RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 CFAP70Q5T0N1 1121 aa6.94□□□□□ -1.3
GTF3C3-208ENST00000455546 ARIH1Q9Y4X5 557 aaPredicted RBP6.94□□□□□ -1.3
GTF3C3-208ENST00000455546 SOS2Q07890 1332 aaPredicted RBP6.94□□□□□ -1.3
GTF3C3-208ENST00000455546 SPATA31E1Q6ZUB1 1445 aa6.93□□□□□ -1.3
GTF3C3-208ENST00000455546 RBM26Q5T8P6 1007 aaKnown RBP6.93□□□□□ -1.3
GTF3C3-208ENST00000455546 C3orf67Q6ZVT6 689 aa6.93□□□□□ -1.3
GTF3C3-208ENST00000455546 ZC3H15Q8WU90 426 aaKnown RBP6.93□□□□□ -1.3
GTF3C3-208ENST00000455546 PTCH1Q13635 1447 aa6.93□□□□□ -1.3
GTF3C3-208ENST00000455546 RBM6P78332 1123 aaKnown RBP6.92□□□□□ -1.3
GTF3C3-208ENST00000455546 C14orf93Q9H972 538 aaKnown RBP6.92□□□□□ -1.3
GTF3C3-208ENST00000455546 USP21Q9UK80 565 aa6.92□□□□□ -1.3
GTF3C3-208ENST00000455546 IFT172Q9UG01 1749 aa6.92□□□□□ -1.3
GTF3C3-208ENST00000455546 ANKRD30BQ9BXX2 1392 aa6.92□□□□□ -1.3
GTF3C3-208ENST00000455546 PDIA6Q15084 440 aa6.91□□□□□ -1.3
GTF3C3-208ENST00000455546 LRPPRCP42704 1394 aaKnown RBP6.91□□□□□ -1.3
GTF3C3-208ENST00000455546 ABCC11Q96J66 1382 aa6.91□□□□□ -1.3
GTF3C3-208ENST00000455546 RAB3GAP2Q9H2M9 1393 aa6.91□□□□□ -1.3
GTF3C3-208ENST00000455546 MAP3K9P80192 1104 aa6.9□□□□□ -1.3
GTF3C3-208ENST00000455546 SMYD5Q6GMV2 418 aa6.9□□□□□ -1.3
GTF3C3-208ENST00000455546 KRT28Q7Z3Y7 464 aa6.9□□□□□ -1.3
GTF3C3-208ENST00000455546 CABLES1Q8TDN4 633 aa6.9□□□□□ -1.3
GTF3C3-208ENST00000455546 PRAM1Q96QH2 718 aa6.9□□□□□ -1.3
GTF3C3-208ENST00000455546 NPHP3Q7Z494 1330 aa6.9□□□□□ -1.3
GTF3C3-208ENST00000455546 PIK3C2GO75747 1445 aa6.9□□□□□ -1.31
GTF3C3-208ENST00000455546 YTHDC2Q9H6S0 1430 aaKnown RBP6.9□□□□□ -1.31
GTF3C3-208ENST00000455546 LAMC1P11047 1609 aa6.9□□□□□ -1.31
GTF3C3-208ENST00000455546 GRXCR2A6NFK2 248 aa6.89□□□□□ -1.31
GTF3C3-208ENST00000455546 FNBP4Q8N3X1 1017 aaPredicted RBP6.89□□□□□ -1.31
GTF3C3-208ENST00000455546 PMFBP1Q8TBY8 1022 aa6.89□□□□□ -1.31
GTF3C3-208ENST00000455546 DCAF11Q8TEB1 546 aa6.89□□□□□ -1.31
GTF3C3-208ENST00000455546 HIRIP3Q9BW71 556 aaPredicted RBP6.89□□□□□ -1.31
GTF3C3-208ENST00000455546 POGKQ9P215 609 aa6.89□□□□□ -1.31
GTF3C3-208ENST00000455546 TRPC5Q9UL62 973 aaPredicted RBP6.89□□□□□ -1.31
GTF3C3-208ENST00000455546 TRAK1Q9UPV9 953 aa6.89□□□□□ -1.31
GTF3C3-208ENST00000455546 PXDNQ92626 1479 aa6.88□□□□□ -1.31
GTF3C3-208ENST00000455546 RGS12O14924 1447 aa6.88□□□□□ -1.31
GTF3C3-208ENST00000455546 PRAG1Q86YV5 1406 aa6.88□□□□□ -1.31
GTF3C3-208ENST00000455546 DHX57Q6P158 1386 aaKnown RBP6.88□□□□□ -1.31
GTF3C3-208ENST00000455546 SIRT1Q96EB6 747 aa6.88□□□□□ -1.31
GTF3C3-208ENST00000455546 SLC24A3Q9HC58 644 aa6.88□□□□□ -1.31
GTF3C3-208ENST00000455546 FMN2Q9NZ56 1722 aa6.87□□□□□ -1.31
GTF3C3-208ENST00000455546 TECPR2O15040 1411 aa6.87□□□□□ -1.31
GTF3C3-208ENST00000455546 SPATA31A3Q5VYP0 1347 aa6.87□□□□□ -1.31
GTF3C3-208ENST00000455546 MINK1Q8N4C8 1332 aaPredicted RBP6.87□□□□□ -1.31
GTF3C3-208ENST00000455546 SPDYE16A6NNV3 312 aaPredicted RBP6.87□□□□□ -1.31
GTF3C3-208ENST00000455546 PSME1Q06323 249 aa6.87□□□□□ -1.31
GTF3C3-208ENST00000455546 GPIHBP1Q8IV16 184 aa6.87□□□□□ -1.31
GTF3C3-208ENST00000455546 KNDC1Q76NI1 1749 aa6.87□□□□□ -1.31
GTF3C3-208ENST00000455546 MARF1Q9Y4F3 1742 aaKnown RBP6.87□□□□□ -1.31
GTF3C3-208ENST00000455546 CDC42BPGQ6DT37 1551 aa6.86□□□□□ -1.31
GTF3C3-208ENST00000455546 BCL9LQ86UU0 1499 aa6.86□□□□□ -1.31
GTF3C3-208ENST00000455546 CDK12Q9NYV4 1490 aaPredicted RBP6.86□□□□□ -1.31
GTF3C3-208ENST00000455546 OXER1Q8TDS5 423 aa6.86□□□□□ -1.31
GTF3C3-208ENST00000455546 DDX12PQ92771 950 aa6.86□□□□□ -1.31
GTF3C3-208ENST00000455546 GJD4Q96KN9 370 aaPredicted RBP6.86□□□□□ -1.31
GTF3C3-208ENST00000455546 COL22A1Q8NFW1 1626 aaPredicted RBP6.86□□□□□ -1.31
GTF3C3-208ENST00000455546 NRXN1Q9ULB1 1477 aa6.85□□□□□ -1.31
GTF3C3-208ENST00000455546 ACIN1Q9UKV3 1341 aaKnown RBP6.85□□□□□ -1.31
GTF3C3-208ENST00000455546 UNC5CLQ8IV45 518 aa6.85□□□□□ -1.31
GTF3C3-208ENST00000455546 MYOM2P54296 1465 aa6.85□□□□□ -1.31
GTF3C3-208ENST00000455546 ATRNO75882 1429 aa6.84□□□□□ -1.31
GTF3C3-208ENST00000455546 PRR36Q9H6K5 1346 aa6.84□□□□□ -1.31
GTF3C3-208ENST00000455546 FAM83GA6ND36 823 aa6.84□□□□□ -1.31
GTF3C3-208ENST00000455546 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.84□□□□□ -1.31
GTF3C3-208ENST00000455546 CCDC9Q9Y3X0 531 aaKnown RBP6.84□□□□□ -1.31
GTF3C3-208ENST00000455546 BRWD3Q6RI45 1802 aa6.84□□□□□ -1.31
GTF3C3-208ENST00000455546 WASLO00401 505 aaPredicted RBP6.83□□□□□ -1.32
GTF3C3-208ENST00000455546 EVI5O60447 810 aa6.83□□□□□ -1.32
GTF3C3-208ENST00000455546 HRCP23327 699 aa6.83□□□□□ -1.32
GTF3C3-208ENST00000455546 USP32Q8NFA0 1604 aa6.83□□□□□ -1.32
GTF3C3-208ENST00000455546 KIF1AQ12756 1690 aa6.82□□□□□ -1.32
GTF3C3-208ENST00000455546 ZMYND10O75800 440 aa6.82□□□□□ -1.32
GTF3C3-208ENST00000455546 NBPF1Q3BBV0 1214 aa6.82□□□□□ -1.32
GTF3C3-208ENST00000455546 NUTM2GQ5VZR2 741 aa6.82□□□□□ -1.32
GTF3C3-208ENST00000455546 SEPT12Q8IYM1 358 aa6.82□□□□□ -1.32
GTF3C3-208ENST00000455546 NGDNQ8NEJ9 315 aaKnown RBP6.82□□□□□ -1.32
GTF3C3-208ENST00000455546 CDK19Q9BWU1 502 aa6.82□□□□□ -1.32
GTF3C3-208ENST00000455546 ADGRB1O14514 1584 aa6.82□□□□□ -1.32
GTF3C3-208ENST00000455546 ATAD2Q6PL18 1390 aa6.82□□□□□ -1.32
GTF3C3-208ENST00000455546 SLIT2O94813 1529 aa6.81□□□□□ -1.32
GTF3C3-208ENST00000455546 RALGAPBQ86X10 1494 aa6.81□□□□□ -1.32
GTF3C3-208ENST00000455546 POTEB2H3BUK9 544 aa6.81□□□□□ -1.32
GTF3C3-208ENST00000455546 TBC1D12O60347 775 aa6.81□□□□□ -1.32
GTF3C3-208ENST00000455546 POTEJP0CG39 1038 aa6.81□□□□□ -1.32
GTF3C3-208ENST00000455546 NUDT16Q96DE0 195 aaKnown RBP6.81□□□□□ -1.32
GTF3C3-208ENST00000455546 BTG4Q9NY30 223 aa6.81□□□□□ -1.32
GTF3C3-208ENST00000455546 TNS3Q68CZ2 1445 aa6.81□□□□□ -1.32
GTF3C3-208ENST00000455546 GLI3P10071 1580 aa6.81□□□□□ -1.32
GTF3C3-208ENST00000455546 SBNO1A3KN83 1393 aa6.81□□□□□ -1.32
GTF3C3-208ENST00000455546 DLC1Q96QB1 1528 aa6.81□□□□□ -1.32
GTF3C3-208ENST00000455546 A0A0G2JS52 829 aa6.8□□□□□ -1.32
GTF3C3-208ENST00000455546 PRIM1P49642 420 aaKnown RBP6.8□□□□□ -1.32
GTF3C3-208ENST00000455546 BRPF1P55201 1214 aaPredicted RBP6.8□□□□□ -1.32
GTF3C3-208ENST00000455546 MYT1Q01538 1121 aa6.8□□□□□ -1.32
GTF3C3-208ENST00000455546 VPS72Q15906 364 aa6.8□□□□□ -1.32
GTF3C3-208ENST00000455546 FAM182BQ5T319 152 aa6.8□□□□□ -1.32
GTF3C3-208ENST00000455546 DEFB132Q7Z7B7 95 aa6.8□□□□□ -1.32
GTF3C3-208ENST00000455546 GPRASP1Q5JY77 1395 aa6.8□□□□□ -1.32
GTF3C3-208ENST00000455546 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.79□□□□□ -1.32
GTF3C3-208ENST00000455546 TRPM3Q9HCF6 1732 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms