RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 DISP3Q9P2K9 1392 aa9.28□□□□□ -0.92
RIF1-206ENST00000453091 LRRCC1Q9C099 1032 aa9.27□□□□□ -0.92
RIF1-206ENST00000453091 GRIN2BQ13224 1484 aa9.27□□□□□ -0.92
RIF1-206ENST00000453091 TNMDQ9H2S6 317 aa9.27□□□□□ -0.92
RIF1-206ENST00000453091 USP25Q9UHP3 1055 aa9.27□□□□□ -0.92
RIF1-206ENST00000453091 PLB1Q6P1J6 1458 aa9.27□□□□□ -0.93
RIF1-206ENST00000453091 TIAM1Q13009 1591 aa9.27□□□□□ -0.93
RIF1-206ENST00000453091 SPDYE4A6NLX3 237 aa9.27□□□□□ -0.93
RIF1-206ENST00000453091 MBD3O95983 291 aa9.27□□□□□ -0.93
RIF1-206ENST00000453091 BICDL1Q6ZP65 573 aa9.27□□□□□ -0.93
RIF1-206ENST00000453091 WDR63Q8IWG1 891 aa9.27□□□□□ -0.93
RIF1-206ENST00000453091 ARHGEF11O15085 1522 aa9.27□□□□□ -0.93
RIF1-206ENST00000453091 TSR1Q2NL82 804 aaKnown RBP9.27□□□□□ -0.93
RIF1-206ENST00000453091 C8orf34Q49A92 452 aa9.27□□□□□ -0.93
RIF1-206ENST00000453091 VPS37DQ86XT2 251 aa9.27□□□□□ -0.93
RIF1-206ENST00000453091 TMX4Q9H1E5 349 aaPredicted RBP9.27□□□□□ -0.93
RIF1-206ENST00000453091 CCDC34Q96HJ3 373 aa9.26□□□□□ -0.93
RIF1-206ENST00000453091 PDRG1Q9NUG6 133 aa9.26□□□□□ -0.93
RIF1-206ENST00000453091 CLASRPQ8N2M8 674 aaKnown RBP9.26□□□□□ -0.93
RIF1-206ENST00000453091 ZRANB1Q9UGI0 708 aa9.26□□□□□ -0.93
RIF1-206ENST00000453091 PIBF1Q8WXW3 757 aa9.26□□□□□ -0.93
RIF1-206ENST00000453091 LARP1BQ659C4 914 aaKnown RBP9.26□□□□□ -0.93
RIF1-206ENST00000453091 GUCY1B3Q02153 619 aa9.26□□□□□ -0.93
RIF1-206ENST00000453091 HDGFL1Q5TGJ6 251 aa9.26□□□□□ -0.93
RIF1-206ENST00000453091 CCDC30Q5VVM6 783 aa9.26□□□□□ -0.93
RIF1-206ENST00000453091 PRPF40BQ6NWY9 871 aaKnown RBP9.26□□□□□ -0.93
RIF1-206ENST00000453091 TOPBP1Q92547 1522 aa9.26□□□□□ -0.93
RIF1-206ENST00000453091 TPM1P09493 284 aa9.26□□□□□ -0.93
RIF1-206ENST00000453091 TRDNQ13061 729 aa9.26□□□□□ -0.93
RIF1-206ENST00000453091 TEX35Q5T0J7 233 aa9.26□□□□□ -0.93
RIF1-206ENST00000453091 ANKRD30BQ9BXX2 1392 aa9.25□□□□□ -0.93
RIF1-206ENST00000453091 DDX58O95786 925 aaKnown RBP9.25□□□□□ -0.93
RIF1-206ENST00000453091 XRCC6P12956 609 aaKnown RBP eCLIP9.25□□□□□ -0.938e-6■■□□□ 12.6
RIF1-206ENST00000453091 PIP4K2BP78356 416 aa9.25□□□□□ -0.93
RIF1-206ENST00000453091 ZNF530Q6P9A1 599 aaPredicted RBP9.25□□□□□ -0.93
RIF1-206ENST00000453091 AACSQ86V21 672 aa9.25□□□□□ -0.93
RIF1-206ENST00000453091 GPRASP1Q5JY77 1395 aa9.25□□□□□ -0.93
RIF1-206ENST00000453091 GNAI3P08754 354 aa9.25□□□□□ -0.93
RIF1-206ENST00000453091 STK38Q15208 465 aa9.25□□□□□ -0.93
RIF1-206ENST00000453091 ANXA1P04083 346 aa9.25□□□□□ -0.93
RIF1-206ENST00000453091 TRIM27P14373 513 aa9.25□□□□□ -0.93
RIF1-206ENST00000453091 ZSCAN30Q86W11 494 aa9.25□□□□□ -0.93
RIF1-206ENST00000453091 PCDHB15Q9Y5E8 787 aa9.25□□□□□ -0.93
RIF1-206ENST00000453091 CYP46A1Q9Y6A2 500 aa9.25□□□□□ -0.93
RIF1-206ENST00000453091 CKAP2LQ8IYA6 745 aa9.25□□□□□ -0.93
RIF1-206ENST00000453091 RALYLQ86SE5 291 aaKnown RBP9.25□□□□□ -0.93
RIF1-206ENST00000453091 NINLQ9Y2I6 1382 aa9.25□□□□□ -0.93
RIF1-206ENST00000453091 CASTP20810 708 aaKnown RBP9.24□□□□□ -0.93
RIF1-206ENST00000453091 RAB11FIP4Q86YS3 637 aa9.24□□□□□ -0.93
RIF1-206ENST00000453091 SRGAP3O43295 1099 aa9.24□□□□□ -0.93
RIF1-206ENST00000453091 ME1P48163 572 aa9.24□□□□□ -0.93
RIF1-206ENST00000453091 CPLX2Q6PUV4 134 aaKnown RBP9.24□□□□□ -0.93
RIF1-206ENST00000453091 PTPRKQ15262 1439 aa9.24□□□□□ -0.93
RIF1-206ENST00000453091 GPS2Q13227 327 aa9.24□□□□□ -0.93
RIF1-206ENST00000453091 HSP90AB4PQ58FF6 505 aa9.24□□□□□ -0.93
RIF1-206ENST00000453091 C16orf71Q8IYS4 520 aaPredicted RBP9.24□□□□□ -0.93
RIF1-206ENST00000453091 CCDC112Q8NEF3 446 aa9.24□□□□□ -0.93
RIF1-206ENST00000453091 NUDT16Q96DE0 195 aaKnown RBP9.24□□□□□ -0.93
RIF1-206ENST00000453091 ZFP91Q96JP5 570 aaPredicted RBP9.24□□□□□ -0.93
RIF1-206ENST00000453091 SPATA32Q96LK8 384 aa9.24□□□□□ -0.93
RIF1-206ENST00000453091 NCOA1Q15788 1441 aa9.23□□□□□ -0.93
RIF1-206ENST00000453091 KINO60870 393 aaKnown RBP9.23□□□□□ -0.93
RIF1-206ENST00000453091 IBSPP21815 317 aaPredicted RBP9.23□□□□□ -0.93
RIF1-206ENST00000453091 OLFM4Q6UX06 510 aa9.23□□□□□ -0.93
RIF1-206ENST00000453091 TRMT1Q9NXH9 659 aaKnown RBP9.23□□□□□ -0.93
RIF1-206ENST00000453091 SERPINC1P01008 464 aa9.23□□□□□ -0.93
RIF1-206ENST00000453091 PSMA5P28066 241 aa9.23□□□□□ -0.93
RIF1-206ENST00000453091 FAM193AP78312 1265 aa9.23□□□□□ -0.93
RIF1-206ENST00000453091 TBC1D9Q6ZT07 1266 aa9.23□□□□□ -0.93
RIF1-206ENST00000453091 CAGE1Q8TC20 777 aa9.23□□□□□ -0.93
RIF1-206ENST00000453091 ARGLU1Q9NWB6 273 aaPredicted RBP9.23□□□□□ -0.93
RIF1-206ENST00000453091 RTEL1-TNFRSF6BF6WH68 1400 aa9.23□□□□□ -0.93
RIF1-206ENST00000453091 AAMPQ13685 434 aa9.23□□□□□ -0.93
RIF1-206ENST00000453091 TOM1L2Q6ZVM7 507 aa9.23□□□□□ -0.93
RIF1-206ENST00000453091 SRCIN1Q9C0H9 1055 aa9.23□□□□□ -0.93
RIF1-206ENST00000453091 WDR33Q9C0J8 1336 aaKnown RBP9.23□□□□□ -0.93
RIF1-206ENST00000453091 ABCC5O15440 1437 aa9.23□□□□□ -0.93
RIF1-206ENST00000453091 CCDC192P0DO97 292 aa9.23□□□□□ -0.93
RIF1-206ENST00000453091 PIP4K2AP48426 406 aaPredicted RBP9.23□□□□□ -0.93
RIF1-206ENST00000453091 CHMP4AQ9BY43 222 aa9.23□□□□□ -0.93
RIF1-206ENST00000453091 CWC22Q9HCG8 908 aaKnown RBP9.23□□□□□ -0.93
RIF1-206ENST00000453091 SPG7Q9UQ90 795 aa9.23□□□□□ -0.93
RIF1-206ENST00000453091 TROQ12816 1431 aaPredicted RBP9.22□□□□□ -0.93
RIF1-206ENST00000453091 NCKAP5LQ9HCH0 1330 aa9.22□□□□□ -0.93
RIF1-206ENST00000453091 IGSF3O75054 1194 aa9.22□□□□□ -0.93
RIF1-206ENST00000453091 NUP62CLQ9H1M0 184 aa9.22□□□□□ -0.93
RIF1-206ENST00000453091 TFIP11Q9UBB9 837 aaKnown RBP9.22□□□□□ -0.93
RIF1-206ENST00000453091 ERICH3Q5RHP9 1530 aa9.22□□□□□ -0.93
RIF1-206ENST00000453091 PTCD1O75127 700 aaKnown RBP9.22□□□□□ -0.93
RIF1-206ENST00000453091 ZMYND15Q9H091 742 aa9.22□□□□□ -0.93
RIF1-206ENST00000453091 SYNJ2O15056 1496 aa9.22□□□□□ -0.93
RIF1-206ENST00000453091 CABP4P57796 275 aa9.21□□□□□ -0.93
RIF1-206ENST00000453091 SETQ01105 290 aaPredicted RBP9.21□□□□□ -0.93
RIF1-206ENST00000453091 MPRIPQ6WCQ1 1025 aa9.21□□□□□ -0.93
RIF1-206ENST00000453091 CCDC8Q9H0W5 538 aaPredicted RBP9.21□□□□□ -0.93
RIF1-206ENST00000453091 RLBP1P12271 317 aa9.21□□□□□ -0.93
RIF1-206ENST00000453091 PDCL2Q8N4E4 241 aa9.21□□□□□ -0.93
RIF1-206ENST00000453091 MAPKBP1O60336 1514 aa9.21□□□□□ -0.93
RIF1-206ENST00000453091 ERICH2A1L162 156 aa9.21□□□□□ -0.94
RIF1-206ENST00000453091 RRP9O43818 475 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms