RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 CD109Q6YHK3 1445 aa6.52□□□□□ -1.37
RBM39-220ENST00000455343 SIAH2O43255 324 aa6.52□□□□□ -1.37
RBM39-220ENST00000455343 SH3BP2P78314 561 aa6.52□□□□□ -1.37
RBM39-220ENST00000455343 KCNH2Q12809 1159 aa6.52□□□□□ -1.37
RBM39-220ENST00000455343 SLC24A3Q9HC58 644 aa6.52□□□□□ -1.37
RBM39-220ENST00000455343 WDR7Q9Y4E6 1490 aa6.52□□□□□ -1.37
RBM39-220ENST00000455343 CUL7Q14999 1698 aa6.52□□□□□ -1.37
RBM39-220ENST00000455343 CFAP99D6REC4 459 aa6.51□□□□□ -1.37
RBM39-220ENST00000455343 HRCP23327 699 aa6.51□□□□□ -1.37
RBM39-220ENST00000455343 PRPF38BQ5VTL8 546 aaKnown RBP6.51□□□□□ -1.37
RBM39-220ENST00000455343 RIC3Q7Z5B4 369 aa6.51□□□□□ -1.37
RBM39-220ENST00000455343 ZBTB3Q9H5J0 574 aa6.51□□□□□ -1.37
RBM39-220ENST00000455343 IQGAP2Q13576 1575 aa6.51□□□□□ -1.37
RBM39-220ENST00000455343 ALDH1A1P00352 501 aa6.5□□□□□ -1.37
RBM39-220ENST00000455343 LINC01559Q495D7 138 aa6.5□□□□□ -1.37
RBM39-220ENST00000455343 MYSM1Q5VVJ2 828 aa6.5□□□□□ -1.37
RBM39-220ENST00000455343 LYPD8Q6UX82 237 aa6.5□□□□□ -1.37
RBM39-220ENST00000455343 ATP13A2Q9NQ11 1180 aa6.5□□□□□ -1.37
RBM39-220ENST00000455343 UGGT2Q9NYU1 1516 aa6.5□□□□□ -1.37
RBM39-220ENST00000455343 PTPRMP28827 1452 aa6.49□□□□□ -1.37
RBM39-220ENST00000455343 C11orf95C9JLR9 678 aaPredicted RBP6.49□□□□□ -1.37
RBM39-220ENST00000455343 ZNF511Q8NB15 262 aa6.49□□□□□ -1.37
RBM39-220ENST00000455343 CABLES1Q8TDN4 633 aa6.49□□□□□ -1.37
RBM39-220ENST00000455343 BAP1Q92560 729 aa6.49□□□□□ -1.37
RBM39-220ENST00000455343 LIMD1Q9UGP4 676 aa6.49□□□□□ -1.37
RBM39-220ENST00000455343 ARAP3Q8WWN8 1544 aa6.49□□□□□ -1.37
RBM39-220ENST00000455343 F12P00748 615 aaPredicted RBP6.48□□□□□ -1.37
RBM39-220ENST00000455343 CSPP1Q1MSJ5 1256 aa6.48□□□□□ -1.37
RBM39-220ENST00000455343 TUSC1Q2TAM9 212 aa6.48□□□□□ -1.37
RBM39-220ENST00000455343 TLL2Q9Y6L7 1015 aa6.48□□□□□ -1.37
RBM39-220ENST00000455343 ZCCHC11Q5TAX3 1644 aaKnown RBP6.47□□□□□ -1.37
RBM39-220ENST00000455343 PHLDB1Q86UU1 1377 aa6.47□□□□□ -1.37
RBM39-220ENST00000455343 CTHP32929 405 aa6.47□□□□□ -1.37
RBM39-220ENST00000455343 QPCTQ16769 361 aa6.47□□□□□ -1.37
RBM39-220ENST00000455343 MAP10Q9P2G4 905 aa6.47□□□□□ -1.37
RBM39-220ENST00000455343 LMTK3Q96Q04 1460 aa6.47□□□□□ -1.37
RBM39-220ENST00000455343 LILRB3O75022 631 aa6.46□□□□□ -1.38
RBM39-220ENST00000455343 VARSP26640 1264 aaKnown RBP6.46□□□□□ -1.38
RBM39-220ENST00000455343 LCE2AQ5TA79 106 aaPredicted RBP6.46□□□□□ -1.38
RBM39-220ENST00000455343 TRIM47Q96LD4 638 aa6.46□□□□□ -1.38
RBM39-220ENST00000455343 SENP2Q9HC62 589 aa6.46□□□□□ -1.38
RBM39-220ENST00000455343 WASF2Q9Y6W5 498 aa6.46□□□□□ -1.38
RBM39-220ENST00000455343 RAPGEF2Q9Y4G8 1499 aa6.46□□□□□ -1.38
RBM39-220ENST00000455343 RAPGEF3O95398 923 aa6.45□□□□□ -1.38
RBM39-220ENST00000455343 SNRPBP14678 240 aaKnown RBP6.45□□□□□ -1.38
RBM39-220ENST00000455343 TREML4Q6UXN2 200 aa6.45□□□□□ -1.38
RBM39-220ENST00000455343 KIAA0556O60303 1618 aa6.45□□□□□ -1.38
RBM39-220ENST00000455343 PCF11O94913 1555 aaKnown RBP6.44□□□□□ -1.38
RBM39-220ENST00000455343 SOCS7O14512 581 aa6.44□□□□□ -1.38
RBM39-220ENST00000455343 PER1O15534 1290 aaPredicted RBP6.44□□□□□ -1.38
RBM39-220ENST00000455343 CLK2P49760 499 aaKnown RBP6.44□□□□□ -1.38
RBM39-220ENST00000455343 ILDR2Q71H61 639 aa6.44□□□□□ -1.38
RBM39-220ENST00000455343 MPNDQ8N594 471 aa6.44□□□□□ -1.38
RBM39-220ENST00000455343 KIFC2Q96AC6 838 aa6.44□□□□□ -1.38
RBM39-220ENST00000455343 ADAMTSL3P82987 1691 aa6.44□□□□□ -1.38
RBM39-220ENST00000455343 ABCA8O94911 1581 aa6.44□□□□□ -1.38
RBM39-220ENST00000455343 PLEKHG3A1L390 1219 aa6.43□□□□□ -1.38
RBM39-220ENST00000455343 NUTM2BA6NNL0 878 aaPredicted RBP6.43□□□□□ -1.38
RBM39-220ENST00000455343 NUTM2EB1AL46 878 aaPredicted RBP6.43□□□□□ -1.38
RBM39-220ENST00000455343 CAPN5O15484 640 aaPredicted RBP6.43□□□□□ -1.38
RBM39-220ENST00000455343 NUTM2DQ5VT03 806 aaPredicted RBP6.43□□□□□ -1.38
RBM39-220ENST00000455343 NUTM2AQ8IVF1 878 aaPredicted RBP6.43□□□□□ -1.38
RBM39-220ENST00000455343 TSC1Q92574 1164 aa6.43□□□□□ -1.38
RBM39-220ENST00000455343 CFAP43Q8NDM7 1665 aa6.42□□□□□ -1.38
RBM39-220ENST00000455343 BMP1P13497 986 aa6.42□□□□□ -1.38
RBM39-220ENST00000455343 HSPA2P54652 639 aa6.42□□□□□ -1.38
RBM39-220ENST00000455343 NFX1Q12986 1120 aaKnown RBP6.42□□□□□ -1.38
RBM39-220ENST00000455343 NNTQ13423 1086 aa6.42□□□□□ -1.38
RBM39-220ENST00000455343 RTL5Q5HYW3 569 aaPredicted RBP6.42□□□□□ -1.38
RBM39-220ENST00000455343 TRIM46Q7Z4K8 759 aa6.42□□□□□ -1.38
RBM39-220ENST00000455343 FAM174AQ8TBP5 190 aa6.42□□□□□ -1.38
RBM39-220ENST00000455343 FOXJ1Q92949 421 aa6.42□□□□□ -1.38
RBM39-220ENST00000455343 KIF21BO75037 1637 aa6.42□□□□□ -1.38
RBM39-220ENST00000455343 ATP10BO94823 1461 aa6.41□□□□□ -1.38
RBM39-220ENST00000455343 GOLGA3Q08378 1498 aa6.41□□□□□ -1.38
RBM39-220ENST00000455343 NEO1Q92859 1461 aa6.41□□□□□ -1.38
RBM39-220ENST00000455343 WFS1O76024 890 aa6.41□□□□□ -1.38
RBM39-220ENST00000455343 HELBQ8NG08 1087 aaPredicted RBP6.41□□□□□ -1.38
RBM39-220ENST00000455343 RSPH6AQ9H0K4 717 aa6.41□□□□□ -1.38
RBM39-220ENST00000455343 ADH1CP00326 375 aa6.4□□□□□ -1.38
RBM39-220ENST00000455343 C4orf48Q5BLP8 95 aa6.4□□□□□ -1.38
RBM39-220ENST00000455343 CDK15Q96Q40 435 aa6.4□□□□□ -1.38
RBM39-220ENST00000455343 POLR3EQ9NVU0 708 aa6.4□□□□□ -1.38
RBM39-220ENST00000455343 TIMP2P16035 220 aa6.39□□□□□ -1.39
RBM39-220ENST00000455343 BPHLQ86WA6 291 aaPredicted RBP6.39□□□□□ -1.39
RBM39-220ENST00000455343 ARMC2Q8NEN0 867 aa6.39□□□□□ -1.39
RBM39-220ENST00000455343 BCANQ96GW7 911 aa6.39□□□□□ -1.39
RBM39-220ENST00000455343 GPBP1L1Q9HC44 474 aaPredicted RBP6.39□□□□□ -1.39
RBM39-220ENST00000455343 ARID4BQ4LE39 1312 aaPredicted RBP6.39□□□□□ -1.39
RBM39-220ENST00000455343 AGERQ15109 404 aa6.38□□□□□ -1.39
RBM39-220ENST00000455343 SH3D19Q5HYK7 790 aa6.38□□□□□ -1.39
RBM39-220ENST00000455343 NBPF14Q5TI25 921 aa6.38□□□□□ -1.39
RBM39-220ENST00000455343 C1QTNF2Q9BXJ5 285 aa6.38□□□□□ -1.39
RBM39-220ENST00000455343 KDM4CQ9H3R0 1056 aa6.38□□□□□ -1.39
RBM39-220ENST00000455343 DISP3Q9P2K9 1392 aa6.38□□□□□ -1.39
RBM39-220ENST00000455343 FHOD3Q2V2M9 1422 aa6.38□□□□□ -1.39
RBM39-220ENST00000455343 MADDQ8WXG6 1647 aa6.38□□□□□ -1.39
RBM39-220ENST00000455343 BCORL1Q5H9F3 1711 aa6.38□□□□□ -1.39
RBM39-220ENST00000455343 ABCA9Q8IUA7 1624 aa6.37□□□□□ -1.39
RBM39-220ENST00000455343 PRXQ9BXM0 1461 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms