RNA–Protein interactions for RNA: ENST00000454035.5

MDH1-208, Transcript of malate dehydrogenase 1, humanhuman

TSL 3

Gene MDH1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-208ENST00000454035 MKRN3Q13064 507 aaKnown RBP8.47□□□□□ -1.05
MDH1-208ENST00000454035 NBPF1Q3BBV0 1214 aa8.47□□□□□ -1.05
MDH1-208ENST00000454035 UPF1Q92900 1129 aaKnown RBP eCLIP8.47□□□□□ -1.05
MDH1-208ENST00000454035 DLC1Q96QB1 1528 aa8.47□□□□□ -1.05
MDH1-208ENST00000454035 LRP6O75581 1613 aa8.47□□□□□ -1.05
MDH1-208ENST00000454035 NALCNQ8IZF0 1738 aa8.46□□□□□ -1.05
MDH1-208ENST00000454035 PPP1R15BQ5SWA1 713 aa8.46□□□□□ -1.06
MDH1-208ENST00000454035 BRINP3Q76B58 766 aa8.46□□□□□ -1.06
MDH1-208ENST00000454035 IL27Q8NEV9 243 aa8.46□□□□□ -1.06
MDH1-208ENST00000454035 PRAM1Q96QH2 718 aa8.46□□□□□ -1.06
MDH1-208ENST00000454035 DAXXQ9UER7 740 aaPredicted RBP8.46□□□□□ -1.06
MDH1-208ENST00000454035 TRAK1Q9UPV9 953 aa8.46□□□□□ -1.06
MDH1-208ENST00000454035 SHPRHQ149N8 1683 aa8.46□□□□□ -1.06
MDH1-208ENST00000454035 C1orf167Q5SNV9 1468 aa8.45□□□□□ -1.06
MDH1-208ENST00000454035 CLSPNQ9HAW4 1339 aa8.45□□□□□ -1.06
MDH1-208ENST00000454035 KIAA1210Q9ULL0 1709 aa8.45□□□□□ -1.06
MDH1-208ENST00000454035 ST18O60284 1047 aa8.44□□□□□ -1.06
MDH1-208ENST00000454035 NBPF8Q3BBV2 869 aa8.44□□□□□ -1.06
MDH1-208ENST00000454035 MEX3CQ5U5Q3 659 aaKnown RBP8.44□□□□□ -1.06
MDH1-208ENST00000454035 GPHNQ9NQX3 736 aaPredicted RBP8.44□□□□□ -1.06
MDH1-208ENST00000454035 POGKQ9P215 609 aa8.44□□□□□ -1.06
MDH1-208ENST00000454035 JCADQ9P266 1359 aa8.44□□□□□ -1.06
MDH1-208ENST00000454035 CDC42BPGQ6DT37 1551 aa8.44□□□□□ -1.06
MDH1-208ENST00000454035 POTEFA5A3E0 1075 aa8.43□□□□□ -1.06
MDH1-208ENST00000454035 DPYSL4O14531 572 aa8.43□□□□□ -1.06
MDH1-208ENST00000454035 ATN1P54259 1190 aaPredicted RBP8.43□□□□□ -1.06
MDH1-208ENST00000454035 ORAI2Q96SN7 254 aa8.43□□□□□ -1.06
MDH1-208ENST00000454035 TONSLQ96HA7 1378 aa8.43□□□□□ -1.06
MDH1-208ENST00000454035 SAFB2Q14151 953 aaKnown RBP eCLIP8.42□□□□□ -1.06
MDH1-208ENST00000454035 KDM4CQ9H3R0 1056 aa8.42□□□□□ -1.06
MDH1-208ENST00000454035 EMILIN3Q9NT22 766 aa8.42□□□□□ -1.06
MDH1-208ENST00000454035 AHDC1Q5TGY3 1603 aaPredicted RBP8.42□□□□□ -1.06
MDH1-208ENST00000454035 GPRASP1Q5JY77 1395 aa8.41□□□□□ -1.06
MDH1-208ENST00000454035 TRIM66O15016 1216 aa8.41□□□□□ -1.06
MDH1-208ENST00000454035 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.41□□□□□ -1.064e-11■□□□□ 8.9
MDH1-208ENST00000454035 SOS2Q07890 1332 aaPredicted RBP8.4□□□□□ -1.06
MDH1-208ENST00000454035 MINK1Q8N4C8 1332 aaPredicted RBP8.4□□□□□ -1.06
MDH1-208ENST00000454035 NUTM2BA6NNL0 878 aaPredicted RBP8.4□□□□□ -1.06
MDH1-208ENST00000454035 NUTM2EB1AL46 878 aaPredicted RBP8.4□□□□□ -1.06
MDH1-208ENST00000454035 WASLO00401 505 aaPredicted RBP8.4□□□□□ -1.06
MDH1-208ENST00000454035 PDE4DQ08499 809 aa8.4□□□□□ -1.06
MDH1-208ENST00000454035 DSG2Q14126 1118 aa8.4□□□□□ -1.06
MDH1-208ENST00000454035 ESCO1Q5FWF5 840 aa8.4□□□□□ -1.06
MDH1-208ENST00000454035 NUTM2AQ8IVF1 878 aaPredicted RBP8.4□□□□□ -1.06
MDH1-208ENST00000454035 DDX17Q92841 729 aaKnown RBP8.4□□□□□ -1.06
MDH1-208ENST00000454035 HIRIP3Q9BW71 556 aaPredicted RBP8.4□□□□□ -1.06
MDH1-208ENST00000454035 ARHGEF28Q8N1W1 1705 aaKnown RBP8.4□□□□□ -1.07
MDH1-208ENST00000454035 TRPM1Q7Z4N2 1603 aa8.4□□□□□ -1.07
MDH1-208ENST00000454035 ADGRB2O60241 1585 aa8.39□□□□□ -1.07
MDH1-208ENST00000454035 SRCAPQ6ZRS2 3230 aa8.39□□□□□ -1.07
MDH1-208ENST00000454035 ROCK2O75116 1388 aaKnown RBP8.39□□□□□ -1.07
MDH1-208ENST00000454035 NUTM2FA1L443 756 aa8.39□□□□□ -1.07
MDH1-208ENST00000454035 ZNF772Q68DY9 489 aaPredicted RBP8.39□□□□□ -1.07
MDH1-208ENST00000454035 LRRC59Q96AG4 307 aaKnown RBP8.39□□□□□ -1.07
MDH1-208ENST00000454035 FMN2Q9NZ56 1722 aa8.39□□□□□ -1.07
MDH1-208ENST00000454035 NHSL1Q5SYE7 1610 aa8.39□□□□□ -1.07
MDH1-208ENST00000454035 ANKARQ7Z5J8 1434 aa8.38□□□□□ -1.07
MDH1-208ENST00000454035 NPHP3Q7Z494 1330 aa8.38□□□□□ -1.07
MDH1-208ENST00000454035 PRR36Q9H6K5 1346 aa8.38□□□□□ -1.07
MDH1-208ENST00000454035 CENPJQ9HC77 1338 aaPredicted RBP8.38□□□□□ -1.07
MDH1-208ENST00000454035 SPDYE16A6NNV3 312 aaPredicted RBP8.38□□□□□ -1.07
MDH1-208ENST00000454035 FOXO3O43524 673 aa8.38□□□□□ -1.07
MDH1-208ENST00000454035 RXRBP28702 533 aa8.38□□□□□ -1.07
MDH1-208ENST00000454035 SPATA31A6Q5VVP1 1343 aa8.37□□□□□ -1.07
MDH1-208ENST00000454035 TTLL13PA6NNM8 815 aa8.37□□□□□ -1.07
MDH1-208ENST00000454035 PDIA6Q15084 440 aa8.37□□□□□ -1.07
MDH1-208ENST00000454035 DPY19L2Q6NUT2 758 aa8.37□□□□□ -1.07
MDH1-208ENST00000454035 CCER1Q8TC90 406 aaPredicted RBP8.37□□□□□ -1.07
MDH1-208ENST00000454035 CDK19Q9BWU1 502 aa8.37□□□□□ -1.07
MDH1-208ENST00000454035 RALGAPBQ86X10 1494 aa8.37□□□□□ -1.07
MDH1-208ENST00000454035 EIF3AQ14152 1382 aaKnown RBP8.36□□□□□ -1.07
MDH1-208ENST00000454035 AFF2P51816 1311 aa8.36□□□□□ -1.07
MDH1-208ENST00000454035 TULP4Q9NRJ4 1543 aa8.36□□□□□ -1.07
MDH1-208ENST00000454035 NUDT16Q96DE0 195 aaKnown RBP8.36□□□□□ -1.07
MDH1-208ENST00000454035 CARD11Q9BXL7 1154 aa8.36□□□□□ -1.07
MDH1-208ENST00000454035 PXDNQ92626 1479 aa8.36□□□□□ -1.07
MDH1-208ENST00000454035 USP32Q8NFA0 1604 aa8.36□□□□□ -1.07
MDH1-208ENST00000454035 TIE1P35590 1138 aa8.35□□□□□ -1.07
MDH1-208ENST00000454035 KRT28Q7Z3Y7 464 aa8.35□□□□□ -1.07
MDH1-208ENST00000454035 RGS12O14924 1447 aa8.35□□□□□ -1.07
MDH1-208ENST00000454035 PNPLA6Q8IY17 1366 aa8.35□□□□□ -1.07
MDH1-208ENST00000454035 SBNO2Q9Y2G9 1366 aa8.35□□□□□ -1.07
MDH1-208ENST00000454035 ATP7BP35670 1465 aa8.34□□□□□ -1.07
MDH1-208ENST00000454035 CDK12Q9NYV4 1490 aaPredicted RBP8.34□□□□□ -1.07
MDH1-208ENST00000454035 PLEKHG3A1L390 1219 aa8.34□□□□□ -1.07
MDH1-208ENST00000454035 GPR37O15354 613 aa8.34□□□□□ -1.07
MDH1-208ENST00000454035 PMFBP1Q8TBY8 1022 aa8.34□□□□□ -1.07
MDH1-208ENST00000454035 ZMYND15Q9H091 742 aa8.34□□□□□ -1.07
MDH1-208ENST00000454035 RGPD8O14715 1765 aaPredicted RBP8.34□□□□□ -1.07
MDH1-208ENST00000454035 KIF1AQ12756 1690 aa8.34□□□□□ -1.08
MDH1-208ENST00000454035 SPATA31A3Q5VYP0 1347 aa8.33□□□□□ -1.08
MDH1-208ENST00000454035 FOXK1P85037 733 aa8.33□□□□□ -1.08
MDH1-208ENST00000454035 XPCQ01831 940 aaPredicted RBP8.33□□□□□ -1.08
MDH1-208ENST00000454035 PSME1Q06323 249 aa8.33□□□□□ -1.08
MDH1-208ENST00000454035 MICALL2Q8IY33 904 aa8.33□□□□□ -1.08
MDH1-208ENST00000454035 TMC2Q8TDI7 906 aa8.33□□□□□ -1.08
MDH1-208ENST00000454035 FAM117AQ9C073 453 aa8.33□□□□□ -1.08
MDH1-208ENST00000454035 SBNO1A3KN83 1393 aa8.33□□□□□ -1.08
MDH1-208ENST00000454035 EVC2Q86UK5 1308 aa8.32□□□□□ -1.08
MDH1-208ENST00000454035 SRPK2P78362 688 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms