RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 CPSF1Q10570 1443 aaKnown RBP26.9■■□□□ 1.9
MSH6-206ENST00000455383 ARHGEF25Q86VW2 580 aa26.9■■□□□ 1.9
MSH6-206ENST00000455383 ZNF692Q9BU19 519 aaPredicted RBP26.9■■□□□ 1.9
MSH6-206ENST00000455383 TTC21BQ7Z4L5 1316 aa26.9■■□□□ 1.9
MSH6-206ENST00000455383 WNK3Q9BYP7 1800 aa26.89■■□□□ 1.9
MSH6-206ENST00000455383 CDCA7Q9BWT1 371 aaPredicted RBP26.88■■□□□ 1.89
MSH6-206ENST00000455383 BCL11BQ9C0K0 894 aaPredicted RBP26.88■■□□□ 1.89
MSH6-206ENST00000455383 SPON1Q9HCB6 807 aa26.88■■□□□ 1.89
MSH6-206ENST00000455383 KCNQ2O43526 872 aa26.87■■□□□ 1.89
MSH6-206ENST00000455383 AKAP12Q02952 1782 aa26.86■■□□□ 1.89
MSH6-206ENST00000455383 MARCH10Q8NA82 808 aaPredicted RBP26.86■■□□□ 1.89
MSH6-206ENST00000455383 KCNH5Q8NCM2 988 aa26.86■■□□□ 1.89
MSH6-206ENST00000455383 TTC21AQ8NDW8 1320 aa26.86■■□□□ 1.89
MSH6-206ENST00000455383 PTF1AQ7RTS3 328 aa26.85■■□□□ 1.89
MSH6-206ENST00000455383 CARD10Q9BWT7 1032 aa26.84■■□□□ 1.89
MSH6-206ENST00000455383 ANO8Q9HCE9 1232 aaPredicted RBP26.83■■□□□ 1.89
MSH6-206ENST00000455383 NFAT5O94916 1531 aa26.83■■□□□ 1.89
MSH6-206ENST00000455383 PROM2Q8N271 834 aa26.82■■□□□ 1.88
MSH6-206ENST00000455383 SIN3AQ96ST3 1273 aa26.82■■□□□ 1.88
MSH6-206ENST00000455383 ROCK2O75116 1388 aaKnown RBP26.82■■□□□ 1.88
MSH6-206ENST00000455383 NINLQ9Y2I6 1382 aa26.81■■□□□ 1.88
MSH6-206ENST00000455383 RGPD5Q99666 1765 aa26.81■■□□□ 1.88
MSH6-206ENST00000455383 CASZ1Q86V15 1759 aa26.8■■□□□ 1.88
MSH6-206ENST00000455383 ABCC6O95255 1503 aa26.8■■□□□ 1.88
MSH6-206ENST00000455383 PPP1R1BQ9UD71 204 aaPredicted RBP26.78■■□□□ 1.88
MSH6-206ENST00000455383 KTN1Q86UP2 1357 aaKnown RBP26.77■■□□□ 1.88
MSH6-206ENST00000455383 CCDC7Q96M83 1385 aa26.76■■□□□ 1.87
MSH6-206ENST00000455383 SOX12O15370 315 aa26.76■■□□□ 1.87
MSH6-206ENST00000455383 CSB-PGBD3P0DP91 1061 aa26.76■■□□□ 1.87
MSH6-206ENST00000455383 USP31Q70CQ4 1352 aa26.75■■□□□ 1.87
MSH6-206ENST00000455383 SBNO2Q9Y2G9 1366 aa26.75■■□□□ 1.87
MSH6-206ENST00000455383 MON2Q7Z3U7 1717 aa26.75■■□□□ 1.87
MSH6-206ENST00000455383 EXOC5O00471 708 aa26.74■■□□□ 1.87
MSH6-206ENST00000455383 YY1P25490 414 aa26.74■■□□□ 1.87
MSH6-206ENST00000455383 USP54Q70EL1 1684 aa26.73■■□□□ 1.87
MSH6-206ENST00000455383 PDGFDQ9GZP0 370 aaPredicted RBP26.73■■□□□ 1.87
MSH6-206ENST00000455383 TXNRD1Q16881 649 aa26.72■■□□□ 1.87
MSH6-206ENST00000455383 TNS2Q63HR2 1409 aa26.72■■□□□ 1.87
MSH6-206ENST00000455383 NEUROD1Q13562 356 aa26.71■■□□□ 1.87
MSH6-206ENST00000455383 CD163L1Q9NR16 1453 aa26.7■■□□□ 1.87
MSH6-206ENST00000455383 ERBB3P21860 1342 aa26.67■■□□□ 1.86
MSH6-206ENST00000455383 PTGER2P43116 358 aa26.67■■□□□ 1.86
MSH6-206ENST00000455383 SLC15A2Q16348 729 aa26.66■■□□□ 1.86
MSH6-206ENST00000455383 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.66■■□□□ 1.86
MSH6-206ENST00000455383 NHSQ6T4R5 1651 aa26.66■■□□□ 1.86
MSH6-206ENST00000455383 DCAF8L1A6NGE4 600 aa26.65■■□□□ 1.86
MSH6-206ENST00000455383 ZBTB7AO95365 584 aa26.65■■□□□ 1.86
MSH6-206ENST00000455383 NME9Q86XW9 330 aa26.65■■□□□ 1.86
MSH6-206ENST00000455383 STK32BQ9NY57 414 aa26.65■■□□□ 1.86
MSH6-206ENST00000455383 MYOM1P52179 1685 aa26.63■■□□□ 1.85
MSH6-206ENST00000455383 IL2RBP14784 551 aa26.6■■□□□ 1.85
MSH6-206ENST00000455383 CARD11Q9BXL7 1154 aa26.6■■□□□ 1.85
MSH6-206ENST00000455383 NLRP2Q9NX02 1062 aa26.6■■□□□ 1.85
MSH6-206ENST00000455383 ATF5Q9Y2D1 282 aaPredicted RBP26.6■■□□□ 1.85
MSH6-206ENST00000455383 LTN1O94822 1766 aa26.6■■□□□ 1.85
MSH6-206ENST00000455383 EDC4Q6P2E9 1401 aaKnown RBP26.59■■□□□ 1.85
MSH6-206ENST00000455383 PAPPAQ13219 1627 aa26.59■■□□□ 1.85
MSH6-206ENST00000455383 SGIP1Q9BQI5 828 aa26.59■■□□□ 1.85
MSH6-206ENST00000455383 SLC12A5Q9H2X9 1139 aa26.59■■□□□ 1.85
MSH6-206ENST00000455383 HDGFL2Q7Z4V5 671 aaPredicted RBP26.58■■□□□ 1.85
MSH6-206ENST00000455383 ANKRD24Q8TF21 1146 aa26.58■■□□□ 1.85
MSH6-206ENST00000455383 ACSBG1Q96GR2 724 aa26.58■■□□□ 1.85
MSH6-206ENST00000455383 PUS7Q96PZ0 661 aaKnown RBP26.58■■□□□ 1.85
MSH6-206ENST00000455383 MTFR1LQ9H019 292 aa26.58■■□□□ 1.85
MSH6-206ENST00000455383 TMC1Q8TDI8 760 aa26.57■■□□□ 1.84
MSH6-206ENST00000455383 A0A1W2PP64 1363 aa26.55■■□□□ 1.84
MSH6-206ENST00000455383 SYT17Q9BSW7 474 aa26.54■■□□□ 1.84
MSH6-206ENST00000455383 FHDC1Q9C0D6 1143 aaPredicted RBP26.53■■□□□ 1.84
MSH6-206ENST00000455383 TERF2IPQ9NYB0 399 aa26.53■■□□□ 1.84
MSH6-206ENST00000455383 BTAF1O14981 1849 aa26.53■■□□□ 1.84
MSH6-206ENST00000455383 IP6K1Q92551 441 aa26.51■■□□□ 1.83
MSH6-206ENST00000455383 LRRC4BQ9NT99 713 aa26.49■■□□□ 1.83
MSH6-206ENST00000455383 ZNF827Q17R98 1081 aa26.48■■□□□ 1.83
MSH6-206ENST00000455383 MAP3K5Q99683 1374 aa26.47■■□□□ 1.83
MSH6-206ENST00000455383 FAM208AQ9UK61 1670 aaKnown RBP26.47■■□□□ 1.83
MSH6-206ENST00000455383 UTRNP46939 3433 aa26.45■■□□□ 1.83
MSH6-206ENST00000455383 AKT1S1Q96B36 256 aa26.45■■□□□ 1.82
MSH6-206ENST00000455383 ARXQ96QS3 562 aa26.45■■□□□ 1.82
MSH6-206ENST00000455383 TESK2Q96S53 571 aa26.45■■□□□ 1.82
MSH6-206ENST00000455383 SLC27A3Q5K4L6 730 aa26.43■■□□□ 1.82
MSH6-206ENST00000455383 TONSLQ96HA7 1378 aa26.42■■□□□ 1.82
MSH6-206ENST00000455383 MAP3K19Q56UN5 1328 aa26.41■■□□□ 1.82
MSH6-206ENST00000455383 ZNF784Q8NCA9 323 aaPredicted RBP26.41■■□□□ 1.82
MSH6-206ENST00000455383 DDX54Q8TDD1 881 aaKnown RBP26.41■■□□□ 1.82
MSH6-206ENST00000455383 QSER1Q2KHR3 1735 aa26.41■■□□□ 1.82
MSH6-206ENST00000455383 HOXC9P31274 260 aa26.4■■□□□ 1.82
MSH6-206ENST00000455383 LTV1Q96GA3 475 aaPredicted RBP26.4■■□□□ 1.82
MSH6-206ENST00000455383 KAT6BQ8WYB5 2073 aa26.39■■□□□ 1.82
MSH6-206ENST00000455383 SLC16A10Q8TF71 515 aa26.39■■□□□ 1.82
MSH6-206ENST00000455383 COG3Q96JB2 828 aa26.39■■□□□ 1.82
MSH6-206ENST00000455383 COL24A1Q17RW2 1714 aa26.39■■□□□ 1.81
MSH6-206ENST00000455383 ANKRD36BQ8N2N9 1353 aa26.38■■□□□ 1.81
MSH6-206ENST00000455383 ST20-MTHFSA0A0A6YYL1 179 aa26.37■■□□□ 1.81
MSH6-206ENST00000455383 NSD2O96028 1365 aa26.36■■□□□ 1.81
MSH6-206ENST00000455383 SHANK3Q9BYB0 1731 aa26.36■■□□□ 1.81
MSH6-206ENST00000455383 PNPLA7Q6ZV29 1317 aa26.36■■□□□ 1.81
MSH6-206ENST00000455383 SLC24A1O60721 1099 aa26.35■■□□□ 1.81
MSH6-206ENST00000455383 FBLN1P23142 703 aa26.35■■□□□ 1.81
MSH6-206ENST00000455383 PRIM1P49642 420 aaKnown RBP26.35■■□□□ 1.81
MSH6-206ENST00000455383 CHD4Q14839 1912 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms