RNA–Protein interactions for RNA: ENST00000449858.2

GAPDHP17-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase pseudogene 17, humanhuman

BASIC

Gene GAPDHP17, Length 1,001 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP17-201ENST00000449858 IRF7Q92985 503 aa7.67□□□□□ -1.18
GAPDHP17-201ENST00000449858 CDK15Q96Q40 435 aa7.67□□□□□ -1.18
GAPDHP17-201ENST00000449858 GPSM3Q9Y4H4 160 aa7.67□□□□□ -1.18
GAPDHP17-201ENST00000449858 NDUFB9Q9Y6M9 179 aa7.67□□□□□ -1.18
GAPDHP17-201ENST00000449858 WASF2Q9Y6W5 498 aa7.67□□□□□ -1.18
GAPDHP17-201ENST00000449858 ERBB4Q15303 1308 aa7.65□□□□□ -1.18
GAPDHP17-201ENST00000449858 TRMT44Q8IYL2 757 aaKnown RBP7.65□□□□□ -1.18
GAPDHP17-201ENST00000449858 TLL2Q9Y6L7 1015 aa7.65□□□□□ -1.18
GAPDHP17-201ENST00000449858 H3BM21 787 aa7.64□□□□□ -1.19
GAPDHP17-201ENST00000449858 FLIIQ13045 1269 aa7.64□□□□□ -1.19
GAPDHP17-201ENST00000449858 MCM6Q14566 821 aa7.64□□□□□ -1.19
GAPDHP17-201ENST00000449858 ERFEQ4G0M1 354 aa7.64□□□□□ -1.19
GAPDHP17-201ENST00000449858 ADAM32Q8TC27 787 aa7.64□□□□□ -1.19
GAPDHP17-201ENST00000449858 ZBBXA8MT70 800 aa7.63□□□□□ -1.19
GAPDHP17-201ENST00000449858 CAPN5O15484 640 aaPredicted RBP7.63□□□□□ -1.19
GAPDHP17-201ENST00000449858 OCSTAMPQ9BR26 566 aa7.63□□□□□ -1.19
GAPDHP17-201ENST00000449858 TBC1D2BQ9UPU7 963 aa7.63□□□□□ -1.19
GAPDHP17-201ENST00000449858 MAP4K5Q9Y4K4 846 aa7.63□□□□□ -1.19
GAPDHP17-201ENST00000449858 VASH1Q7L8A9 365 aaPredicted RBP7.62□□□□□ -1.19
GAPDHP17-201ENST00000449858 NPAS3Q8IXF0 933 aa7.62□□□□□ -1.19
GAPDHP17-201ENST00000449858 SLC10A4Q96EP9 437 aa7.62□□□□□ -1.19
GAPDHP17-201ENST00000449858 GPR37L1O60883 481 aa7.61□□□□□ -1.19
GAPDHP17-201ENST00000449858 FBXO45P0C2W1 286 aa7.61□□□□□ -1.19
GAPDHP17-201ENST00000449858 GRM5P41594 1212 aa7.61□□□□□ -1.19
GAPDHP17-201ENST00000449858 DZIP3Q86Y13 1208 aaKnown RBP7.61□□□□□ -1.19
GAPDHP17-201ENST00000449858 GDPD2Q9HCC8 539 aa7.61□□□□□ -1.19
GAPDHP17-201ENST00000449858 CDV3Q9UKY7 258 aaKnown RBP7.61□□□□□ -1.19
GAPDHP17-201ENST00000449858 ADH1CP00326 375 aa7.6□□□□□ -1.19
GAPDHP17-201ENST00000449858 ABL2P42684 1182 aa7.6□□□□□ -1.19
GAPDHP17-201ENST00000449858 NR1H3Q13133 447 aa7.6□□□□□ -1.19
GAPDHP17-201ENST00000449858 NR5A1Q13285 461 aa7.6□□□□□ -1.19
GAPDHP17-201ENST00000449858 NNTQ13423 1086 aa7.6□□□□□ -1.19
GAPDHP17-201ENST00000449858 ZNF330Q9Y3S2 320 aaPredicted RBP7.6□□□□□ -1.19
GAPDHP17-201ENST00000449858 RAD21O60216 631 aa7.59□□□□□ -1.19
GAPDHP17-201ENST00000449858 UBTFP17480 764 aaKnown RBP7.59□□□□□ -1.19
GAPDHP17-201ENST00000449858 ZFP42Q96MM3 310 aa7.59□□□□□ -1.19
GAPDHP17-201ENST00000449858 KLF16Q9BXK1 252 aaPredicted RBP7.59□□□□□ -1.19
GAPDHP17-201ENST00000449858 PCDHB9Q9Y5E1 797 aa7.59□□□□□ -1.19
GAPDHP17-201ENST00000449858 SUZ12Q15022 739 aaKnown RBP7.58□□□□□ -1.2
GAPDHP17-201ENST00000449858 KCTD15Q96SI1 283 aaPredicted RBP7.58□□□□□ -1.2
GAPDHP17-201ENST00000449858 COG6Q9Y2V7 657 aa7.58□□□□□ -1.2
GAPDHP17-201ENST00000449858 FSHRP23945 695 aa7.57□□□□□ -1.2
GAPDHP17-201ENST00000449858 MCCD1P59942 119 aaPredicted RBP7.56□□□□□ -1.2
GAPDHP17-201ENST00000449858 IRF5Q13568 498 aa7.56□□□□□ -1.2
GAPDHP17-201ENST00000449858 NBPF20Q3BBV1 942 aa7.56□□□□□ -1.2
GAPDHP17-201ENST00000449858 WWC1Q8IX03 1113 aa7.56□□□□□ -1.2
GAPDHP17-201ENST00000449858 ZNF592Q92610 1267 aa7.56□□□□□ -1.2
GAPDHP17-201ENST00000449858 SOBPA7XYQ1 873 aa7.55□□□□□ -1.2
GAPDHP17-201ENST00000449858 NR3C2P08235 984 aa7.55□□□□□ -1.2
GAPDHP17-201ENST00000449858 TIMP2P16035 220 aa7.55□□□□□ -1.2
GAPDHP17-201ENST00000449858 WDR4P57081 412 aaKnown RBP7.55□□□□□ -1.2
GAPDHP17-201ENST00000449858 WASHC4Q2M389 1173 aa7.55□□□□□ -1.2
GAPDHP17-201ENST00000449858 CCDC116Q8IYX3 515 aa7.55□□□□□ -1.2
GAPDHP17-201ENST00000449858 RAB15P59190 212 aa7.54□□□□□ -1.2
GAPDHP17-201ENST00000449858 EIF4G2P78344 907 aaKnown RBP eCLIP7.54□□□□□ -1.2
GAPDHP17-201ENST00000449858 POM121Q96HA1 1249 aa7.54□□□□□ -1.2
GAPDHP17-201ENST00000449858 ZIC2O95409 532 aaPredicted RBP7.53□□□□□ -1.2
GAPDHP17-201ENST00000449858 DHX9Q08211 1270 aaKnown RBP7.53□□□□□ -1.2
GAPDHP17-201ENST00000449858 VAC14Q08AM6 782 aa7.53□□□□□ -1.2
GAPDHP17-201ENST00000449858 INTS6LQ5JSJ4 861 aaKnown RBP7.53□□□□□ -1.2
GAPDHP17-201ENST00000449858 EMILIN1Q9Y6C2 1016 aa7.53□□□□□ -1.2
GAPDHP17-201ENST00000449858 GIGYF1O75420 1035 aaPredicted RBP7.52□□□□□ -1.21
GAPDHP17-201ENST00000449858 KCTD17Q8N5Z5 321 aa7.52□□□□□ -1.21
GAPDHP17-201ENST00000449858 PURBQ96QR8 312 aaKnown RBP7.52□□□□□ -1.21
GAPDHP17-201ENST00000449858 PGPEP1Q9NXJ5 209 aa7.52□□□□□ -1.21
GAPDHP17-201ENST00000449858 GTF3C3Q9Y5Q9 886 aa7.52□□□□□ -1.21
GAPDHP17-201ENST00000449858 ESPNB1AK53 854 aa7.51□□□□□ -1.21
GAPDHP17-201ENST00000449858 PPP1R26Q5T8A7 1209 aaPredicted RBP7.51□□□□□ -1.21
GAPDHP17-201ENST00000449858 MRPL14Q6P1L8 145 aaKnown RBP7.51□□□□□ -1.21
GAPDHP17-201ENST00000449858 SEPT12Q8IYM1 358 aa7.51□□□□□ -1.21
GAPDHP17-201ENST00000449858 ITPKCQ96DU7 683 aa7.51□□□□□ -1.21
GAPDHP17-201ENST00000449858 ZFAND3Q9H8U3 227 aa7.51□□□□□ -1.21
GAPDHP17-201ENST00000449858 RNF20Q5VTR2 975 aa7.5□□□□□ -1.21
GAPDHP17-201ENST00000449858 CLUAP1Q96AJ1 413 aa7.5□□□□□ -1.21
GAPDHP17-201ENST00000449858 ERVH48-1M5A8F1 160 aa7.49□□□□□ -1.21
GAPDHP17-201ENST00000449858 VSIG8P0DPA2 414 aa7.49□□□□□ -1.21
GAPDHP17-201ENST00000449858 SEMA3FQ13275 785 aa7.49□□□□□ -1.21
GAPDHP17-201ENST00000449858 SCARF1Q14162 830 aa7.49□□□□□ -1.21
GAPDHP17-201ENST00000449858 CCDC125Q86Z20 511 aa7.49□□□□□ -1.21
GAPDHP17-201ENST00000449858 TRIM52Q96A61 297 aa7.49□□□□□ -1.21
GAPDHP17-201ENST00000449858 CEP126Q9P2H0 1117 aa7.49□□□□□ -1.21
GAPDHP17-201ENST00000449858 SOX11P35716 441 aa7.48□□□□□ -1.21
GAPDHP17-201ENST00000449858 GSK3AP49840 483 aa7.48□□□□□ -1.21
GAPDHP17-201ENST00000449858 TMPRSS4Q9NRS4 437 aa7.48□□□□□ -1.21
GAPDHP17-201ENST00000449858 KCNMA1Q12791 1236 aa7.47□□□□□ -1.21
GAPDHP17-201ENST00000449858 MEIOBQ8N635 442 aa7.47□□□□□ -1.21
GAPDHP17-201ENST00000449858 UPP2O95045 317 aa7.46□□□□□ -1.22
GAPDHP17-201ENST00000449858 SLFNL1Q499Z3 407 aa7.46□□□□□ -1.22
GAPDHP17-201ENST00000449858 A6NJR5 290 aa7.45□□□□□ -1.22
GAPDHP17-201ENST00000449858 CBLBQ13191 982 aa7.45□□□□□ -1.22
GAPDHP17-201ENST00000449858 Q6ZVU0 165 aa7.45□□□□□ -1.22
GAPDHP17-201ENST00000449858 PROSER2Q86WR7 435 aaPredicted RBP7.45□□□□□ -1.22
GAPDHP17-201ENST00000449858 ZNF784Q8NCA9 323 aaPredicted RBP7.45□□□□□ -1.22
GAPDHP17-201ENST00000449858 ESF1Q9H501 851 aaKnown RBP7.45□□□□□ -1.22
GAPDHP17-201ENST00000449858 CYLDQ9NQC7 956 aa7.44□□□□□ -1.22
GAPDHP17-201ENST00000449858 PCDHB11Q9Y5F2 797 aa7.44□□□□□ -1.22
GAPDHP17-201ENST00000449858 POM121CA8CG34 1229 aa7.43□□□□□ -1.22
GAPDHP17-201ENST00000449858 MAN1A2O60476 641 aa7.43□□□□□ -1.22
GAPDHP17-201ENST00000449858 LILRA1O75019 489 aa7.43□□□□□ -1.22
GAPDHP17-201ENST00000449858 C6orf118Q5T5N4 469 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms