa21.27■■□□□ 1
TMEM220-202ENST00000455996 SOS2Q07890 1332 aaPredicted RBP21.27■□□□□ 0.99
TMEM220-202ENST00000455996 ARHGEF10O15013 1369 aa21.26■□□□□ 0.99
TMEM220-202ENST00000455996 MAPK8IP3Q9UPT6 1336 aa21.26■□□□□ 0.99
TMEM220-202ENST00000455996 MED1Q15648 1581 aaPredicted RBP21.25■□□□□ 0.99
TMEM220-202ENST00000455996 PRKAR2BP31323 418 aa21.25■□□□□ 0.99
TMEM220-202ENST00000455996 IP6K1Q92551 441 aa21.25■□□□□ 0.99
TMEM220-202ENST00000455996 TMPOP42166 694 aaKnown RBP21.24■□□□□ 0.99
TMEM220-202ENST00000455996 SLFN5Q08AF3 891 aa21.24■□□□□ 0.99
TMEM220-202ENST00000455996 ARHGEF25Q86VW2 580 aa21.24■□□□□ 0.99
TMEM220-202ENST00000455996 WDR63Q8IWG1 891 aa21.23■□□□□ 0.99
TMEM220-202ENST00000455996 HMOX1P09601 288 aa21.22■□□□□ 0.99
TMEM220-202ENST00000455996 DUSP27Q5VZP5 1158 aa21.22■□□□□ 0.99
TMEM220-202ENST00000455996 KDRP35968 1356 aa21.22■□□□□ 0.99
TMEM220-202ENST00000455996 LTN1O94822 1766 aa21.22■□□□□ 0.99
TMEM220-202ENST00000455996 NHSL1Q5SYE7 1610 aa21.22■□□□□ 0.99
TMEM220-202ENST00000455996 IGSF1Q8N6C5 1336 aa21.21■□□□□ 0.99
TMEM220-202ENST00000455996 E9PSI1 815 aa21.21■□□□□ 0.99
TMEM220-202ENST00000455996 RRP7AQ9Y3A4 280 aaKnown RBP21.21■□□□□ 0.99
TMEM220-202ENST00000455996 RNF123Q5XPI4 1314 aa21.21■□□□□ 0.99
TMEM220-202ENST00000455996 LMOD2Q6P5Q4 547 aa21.21■□□□□ 0.99
TMEM220-202ENST00000455996 SUPT16HQ9Y5B9 1047 aaKnown RBP21.21■□□□□ 0.99
TMEM220-202ENST00000455996 NEFMP07197 916 aa21.2■□□□□ 0.98
TMEM220-202ENST00000455996 CRYBG1Q9Y4K1 1723 aa21.19■□□□□ 0.98
TMEM220-202ENST00000455996 NFE2L2Q16236 605 aa21.19■□□□□ 0.98
TMEM220-202ENST00000455996 SULT6B1Q6IMI4 303 aa21.19■□□□□ 0.98
TMEM220-202ENST00000455996 PHACTR3Q96KR7 559 aa21.19■□□□□ 0.98
TMEM220-202ENST00000455996 TRIM35Q9UPQ4 493 aa21.19■□□□□ 0.98
TMEM220-202ENST00000455996 EYA1Q99502 592 aa21.18■□□□□ 0.98
TMEM220-202ENST00000455996 SPINK5Q9NQ38 1064 aaPredicted RBP21.18■□□□□ 0.98
TMEM220-202ENST00000455996 ABCC6O95255 1503 aa21.18■□□□□ 0.98
TMEM220-202ENST00000455996 NEUROD2Q15784 382 aa21.17■□□□□ 0.98
TMEM220-202ENST00000455996 AEBP1Q8IUX7 1158 aa21.17■□□□□ 0.98
TMEM220-202ENST00000455996 IL16Q14005 1332 aa21.16■□□□□ 0.98
TMEM220-202ENST00000455996 RIPK4P57078 832 aa21.15■□□□□ 0.98
TMEM220-202ENST00000455996 CPDO75976 1380 aa21.15■□□□□ 0.98
TMEM220-202ENST00000455996 AHDC1Q5TGY3 1603 aaPredicted RBP21.14■□□□□ 0.97
TMEM220-202ENST00000455996 NCAPD2Q15021 1401 aa21.13■□□□□ 0.97
TMEM220-202ENST00000455996 NEFLP07196 543 aa21.12■□□□□ 0.97
TMEM220-202ENST00000455996 RCAN3Q9UKA8 241 aa21.12■□□□□ 0.97
TMEM220-202ENST00000455996 ROBO1Q9Y6N7 1651 aa21.11■□□□□ 0.97
TMEM220-202ENST00000455996 COL18A1P39060 1754 aa21.11■□□□□ 0.97
TMEM220-202ENST00000455996 LMOD3Q0VAK6 560 aa21.1■□□□□ 0.97
TMEM220-202ENST00000455996 MYH16Q9H6N6 1097 aa21.09■□□□□ 0.97
TMEM220-202ENST00000455996 AXIN2Q9Y2T1 843 aa21.09■□□□□ 0.97
TMEM220-202ENST00000455996 CAMTA1Q9Y6Y1 1673 aa21.09■□□□□ 0.97
TMEM220-202ENST00000455996 ZC3H6P61129 1189 aaKnown RBP21.08■□□□□ 0.97
TMEM220-202ENST00000455996 CABLES1Q8TDN4 633 aa21.08■□□□□ 0.97
TMEM220-202ENST00000455996 LTV1Q96GA3 475 aaPredicted RBP21.08■□□□□ 0.97
TMEM220-202ENST00000455996 FKBP8Q14318 412 aa21.07■□□□□ 0.96
TMEM220-202ENST00000455996 NBPF6Q5VWK0 638 aa21.07■□□□□ 0.96
TMEM220-202ENST00000455996 ANKRD24Q8TF21 1146 aa21.07■□□□□ 0.96
TMEM220-202ENST00000455996 NBPF4Q96M43 638 aa21.07■□□□□ 0.96
TMEM220-202ENST00000455996 CALD1Q05682 793 aaKnown RBP21.06■□□□□ 0.96
TMEM220-202ENST00000455996 ERICH6BQ5W0A0 696 aa21.06■□□□□ 0.96
TMEM220-202ENST00000455996 LMO7Q8WWI1 1683 aa21.06■□□□□ 0.96
TMEM220-202ENST00000455996 ZBTB7CA1YPR0 619 aa21.05■□□□□ 0.96
TMEM220-202ENST00000455996 ERBB3P21860 1342 aa21.05■□□□□ 0.96
TMEM220-202ENST00000455996 ABCA3Q99758 1704 aa21.05■□□□□ 0.96
TMEM220-202ENST00000455996 KIAA0232Q92628 1395 aa21.05■□□□□ 0.96
TMEM220-202ENST00000455996 LRRC59Q96AG4 307 aaKnown RBP21.04■□□□□ 0.96
TMEM220-202ENST00000455996 PLEKHG5O94827 1062 aa21.04■□□□□ 0.96
TMEM220-202ENST00000455996 GAS2L2Q8NHY3 880 aa21.04■□□□□ 0.96
TMEM220-202ENST00000455996 TOM1O60784 492 aa21.03■□□□□ 0.96
TMEM220-202ENST00000455996 RRP1P56182 461 aaKnown RBP21.03■□□□□ 0.96
TMEM220-202ENST00000455996 MTHFSDQ2M296 383 aaKnown RBP21.03■□□□□ 0.96
TMEM220-202ENST00000455996 DLG5Q8TDM6 1919 aa21.03■□□□□ 0.96
TMEM220-202ENST00000455996 HTATSF1O43719 755 aaKnown RBP21.02■□□□□ 0.96
TMEM220-202ENST00000455996 CT47B1P0C2W7 299 aaPredicted RBP21.02■□□□□ 0.96
TMEM220-202ENST00000455996 ZNF853P0CG23 659 aa21.02■□□□□ 0.96
TMEM220-202ENST00000455996 FANCIQ9NVI1 1328 aa21.02■□□□□ 0.95
TMEM220-202ENST00000455996 COL22A1Q8NFW1 1626 aaPredicted RBP21.01■□□□□ 0.95
TMEM220-202ENST00000455996 IFT57Q9NWB7 429 aa21.01■□□□□ 0.95
TMEM220-202ENST00000455996 PLEKHG2Q9H7P9 1386 aa21.01■□□□□ 0.95
TMEM220-202ENST00000455996 USHBP1Q8N6Y0 703 aa21■□□□□ 0.95
TMEM220-202ENST00000455996 FAM208AQ9UK61 1670 aaKnown RBP21■□□□□ 0.95
TMEM220-202ENST00000455996 RGPD5Q99666 1765 aa20.99■□□□□ 0.95
TMEM220-202ENST00000455996 RGPD2P0DJD1 1756 aa20.98■□□□□ 0.95
TMEM220-202ENST00000455996 GNAI1P63096 354 aa20.98■□□□□ 0.95
TMEM220-202ENST00000455996 CHRNA2Q15822 529 aa20.97■□□□□ 0.95
TMEM220-202ENST00000455996 CFAP44Q96MT7 982 aa20.97■□□□□ 0.95
TMEM220-202ENST00000455996 COL16A1Q07092 1604 aaPredicted RBP20.97■□□□□ 0.95
TMEM220-202ENST00000455996 THUMPD2Q9BTF0 503 aaKnown RBP20.96■□□□□ 0.95
TMEM220-202ENST00000455996 PRDM11Q9NQV5 511 aa20.96■□□□□ 0.95
TMEM220-202ENST00000455996 CRB1P82279 1406 aa20.96■□□□□ 0.95
TMEM220-202ENST00000455996 FAM83GA6ND36 823 aa20.95■□□□□ 0.95
TMEM220-202ENST00000455996 AMOTQ4VCS5 1084 aa20.95■□□□□ 0.95
TMEM220-202ENST00000455996 TSR2Q969E8 191 aaKnown RBP20.95■□□□□ 0.95
TMEM220-202ENST00000455996 MAP3K5Q99683 1374 aa20.94■□□□□ 0.94
TMEM220-202ENST00000455996 GNAT3A8MTJ3 354 aa20.94■□□□□ 0.94
TMEM220-202ENST00000455996 IRX6P78412 446 aaPredicted RBP20.94■□□□□ 0.94
TMEM220-202ENST00000455996 DCTN1Q14203 1278 aa20.94■□□□□ 0.94
TMEM220-202ENST00000455996 LRRC37A3O60309 1634 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms