RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 SMC2O95347 1197 aa16.66■□□□□ 0.26
RAPGEF3-205ENST00000449771 CEBPZQ03701 1054 aaKnown RBP16.66■□□□□ 0.26
RAPGEF3-205ENST00000449771 HFM1A2PYH4 1435 aa16.66■□□□□ 0.26
RAPGEF3-205ENST00000449771 LRRCC1Q9C099 1032 aa16.66■□□□□ 0.26
RAPGEF3-205ENST00000449771 BCL11BQ9C0K0 894 aaPredicted RBP16.65■□□□□ 0.26
RAPGEF3-205ENST00000449771 STK38Q15208 465 aa16.65■□□□□ 0.26
RAPGEF3-205ENST00000449771 FILIP1LQ4L180 1135 aa16.65■□□□□ 0.26
RAPGEF3-205ENST00000449771 ZSCAN25Q6NSZ9 544 aa16.65■□□□□ 0.26
RAPGEF3-205ENST00000449771 SLC52A1Q9NWF4 448 aa16.65■□□□□ 0.26
RAPGEF3-205ENST00000449771 PDZRN3Q9UPQ7 1066 aa16.65■□□□□ 0.26
RAPGEF3-205ENST00000449771 MRC2Q9UBG0 1479 aa16.65■□□□□ 0.26
RAPGEF3-205ENST00000449771 CCDC66A2RUB6 948 aa16.65■□□□□ 0.26
RAPGEF3-205ENST00000449771 ACBD3Q9H3P7 528 aa16.65■□□□□ 0.26
RAPGEF3-205ENST00000449771 ARGLU1Q9NWB6 273 aaPredicted RBP16.65■□□□□ 0.26
RAPGEF3-205ENST00000449771 STK3Q13188 491 aa16.65■□□□□ 0.26
RAPGEF3-205ENST00000449771 ZSCAN29Q8IWY8 852 aaPredicted RBP16.65■□□□□ 0.26
RAPGEF3-205ENST00000449771 LETM1O95202 739 aaPredicted RBP16.64■□□□□ 0.25
RAPGEF3-205ENST00000449771 BRPF1P55201 1214 aaPredicted RBP16.64■□□□□ 0.25
RAPGEF3-205ENST00000449771 NUP133Q8WUM0 1156 aa16.64■□□□□ 0.25
RAPGEF3-205ENST00000449771 FKBP4Q02790 459 aaKnown RBP eCLIP16.64■□□□□ 0.25
RAPGEF3-205ENST00000449771 CFTRP13569 1480 aa16.64■□□□□ 0.25
RAPGEF3-205ENST00000449771 RAPGEF3O95398 923 aa16.64■□□□□ 0.25
RAPGEF3-205ENST00000449771 ERBINQ96RT1 1412 aa16.64■□□□□ 0.25
RAPGEF3-205ENST00000449771 PDCP20941 246 aa16.64■□□□□ 0.25
RAPGEF3-205ENST00000449771 RRS1Q15050 365 aaKnown RBP16.64■□□□□ 0.25
RAPGEF3-205ENST00000449771 SOGA3Q5TF21 947 aa16.64■□□□□ 0.25
RAPGEF3-205ENST00000449771 RBM10P98175 930 aaKnown RBP16.63■□□□□ 0.25
RAPGEF3-205ENST00000449771 TRIM22Q8IYM9 498 aa16.63■□□□□ 0.25
RAPGEF3-205ENST00000449771 SMARCE1Q969G3 411 aa16.63■□□□□ 0.25
RAPGEF3-205ENST00000449771 ZHX3Q9H4I2 956 aa16.63■□□□□ 0.25
RAPGEF3-205ENST00000449771 CYP46A1Q9Y6A2 500 aa16.63■□□□□ 0.25
RAPGEF3-205ENST00000449771 MCM2P49736 904 aa16.62■□□□□ 0.25
RAPGEF3-205ENST00000449771 FMNL2Q96PY5 1086 aa16.62■□□□□ 0.25
RAPGEF3-205ENST00000449771 AACSQ86V21 672 aa16.62■□□□□ 0.25
RAPGEF3-205ENST00000449771 RNF214Q8ND24 703 aa16.62■□□□□ 0.25
RAPGEF3-205ENST00000449771 TRIM5Q9C035 493 aa16.61■□□□□ 0.25
RAPGEF3-205ENST00000449771 RAI14Q9P0K7 980 aa16.61■□□□□ 0.25
RAPGEF3-205ENST00000449771 IFT140Q96RY7 1462 aa16.61■□□□□ 0.25
RAPGEF3-205ENST00000449771 MYO6Q9UM54 1294 aa16.61■□□□□ 0.25
RAPGEF3-205ENST00000449771 SPINK5Q9NQ38 1064 aaPredicted RBP16.61■□□□□ 0.25
RAPGEF3-205ENST00000449771 ZC3H6P61129 1189 aaKnown RBP16.61■□□□□ 0.25
RAPGEF3-205ENST00000449771 RABEP1Q15276 862 aa16.61■□□□□ 0.25
RAPGEF3-205ENST00000449771 CCDC39Q9UFE4 941 aa16.6■□□□□ 0.25
RAPGEF3-205ENST00000449771 NCAPD3P42695 1498 aa16.6■□□□□ 0.25
RAPGEF3-205ENST00000449771 PIP4K2AP48426 406 aaPredicted RBP16.6■□□□□ 0.25
RAPGEF3-205ENST00000449771 MPHOSPH10O00566 681 aaKnown RBP16.6■□□□□ 0.25
RAPGEF3-205ENST00000449771 IGHMBP2P38935 993 aaKnown RBP16.6■□□□□ 0.25
RAPGEF3-205ENST00000449771 ANKRD1Q15327 319 aa16.6■□□□□ 0.25
RAPGEF3-205ENST00000449771 EHBP1L1Q8N3D4 1523 aa16.6■□□□□ 0.25
RAPGEF3-205ENST00000449771 TDO2P48775 406 aa16.59■□□□□ 0.25
RAPGEF3-205ENST00000449771 KIAA1107Q9UPP5 1409 aa16.59■□□□□ 0.25
RAPGEF3-205ENST00000449771 JMYQ8N9B5 988 aa16.59■□□□□ 0.25
RAPGEF3-205ENST00000449771 PDCL3Q9H2J4 239 aa16.59■□□□□ 0.25
RAPGEF3-205ENST00000449771 FIBPO43427 364 aa16.59■□□□□ 0.25
RAPGEF3-205ENST00000449771 HSP90B2PQ58FF3 399 aa16.59■□□□□ 0.25
RAPGEF3-205ENST00000449771 CAVIN1Q6NZI2 390 aaKnown RBP16.59■□□□□ 0.25
RAPGEF3-205ENST00000449771 BCAR3O75815 825 aa16.58■□□□□ 0.25
RAPGEF3-205ENST00000449771 NASPP49321 788 aaPredicted RBP16.58■□□□□ 0.24
RAPGEF3-205ENST00000449771 TSPY26PQ9H489 355 aa16.58■□□□□ 0.24
RAPGEF3-205ENST00000449771 PRPF40AO75400 957 aaKnown RBP16.58■□□□□ 0.24
RAPGEF3-205ENST00000449771 RPGRIP1LQ68CZ1 1315 aa16.58■□□□□ 0.24
RAPGEF3-205ENST00000449771 CCDC85AQ96PX6 553 aaPredicted RBP16.58■□□□□ 0.24
RAPGEF3-205ENST00000449771 STARD3NLO95772 234 aa16.57■□□□□ 0.24
RAPGEF3-205ENST00000449771 SKIDA1Q1XH10 827 aa16.57■□□□□ 0.24
RAPGEF3-205ENST00000449771 CEP126Q9P2H0 1117 aa16.57■□□□□ 0.24
RAPGEF3-205ENST00000449771 SRGAP3O43295 1099 aa16.57■□□□□ 0.24
RAPGEF3-205ENST00000449771 LRP2BPQ9P2M1 347 aa16.57■□□□□ 0.24
RAPGEF3-205ENST00000449771 ERICH3Q5RHP9 1530 aa16.57■□□□□ 0.24
RAPGEF3-205ENST00000449771 MRE11P49959 708 aa16.57■□□□□ 0.24
RAPGEF3-205ENST00000449771 TANGO6Q9C0B7 1094 aa16.57■□□□□ 0.24
RAPGEF3-205ENST00000449771 NOL7Q9UMY1 257 aaKnown RBP16.57■□□□□ 0.24
RAPGEF3-205ENST00000449771 SNAPC4Q5SXM2 1469 aa16.57■□□□□ 0.24
RAPGEF3-205ENST00000449771 PDE3AQ14432 1141 aa16.56■□□□□ 0.24
RAPGEF3-205ENST00000449771 UBAC1Q9BSL1 405 aa16.56■□□□□ 0.24
RAPGEF3-205ENST00000449771 ATAD2Q6PL18 1390 aa16.56■□□□□ 0.24
RAPGEF3-205ENST00000449771 AEBP1Q8IUX7 1158 aa16.56■□□□□ 0.24
RAPGEF3-205ENST00000449771 STIM1Q13586 685 aa16.56■□□□□ 0.24
RAPGEF3-205ENST00000449771 WDR63Q8IWG1 891 aa16.56■□□□□ 0.24
RAPGEF3-205ENST00000449771 MBD3O95983 291 aa16.56■□□□□ 0.24
RAPGEF3-205ENST00000449771 GNAT3A8MTJ3 354 aa16.55■□□□□ 0.24
RAPGEF3-205ENST00000449771 ZNF76P36508 570 aa16.55■□□□□ 0.24
RAPGEF3-205ENST00000449771 HECW1Q76N89 1606 aa16.55■□□□□ 0.24
RAPGEF3-205ENST00000449771 ZNHIT6Q9NWK9 470 aaKnown RBP16.55■□□□□ 0.24
RAPGEF3-205ENST00000449771 KCNH5Q8NCM2 988 aa16.55■□□□□ 0.24
RAPGEF3-205ENST00000449771 TMOD2Q9NZR1 351 aa16.55■□□□□ 0.24
RAPGEF3-205ENST00000449771 ZMYND15Q9H091 742 aa16.54■□□□□ 0.24
RAPGEF3-205ENST00000449771 NUDT16Q96DE0 195 aaKnown RBP16.54■□□□□ 0.24
RAPGEF3-205ENST00000449771 DACH1Q9UI36 760 aa16.54■□□□□ 0.24
RAPGEF3-205ENST00000449771 NESP48681 1621 aa16.54■□□□□ 0.24
RAPGEF3-205ENST00000449771 SERPINC1P01008 464 aa16.54■□□□□ 0.24
RAPGEF3-205ENST00000449771 MATR3P43243 847 aaKnown RBP eCLIP16.54■□□□□ 0.24
RAPGEF3-205ENST00000449771 ME1P48163 572 aa16.54■□□□□ 0.24
RAPGEF3-205ENST00000449771 ERCC4Q92889 916 aaPredicted RBP16.54■□□□□ 0.24
RAPGEF3-205ENST00000449771 TMOD3Q9NYL9 352 aa16.54■□□□□ 0.24
RAPGEF3-205ENST00000449771 HMGB2P26583 209 aaKnown RBP16.54■□□□□ 0.24
RAPGEF3-205ENST00000449771 CCP110O43303 1012 aa16.53■□□□□ 0.24
RAPGEF3-205ENST00000449771 ZPR1O75312 459 aa16.53■□□□□ 0.24
RAPGEF3-205ENST00000449771 CDKL5O76039 1030 aa16.53■□□□□ 0.24
RAPGEF3-205ENST00000449771 CT47B1P0C2W7 299 aaPredicted RBP16.53■□□□□ 0.24
RAPGEF3-205ENST00000449771 ATF7IPQ6VMQ6 1270 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms