RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 ADGRB1O14514 1584 aa10.13□□□□□ -0.79
BRCC3-208ENST00000453705 KIF4AO95239 1232 aa10.13□□□□□ -0.79
BRCC3-208ENST00000453705 DDX10Q13206 875 aaKnown RBP10.13□□□□□ -0.79
BRCC3-208ENST00000453705 YEATS2Q9ULM3 1422 aa10.13□□□□□ -0.79
BRCC3-208ENST00000453705 USP32Q8NFA0 1604 aa10.13□□□□□ -0.79
BRCC3-208ENST00000453705 MYO5BQ9ULV0 1848 aa10.13□□□□□ -0.79
BRCC3-208ENST00000453705 PIK3C2GO75747 1445 aa10.12□□□□□ -0.79
BRCC3-208ENST00000453705 ANP32CO43423 234 aa10.12□□□□□ -0.79
BRCC3-208ENST00000453705 NOM1Q5C9Z4 860 aaKnown RBP10.12□□□□□ -0.79
BRCC3-208ENST00000453705 SETD1AO15047 1707 aaKnown RBP10.12□□□□□ -0.79
BRCC3-208ENST00000453705 WASHC2CQ9Y4E1 1318 aa10.12□□□□□ -0.79
BRCC3-208ENST00000453705 ARHGEF28Q8N1W1 1705 aaKnown RBP10.11□□□□□ -0.79
BRCC3-208ENST00000453705 KIF3BO15066 747 aa10.11□□□□□ -0.79
BRCC3-208ENST00000453705 DPH6Q7L8W6 267 aa10.11□□□□□ -0.79
BRCC3-208ENST00000453705 CLTCQ00610 1675 aaKnown RBP10.11□□□□□ -0.79
BRCC3-208ENST00000453705 ARHGEF1Q92888 912 aaKnown RBP10.11□□□□□ -0.79
BRCC3-208ENST00000453705 C11orf95C9JLR9 678 aaPredicted RBP10.1□□□□□ -0.79
BRCC3-208ENST00000453705 ERVK-7P63135 1459 aa10.1□□□□□ -0.79
BRCC3-208ENST00000453705 CREB3O43889 395 aa10.1□□□□□ -0.79
BRCC3-208ENST00000453705 RINLQ6ZS11 566 aa10.1□□□□□ -0.79
BRCC3-208ENST00000453705 ILDR2Q71H61 639 aa10.1□□□□□ -0.79
BRCC3-208ENST00000453705 DCAF11Q8TEB1 546 aa10.1□□□□□ -0.79
BRCC3-208ENST00000453705 MTA3Q9BTC8 594 aa10.1□□□□□ -0.79
BRCC3-208ENST00000453705 ZNF16P17020 682 aaPredicted RBP10.1□□□□□ -0.79
BRCC3-208ENST00000453705 RFX1P22670 979 aa10.1□□□□□ -0.79
BRCC3-208ENST00000453705 ZFYVE27Q5T4F4 411 aa10.1□□□□□ -0.79
BRCC3-208ENST00000453705 KNDC1Q76NI1 1749 aa10.09□□□□□ -0.79
BRCC3-208ENST00000453705 EIF3AQ14152 1382 aaKnown RBP10.09□□□□□ -0.79
BRCC3-208ENST00000453705 QRICH2Q9H0J4 1663 aa10.09□□□□□ -0.79
BRCC3-208ENST00000453705 ERICH6BQ5W0A0 696 aa10.09□□□□□ -0.79
BRCC3-208ENST00000453705 CARD11Q9BXL7 1154 aa10.09□□□□□ -0.79
BRCC3-208ENST00000453705 NPC1L1Q9UHC9 1359 aa10.08□□□□□ -0.8
BRCC3-208ENST00000453705 PDE6BP35913 854 aa10.08□□□□□ -0.8
BRCC3-208ENST00000453705 MORC4Q8TE76 937 aa10.08□□□□□ -0.8
BRCC3-208ENST00000453705 UBXN4Q92575 508 aa10.08□□□□□ -0.8
BRCC3-208ENST00000453705 TESK2Q96S53 571 aa10.08□□□□□ -0.8
BRCC3-208ENST00000453705 SPOCK3Q9BQ16 436 aa10.08□□□□□ -0.8
BRCC3-208ENST00000453705 NAALADL2Q58DX5 795 aa10.07□□□□□ -0.8
BRCC3-208ENST00000453705 DLC1Q96QB1 1528 aa10.06□□□□□ -0.8
BRCC3-208ENST00000453705 LONRF3Q496Y0 759 aa10.06□□□□□ -0.8
BRCC3-208ENST00000453705 SH3BP5O60239 455 aa10.06□□□□□ -0.8
BRCC3-208ENST00000453705 TSR1Q2NL82 804 aaKnown RBP10.06□□□□□ -0.8
BRCC3-208ENST00000453705 KRBA2Q6ZNG9 492 aa10.06□□□□□ -0.8
BRCC3-208ENST00000453705 PRKRIP1Q9H875 184 aaPredicted RBP10.06□□□□□ -0.8
BRCC3-208ENST00000453705 CCDC184Q52MB2 194 aa10.05□□□□□ -0.8
BRCC3-208ENST00000453705 ZNF330Q9Y3S2 320 aaPredicted RBP10.05□□□□□ -0.8
BRCC3-208ENST00000453705 GTF2E1P29083 439 aaPredicted RBP10.04□□□□□ -0.8
BRCC3-208ENST00000453705 COG6Q9Y2V7 657 aa10.04□□□□□ -0.8
BRCC3-208ENST00000453705 SUPT16HQ9Y5B9 1047 aaKnown RBP10.04□□□□□ -0.8
BRCC3-208ENST00000453705 CFAP65Q6ZU64 1925 aaKnown RBP10.04□□□□□ -0.8
BRCC3-208ENST00000453705 PARD3Q8TEW0 1356 aa10.04□□□□□ -0.8
BRCC3-208ENST00000453705 KAT6BQ8WYB5 2073 aa10.04□□□□□ -0.8
BRCC3-208ENST00000453705 CCDC194A0A1B0GVG4 234 aa10.04□□□□□ -0.8
BRCC3-208ENST00000453705 GPIHBP1Q8IV16 184 aa10.04□□□□□ -0.8
BRCC3-208ENST00000453705 PARP9Q8IXQ6 854 aa10.04□□□□□ -0.8
BRCC3-208ENST00000453705 ASXL1Q8IXJ9 1541 aa10.03□□□□□ -0.8
BRCC3-208ENST00000453705 MAMSTRQ6ZN01 415 aa10.03□□□□□ -0.8
BRCC3-208ENST00000453705 GGT6Q6P531 493 aa10.03□□□□□ -0.8
BRCC3-208ENST00000453705 BRD4O60885 1362 aaPredicted RBP10.02□□□□□ -0.8
BRCC3-208ENST00000453705 MLLT3P42568 568 aaPredicted RBP10.02□□□□□ -0.8
BRCC3-208ENST00000453705 MYBPC2Q14324 1141 aa10.02□□□□□ -0.8
BRCC3-208ENST00000453705 LARGE2Q8N3Y3 721 aa10.02□□□□□ -0.8
BRCC3-208ENST00000453705 UBR1Q8IWV7 1749 aa10.02□□□□□ -0.81
BRCC3-208ENST00000453705 ANKRD26Q9UPS8 1709 aa10.02□□□□□ -0.81
BRCC3-208ENST00000453705 ST20-MTHFSA0A0A6YYL1 179 aa10.02□□□□□ -0.81
BRCC3-208ENST00000453705 POM121CA8CG34 1229 aa10.02□□□□□ -0.81
BRCC3-208ENST00000453705 U2SURPO15042 1029 aaKnown RBP10.02□□□□□ -0.81
BRCC3-208ENST00000453705 TAGLNQ01995 201 aaKnown RBP10.02□□□□□ -0.81
BRCC3-208ENST00000453705 PSME1Q06323 249 aa10.02□□□□□ -0.81
BRCC3-208ENST00000453705 DDRGK1Q96HY6 314 aa10.02□□□□□ -0.81
BRCC3-208ENST00000453705 NRXN3Q9Y4C0 1643 aa10.02□□□□□ -0.81
BRCC3-208ENST00000453705 DISP3Q9P2K9 1392 aa10.01□□□□□ -0.81
BRCC3-208ENST00000453705 RHBDL3P58872 404 aa10.01□□□□□ -0.81
BRCC3-208ENST00000453705 GIPC2Q8TF65 315 aa10.01□□□□□ -0.81
BRCC3-208ENST00000453705 C14orf93Q9H972 538 aaKnown RBP10.01□□□□□ -0.81
BRCC3-208ENST00000453705 LRPPRCP42704 1394 aaKnown RBP10.01□□□□□ -0.81
BRCC3-208ENST00000453705 PHF14O94880 888 aa10□□□□□ -0.81
BRCC3-208ENST00000453705 SSFA2P28290 1259 aa10□□□□□ -0.81
BRCC3-208ENST00000453705 POLD1P28340 1107 aa10□□□□□ -0.81
BRCC3-208ENST00000453705 APLP1P51693 650 aa10□□□□□ -0.81
BRCC3-208ENST00000453705 TMX4Q9H1E5 349 aaPredicted RBP10□□□□□ -0.81
BRCC3-208ENST00000453705 NBPF1Q3BBV0 1214 aa10□□□□□ -0.81
BRCC3-208ENST00000453705 TSHZ1Q6ZSZ6 1077 aa10□□□□□ -0.81
BRCC3-208ENST00000453705 FAN1Q9Y2M0 1017 aa10□□□□□ -0.81
BRCC3-208ENST00000453705 MCCD1P59942 119 aaPredicted RBP10□□□□□ -0.81
BRCC3-208ENST00000453705 TMF1P82094 1093 aa10□□□□□ -0.81
BRCC3-208ENST00000453705 E2F4Q16254 413 aa10□□□□□ -0.81
BRCC3-208ENST00000453705 DNAJC14Q6Y2X3 702 aaPredicted RBP9.99□□□□□ -0.81
BRCC3-208ENST00000453705 A2ML1A8K2U0 1454 aa9.99□□□□□ -0.81
BRCC3-208ENST00000453705 PER1O15534 1290 aaPredicted RBP9.99□□□□□ -0.81
BRCC3-208ENST00000453705 CLEC4GQ6UXB4 293 aa9.99□□□□□ -0.81
BRCC3-208ENST00000453705 ARMCX6Q7L4S7 300 aa9.99□□□□□ -0.81
BRCC3-208ENST00000453705 ALKQ9UM73 1620 aa9.99□□□□□ -0.81
BRCC3-208ENST00000453705 FER1L4A9Z1Z3 1794 aa9.98□□□□□ -0.81
BRCC3-208ENST00000453705 ZC3H6P61129 1189 aaKnown RBP9.98□□□□□ -0.81
BRCC3-208ENST00000453705 C8orf37Q96NL8 207 aa9.98□□□□□ -0.81
BRCC3-208ENST00000453705 SMC5Q8IY18 1101 aa9.97□□□□□ -0.81
BRCC3-208ENST00000453705 G3BP2Q9UN86 482 aaKnown RBP9.97□□□□□ -0.81
BRCC3-208ENST00000453705 NINLQ9Y2I6 1382 aa9.97□□□□□ -0.81
BRCC3-208ENST00000453705 NLRP1Q9C000 1473 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms