RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 MORC2Q9Y6X9 1032 aaPredicted RBP22.65■■□□□ 1.22
PTPA-223ENST00000452489 GADD45BO75293 160 aaPredicted RBP22.64■■□□□ 1.22
PTPA-223ENST00000452489 SYAP1Q96A49 352 aaPredicted RBP22.64■■□□□ 1.22
PTPA-223ENST00000452489 GDPD2Q9HCC8 539 aa22.64■■□□□ 1.22
PTPA-223ENST00000452489 CDC42BPAQ5VT25 1732 aa22.64■■□□□ 1.21
PTPA-223ENST00000452489 GSPT1P15170 499 aaKnown RBP22.64■■□□□ 1.21
PTPA-223ENST00000452489 ZBTB9Q96C00 473 aa22.64■■□□□ 1.21
PTPA-223ENST00000452489 SHANK2Q9UPX8 1470 aa22.64■■□□□ 1.21
PTPA-223ENST00000452489 HCLS1P14317 486 aaPredicted RBP22.63■■□□□ 1.21
PTPA-223ENST00000452489 CCDC27Q2M243 656 aa22.63■■□□□ 1.21
PTPA-223ENST00000452489 C1orf115Q9H7X2 142 aa22.63■■□□□ 1.21
PTPA-223ENST00000452489 FAM184AQ8NB25 1140 aa22.63■■□□□ 1.21
PTPA-223ENST00000452489 KIF18AQ8NI77 898 aa22.63■■□□□ 1.21
PTPA-223ENST00000452489 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.63■■□□□ 1.21
PTPA-223ENST00000452489 USP26Q9BXU7 913 aa22.63■■□□□ 1.21
PTPA-223ENST00000452489 SYNJ2O15056 1496 aa22.61■■□□□ 1.21
PTPA-223ENST00000452489 RGS22Q8NE09 1264 aa22.61■■□□□ 1.21
PTPA-223ENST00000452489 SMARCA5O60264 1052 aaPredicted RBP22.61■■□□□ 1.21
PTPA-223ENST00000452489 ST18O60284 1047 aa22.61■■□□□ 1.21
PTPA-223ENST00000452489 IQGAP1P46940 1657 aa22.6■■□□□ 1.21
PTPA-223ENST00000452489 PPIP5K1Q6PFW1 1433 aa22.6■■□□□ 1.21
PTPA-223ENST00000452489 DNAJC5BQ9UF47 199 aa22.6■■□□□ 1.21
PTPA-223ENST00000452489 PHF14O94880 888 aa22.6■■□□□ 1.21
PTPA-223ENST00000452489 TPRNQ4KMQ1 711 aa22.6■■□□□ 1.21
PTPA-223ENST00000452489 TEX2Q8IWB9 1127 aa22.6■■□□□ 1.21
PTPA-223ENST00000452489 ANKRD36BQ8N2N9 1353 aa22.59■■□□□ 1.21
PTPA-223ENST00000452489 SPC24Q8NBT2 197 aa22.59■■□□□ 1.21
PTPA-223ENST00000452489 CALCOCO1Q9P1Z2 691 aa22.59■■□□□ 1.21
PTPA-223ENST00000452489 RAPGEF6Q8TEU7 1601 aa22.59■■□□□ 1.21
PTPA-223ENST00000452489 AP5Z1O43299 807 aa22.59■■□□□ 1.21
PTPA-223ENST00000452489 KDM4AO75164 1064 aa22.58■■□□□ 1.21
PTPA-223ENST00000452489 HNRNPMP52272 730 aaKnown RBP eCLIP22.58■■□□□ 1.212e-7■■□□□ 14.1
PTPA-223ENST00000452489 KRT222Q8N1A0 295 aa22.58■■□□□ 1.2
PTPA-223ENST00000452489 SECISBP2LQ93073 1101 aaKnown RBP22.58■■□□□ 1.2
PTPA-223ENST00000452489 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.57■■□□□ 1.2
PTPA-223ENST00000452489 GCC1Q96CN9 775 aa22.57■■□□□ 1.2
PTPA-223ENST00000452489 ST7Q9NRC1 585 aa22.57■■□□□ 1.2
PTPA-223ENST00000452489 BRD1O95696 1058 aa22.57■■□□□ 1.2
PTPA-223ENST00000452489 CT47B1P0C2W7 299 aaPredicted RBP22.57■■□□□ 1.2
PTPA-223ENST00000452489 NOS1P29475 1434 aa22.56■■□□□ 1.2
PTPA-223ENST00000452489 SYCP1Q15431 976 aa22.55■■□□□ 1.2
PTPA-223ENST00000452489 C16orf45Q96MC5 204 aaPredicted RBP22.55■■□□□ 1.2
PTPA-223ENST00000452489 SCAF11Q99590 1463 aaKnown RBP22.54■■□□□ 1.2
PTPA-223ENST00000452489 CEP152O94986 1710 aa22.54■■□□□ 1.2
PTPA-223ENST00000452489 MORC1Q86VD1 984 aa22.54■■□□□ 1.2
PTPA-223ENST00000452489 CHRM1P11229 460 aaPredicted RBP22.54■■□□□ 1.2
PTPA-223ENST00000452489 USP48Q86UV5 1035 aa22.54■■□□□ 1.2
PTPA-223ENST00000452489 URB2Q14146 1524 aaKnown RBP22.53■■□□□ 1.2
PTPA-223ENST00000452489 FEZ2Q9UHY8 353 aaPredicted RBP22.53■■□□□ 1.2
PTPA-223ENST00000452489 KDM5AP29375 1690 aaKnown RBP22.52■■□□□ 1.2
PTPA-223ENST00000452489 SIRT2Q8IXJ6 389 aa22.52■■□□□ 1.2
PTPA-223ENST00000452489 SMTNL1A8MU46 457 aa22.52■■□□□ 1.19
PTPA-223ENST00000452489 TMX3Q96JJ7 454 aa22.51■■□□□ 1.19
PTPA-223ENST00000452489 KMT5BQ4FZB7 885 aa22.51■■□□□ 1.19
PTPA-223ENST00000452489 CHMP4CQ96CF2 233 aa22.51■■□□□ 1.19
PTPA-223ENST00000452489 PLEKHM2Q8IWE5 1019 aa22.5■■□□□ 1.19
PTPA-223ENST00000452489 PTGS1P23219 599 aa22.5■■□□□ 1.19
PTPA-223ENST00000452489 MTHFSP49914 203 aa22.5■■□□□ 1.19
PTPA-223ENST00000452489 PLB1Q6P1J6 1458 aa22.49■■□□□ 1.19
PTPA-223ENST00000452489 IPO8O15397 1037 aaKnown RBP22.49■■□□□ 1.19
PTPA-223ENST00000452489 HNRNPH2P55795 449 aaKnown RBP22.49■■□□□ 1.19
PTPA-223ENST00000452489 CCDC183Q5T5S1 534 aa22.49■■□□□ 1.19
PTPA-223ENST00000452489 MADDQ8WXG6 1647 aa22.49■■□□□ 1.19
PTPA-223ENST00000452489 ZBTB7BO15156 539 aaPredicted RBP22.49■■□□□ 1.19
PTPA-223ENST00000452489 U2AF1L5P0DN76 240 aaPredicted RBP22.49■■□□□ 1.19
PTPA-223ENST00000452489 U2AF1Q01081 240 aaKnown RBP eCLIP22.49■■□□□ 1.19
PTPA-223ENST00000452489 DISP1Q96F81 1524 aa22.48■■□□□ 1.19
PTPA-223ENST00000452489 INTS3Q68E01 1043 aaKnown RBP22.48■■□□□ 1.19
PTPA-223ENST00000452489 NOL8Q76FK4 1167 aaKnown RBP22.48■■□□□ 1.19
PTPA-223ENST00000452489 KIAA0556O60303 1618 aa22.47■■□□□ 1.19
PTPA-223ENST00000452489 TTC22Q5TAA0 569 aa22.47■■□□□ 1.19
PTPA-223ENST00000452489 C16orf71Q8IYS4 520 aaPredicted RBP22.47■■□□□ 1.19
PTPA-223ENST00000452489 TNNT1P13805 278 aa22.47■■□□□ 1.19
PTPA-223ENST00000452489 CCDC112Q8NEF3 446 aa22.47■■□□□ 1.19
PTPA-223ENST00000452489 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.47■■□□□ 1.19
PTPA-223ENST00000452489 V9GYY5 206 aaPredicted RBP22.47■■□□□ 1.19
PTPA-223ENST00000452489 CLTCL1P53675 1640 aa22.46■■□□□ 1.19
PTPA-223ENST00000452489 FAM53CQ9NYF3 392 aa22.46■■□□□ 1.19
PTPA-223ENST00000452489 U2SURPO15042 1029 aaKnown RBP22.46■■□□□ 1.19
PTPA-223ENST00000452489 TPM3P06753 285 aa22.46■■□□□ 1.19
PTPA-223ENST00000452489 NEK4P51957 841 aa22.46■■□□□ 1.19
PTPA-223ENST00000452489 LRMPQ12912 555 aa22.46■■□□□ 1.19
PTPA-223ENST00000452489 TSPYL1Q9H0U9 437 aa22.46■■□□□ 1.19
PTPA-223ENST00000452489 RBM6P78332 1123 aaKnown RBP22.45■■□□□ 1.18
PTPA-223ENST00000452489 RAD51AP2Q09MP3 1159 aa22.45■■□□□ 1.18
PTPA-223ENST00000452489 MX1P20591 662 aa22.45■■□□□ 1.18
PTPA-223ENST00000452489 ZNF397Q8NF99 534 aaPredicted RBP22.45■■□□□ 1.18
PTPA-223ENST00000452489 ERVK-7P63135 1459 aa22.44■■□□□ 1.18
PTPA-223ENST00000452489 ABCC11Q96J66 1382 aa22.44■■□□□ 1.18
PTPA-223ENST00000452489 PDS5BQ9NTI5 1447 aa22.44■■□□□ 1.18
PTPA-223ENST00000452489 IFT57Q9NWB7 429 aa22.44■■□□□ 1.18
PTPA-223ENST00000452489 ZNF518AQ6AHZ1 1483 aa22.44■■□□□ 1.18
PTPA-223ENST00000452489 GIMAP6Q6P9H5 292 aa22.43■■□□□ 1.18
PTPA-223ENST00000452489 OTUD7AQ8TE49 926 aaPredicted RBP22.43■■□□□ 1.18
PTPA-223ENST00000452489 TRIM35Q9UPQ4 493 aa22.43■■□□□ 1.18
PTPA-223ENST00000452489 NSD3Q9BZ95 1437 aa22.43■■□□□ 1.18
PTPA-223ENST00000452489 GOLGA6L6A8MZA4 724 aa22.42■■□□□ 1.18
PTPA-223ENST00000452489 CYP2C19P33261 490 aa22.42■■□□□ 1.18
PTPA-223ENST00000452489 MED14O60244 1454 aa22.42■■□□□ 1.18
PTPA-223ENST00000452489 FBXO38Q6PIJ6 1188 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms