RNA–Protein interactions for RNA: ENST00000454258.2

AC006539.3-201, humanhuman

BASIC

Gene AC006539.3, Length 129 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006539.3-201ENST00000454258 CLTCL1P53675 1640 aa4.26□□□□□ -1.73
AC006539.3-201ENST00000454258 ABCA9Q8IUA7 1624 aa4.26□□□□□ -1.73
AC006539.3-201ENST00000454258 RIMBP3Q9UFD9 1639 aa4.26□□□□□ -1.73
AC006539.3-201ENST00000454258 SOX12O15370 315 aa4.26□□□□□ -1.73
AC006539.3-201ENST00000454258 IPO8O15397 1037 aaKnown RBP4.26□□□□□ -1.73
AC006539.3-201ENST00000454258 MCM2P49736 904 aa4.26□□□□□ -1.73
AC006539.3-201ENST00000454258 FTSJ3Q8IY81 847 aaKnown RBP4.26□□□□□ -1.73
AC006539.3-201ENST00000454258 EFCAB3Q8N7B9 438 aa4.26□□□□□ -1.73
AC006539.3-201ENST00000454258 AK7Q96M32 723 aa4.26□□□□□ -1.73
AC006539.3-201ENST00000454258 FEZ1Q99689 392 aa4.26□□□□□ -1.73
AC006539.3-201ENST00000454258 ZKSCAN5Q9Y2L8 839 aa4.26□□□□□ -1.73
AC006539.3-201ENST00000454258 CCDC61Q9Y6R9 512 aa4.26□□□□□ -1.73
AC006539.3-201ENST00000454258 ADGRB2O60241 1585 aa4.26□□□□□ -1.73
AC006539.3-201ENST00000454258 SETBP1Q9Y6X0 1596 aa4.26□□□□□ -1.73
AC006539.3-201ENST00000454258 ARAP3Q8WWN8 1544 aa4.26□□□□□ -1.73
AC006539.3-201ENST00000454258 USP19O94966 1318 aa4.25□□□□□ -1.73
AC006539.3-201ENST00000454258 PLA2R1Q13018 1463 aa4.25□□□□□ -1.73
AC006539.3-201ENST00000454258 UQCRHLA0A096LP55 91 aa4.25□□□□□ -1.73
AC006539.3-201ENST00000454258 GOLGA6L6A8MZA4 724 aa4.25□□□□□ -1.73
AC006539.3-201ENST00000454258 RTEL1-TNFRSF6BF6WH68 1400 aa4.25□□□□□ -1.73
AC006539.3-201ENST00000454258 K7ELQ4 463 aaPredicted RBP4.25□□□□□ -1.73
AC006539.3-201ENST00000454258 ST18O60284 1047 aa4.25□□□□□ -1.73
AC006539.3-201ENST00000454258 ABCA8O94911 1581 aa4.25□□□□□ -1.73
AC006539.3-201ENST00000454258 UQCRHP07919 91 aa4.25□□□□□ -1.73
AC006539.3-201ENST00000454258 PPP2R1AP30153 589 aa4.25□□□□□ -1.73
AC006539.3-201ENST00000454258 GTF2F1P35269 517 aaKnown RBP eCLIP4.25□□□□□ -1.73
AC006539.3-201ENST00000454258 DMTNQ08495 405 aa4.25□□□□□ -1.73
AC006539.3-201ENST00000454258 DHX8Q14562 1220 aaKnown RBP4.25□□□□□ -1.73
AC006539.3-201ENST00000454258 RABEP1Q15276 862 aa4.25□□□□□ -1.73
AC006539.3-201ENST00000454258 BMP2KLQ5H9B9 411 aa4.25□□□□□ -1.73
AC006539.3-201ENST00000454258 FRMPD1Q5SYB0 1578 aa4.25□□□□□ -1.73
AC006539.3-201ENST00000454258 ZKSCAN2Q63HK3 967 aa4.25□□□□□ -1.73
AC006539.3-201ENST00000454258 SMYD5Q6GMV2 418 aa4.25□□□□□ -1.73
AC006539.3-201ENST00000454258 CAVIN1Q6NZI2 390 aaKnown RBP4.25□□□□□ -1.73
AC006539.3-201ENST00000454258 SAMD9LQ8IVG5 1584 aa4.25□□□□□ -1.73
AC006539.3-201ENST00000454258 CCDC82Q8N4S0 544 aa4.25□□□□□ -1.73
AC006539.3-201ENST00000454258 KCTD17Q8N5Z5 321 aa4.25□□□□□ -1.73
AC006539.3-201ENST00000454258 PDLIM2Q96JY6 352 aa4.25□□□□□ -1.73
AC006539.3-201ENST00000454258 TRAIPQ9BWF2 469 aa4.25□□□□□ -1.73
AC006539.3-201ENST00000454258 CABP2Q9NPB3 220 aa4.25□□□□□ -1.73
AC006539.3-201ENST00000454258 PHF8Q9UPP1 1060 aa4.25□□□□□ -1.73
AC006539.3-201ENST00000454258 DISP3Q9P2K9 1392 aa4.25□□□□□ -1.73
AC006539.3-201ENST00000454258 IL16Q14005 1332 aa4.24□□□□□ -1.73
AC006539.3-201ENST00000454258 DDIT3P35638 169 aa4.24□□□□□ -1.73
AC006539.3-201ENST00000454258 SLC4A3P48751 1232 aa4.24□□□□□ -1.73
AC006539.3-201ENST00000454258 GABPB1Q06547 395 aaPredicted RBP4.24□□□□□ -1.73
AC006539.3-201ENST00000454258 SLC20A2Q08357 652 aa4.24□□□□□ -1.73
AC006539.3-201ENST00000454258 MVPQ14764 893 aaKnown RBP4.24□□□□□ -1.73
AC006539.3-201ENST00000454258 SYCP1Q15431 976 aa4.24□□□□□ -1.73
AC006539.3-201ENST00000454258 UVSSAQ2YD98 709 aa4.24□□□□□ -1.73
AC006539.3-201ENST00000454258 IFNL1Q8IU54 200 aa4.24□□□□□ -1.73
AC006539.3-201ENST00000454258 GCC1Q96CN9 775 aa4.24□□□□□ -1.73
AC006539.3-201ENST00000454258 CDCA7LQ96GN5 454 aa4.24□□□□□ -1.73
AC006539.3-201ENST00000454258 PUS7Q96PZ0 661 aaKnown RBP4.24□□□□□ -1.73
AC006539.3-201ENST00000454258 TESK2Q96S53 571 aa4.24□□□□□ -1.73
AC006539.3-201ENST00000454258 LARP6Q9BRS8 491 aaKnown RBP4.24□□□□□ -1.73
AC006539.3-201ENST00000454258 FAM117AQ9C073 453 aa4.24□□□□□ -1.73
AC006539.3-201ENST00000454258 MTMR7Q9Y216 660 aa4.24□□□□□ -1.73
AC006539.3-201ENST00000454258 DDX49Q9Y6V7 483 aaKnown RBP4.24□□□□□ -1.73
AC006539.3-201ENST00000454258 TET3O43151 1660 aa4.24□□□□□ -1.73
AC006539.3-201ENST00000454258 KIF24Q5T7B8 1368 aa4.24□□□□□ -1.73
AC006539.3-201ENST00000454258 DEPDC5O75140 1603 aa4.24□□□□□ -1.73
AC006539.3-201ENST00000454258 MED14O60244 1454 aa4.24□□□□□ -1.73
AC006539.3-201ENST00000454258 NCKAP5LQ9HCH0 1330 aa4.23□□□□□ -1.73
AC006539.3-201ENST00000454258 PLEKHG3A1L390 1219 aa4.23□□□□□ -1.73
AC006539.3-201ENST00000454258 TRIM66O15016 1216 aa4.23□□□□□ -1.73
AC006539.3-201ENST00000454258 EPB41L2O43491 1005 aaKnown RBP4.23□□□□□ -1.73
AC006539.3-201ENST00000454258 RAD21O60216 631 aa4.23□□□□□ -1.73
AC006539.3-201ENST00000454258 PLIN1O60240 522 aa4.23□□□□□ -1.73
AC006539.3-201ENST00000454258 PTMAP06454 111 aaKnown RBP4.23□□□□□ -1.73
AC006539.3-201ENST00000454258 NBPF1Q3BBV0 1214 aa4.23□□□□□ -1.73
AC006539.3-201ENST00000454258 CC2D1BQ5T0F9 858 aaKnown RBP4.23□□□□□ -1.73
AC006539.3-201ENST00000454258 RNF20Q5VTR2 975 aa4.23□□□□□ -1.73
AC006539.3-201ENST00000454258 MYRIPQ8NFW9 859 aa4.23□□□□□ -1.73
AC006539.3-201ENST00000454258 RUNDC1Q96C34 613 aa4.23□□□□□ -1.73
AC006539.3-201ENST00000454258 PANK3Q9H999 370 aa4.23□□□□□ -1.73
AC006539.3-201ENST00000454258 ADAMTS8Q9UP79 889 aa4.23□□□□□ -1.73
AC006539.3-201ENST00000454258 ATP6V1DQ9Y5K8 247 aa4.23□□□□□ -1.73
AC006539.3-201ENST00000454258 ANKRD36BQ8N2N9 1353 aa4.23□□□□□ -1.73
AC006539.3-201ENST00000454258 PPIP5K1Q6PFW1 1433 aa4.22□□□□□ -1.73
AC006539.3-201ENST00000454258 TRAPPC8Q9Y2L5 1435 aa4.22□□□□□ -1.73
AC006539.3-201ENST00000454258 ABCA6Q8N139 1617 aa4.22□□□□□ -1.73
AC006539.3-201ENST00000454258 CHD1O14646 1710 aa4.22□□□□□ -1.73
AC006539.3-201ENST00000454258 PLEKHD1A6NEE1 506 aa4.22□□□□□ -1.73
AC006539.3-201ENST00000454258 A6NJR5 290 aa4.22□□□□□ -1.73
AC006539.3-201ENST00000454258 REC8O95072 547 aa4.22□□□□□ -1.73
AC006539.3-201ENST00000454258 MCCP23508 829 aa4.22□□□□□ -1.73
AC006539.3-201ENST00000454258 FGD1P98174 961 aa4.22□□□□□ -1.73
AC006539.3-201ENST00000454258 PDE4DQ08499 809 aa4.22□□□□□ -1.73
AC006539.3-201ENST00000454258 MFSD10Q14728 455 aa4.22□□□□□ -1.73
AC006539.3-201ENST00000454258 TNPO1Q92973 898 aaKnown RBP4.22□□□□□ -1.73
AC006539.3-201ENST00000454258 PANK2Q9BZ23 570 aa4.22□□□□□ -1.73
AC006539.3-201ENST00000454258 GZF1Q9H116 711 aaPredicted RBP4.22□□□□□ -1.73
AC006539.3-201ENST00000454258 FAM13BQ9NYF5 915 aa4.22□□□□□ -1.73
AC006539.3-201ENST00000454258 USP25Q9UHP3 1055 aa4.22□□□□□ -1.73
AC006539.3-201ENST00000454258 PRDM4Q9UKN5 801 aa4.22□□□□□ -1.73
AC006539.3-201ENST00000454258 ARIH1Q9Y4X5 557 aaPredicted RBP4.22□□□□□ -1.73
AC006539.3-201ENST00000454258 SHPRHQ149N8 1683 aa4.22□□□□□ -1.73
AC006539.3-201ENST00000454258 SSH2Q76I76 1423 aa4.21□□□□□ -1.73
AC006539.3-201ENST00000454258 MAP3K4Q9Y6R4 1608 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms