RNA–Protein interactions for RNA: ENST00000443790.1

EDEM1-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-203ENST00000443790 MON2Q7Z3U7 1717 aa28.33■■■□□ 2.13
EDEM1-203ENST00000443790 ARHGEF25Q86VW2 580 aa28.33■■■□□ 2.13
EDEM1-203ENST00000443790 KCNH5Q8NCM2 988 aa28.33■■■□□ 2.13
EDEM1-203ENST00000443790 AXIN2Q9Y2T1 843 aa28.33■■■□□ 2.13
EDEM1-203ENST00000443790 WNK3Q9BYP7 1800 aa28.33■■■□□ 2.13
EDEM1-203ENST00000443790 WDR17Q8IZU2 1322 aa28.33■■■□□ 2.13
EDEM1-203ENST00000443790 KTN1Q86UP2 1357 aaKnown RBP28.33■■■□□ 2.13
EDEM1-203ENST00000443790 C11orf95C9JLR9 678 aaPredicted RBP28.32■■■□□ 2.12
EDEM1-203ENST00000443790 NFAT5O94916 1531 aa28.32■■■□□ 2.12
EDEM1-203ENST00000443790 SOX12O15370 315 aa28.29■■■□□ 2.12
EDEM1-203ENST00000443790 DDB1Q16531 1140 aa28.29■■■□□ 2.12
EDEM1-203ENST00000443790 CARD11Q9BXL7 1154 aa28.29■■■□□ 2.12
EDEM1-203ENST00000443790 RGPD5Q99666 1765 aa28.28■■■□□ 2.12
EDEM1-203ENST00000443790 ABCC6O95255 1503 aa28.27■■■□□ 2.12
EDEM1-203ENST00000443790 CD163L1Q9NR16 1453 aa28.26■■■□□ 2.11
EDEM1-203ENST00000443790 USP54Q70EL1 1684 aa28.26■■■□□ 2.11
EDEM1-203ENST00000443790 SBF2Q86WG5 1849 aa28.25■■■□□ 2.11
EDEM1-203ENST00000443790 TONSLQ96HA7 1378 aa28.24■■■□□ 2.11
EDEM1-203ENST00000443790 RGPD3A6NKT7 1758 aaPredicted RBP28.24■■■□□ 2.11
EDEM1-203ENST00000443790 RGPD4Q7Z3J3 1758 aa28.24■■■□□ 2.11
EDEM1-203ENST00000443790 CDCA7Q9BWT1 371 aaPredicted RBP28.24■■■□□ 2.11
EDEM1-203ENST00000443790 CARD10Q9BWT7 1032 aa28.23■■■□□ 2.11
EDEM1-203ENST00000443790 USP31Q70CQ4 1352 aa28.23■■■□□ 2.11
EDEM1-203ENST00000443790 CSB-PGBD3P0DP91 1061 aa28.22■■■□□ 2.11
EDEM1-203ENST00000443790 NBPF14Q5TI25 921 aa28.22■■■□□ 2.11
EDEM1-203ENST00000443790 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.21■■■□□ 2.11
EDEM1-203ENST00000443790 BCL9O00512 1426 aa28.19■■■□□ 2.1
EDEM1-203ENST00000443790 MARCH10Q8NA82 808 aaPredicted RBP28.19■■■□□ 2.1
EDEM1-203ENST00000443790 TMC1Q8TDI8 760 aa28.18■■■□□ 2.1
EDEM1-203ENST00000443790 CCDC7Q96M83 1385 aa28.18■■■□□ 2.1
EDEM1-203ENST00000443790 PLSCR1O15162 318 aa28.17■■■□□ 2.1
EDEM1-203ENST00000443790 NME9Q86XW9 330 aa28.17■■■□□ 2.1
EDEM1-203ENST00000443790 HDGFL2Q7Z4V5 671 aaPredicted RBP28.16■■■□□ 2.1
EDEM1-203ENST00000443790 BCL11BQ9C0K0 894 aaPredicted RBP28.16■■■□□ 2.1
EDEM1-203ENST00000443790 EDC4Q6P2E9 1401 aaKnown RBP28.16■■■□□ 2.1
EDEM1-203ENST00000443790 SLC12A5Q9H2X9 1139 aa28.15■■■□□ 2.1
EDEM1-203ENST00000443790 PTF1AQ7RTS3 328 aa28.14■■■□□ 2.1
EDEM1-203ENST00000443790 LTN1O94822 1766 aa28.14■■■□□ 2.09
EDEM1-203ENST00000443790 A0A1W2PP64 1363 aa28.13■■■□□ 2.09
EDEM1-203ENST00000443790 TNS2Q63HR2 1409 aa28.13■■■□□ 2.09
EDEM1-203ENST00000443790 ERBB3P21860 1342 aa28.13■■■□□ 2.09
EDEM1-203ENST00000443790 PUS7Q96PZ0 661 aaKnown RBP28.12■■■□□ 2.09
EDEM1-203ENST00000443790 EXOC5O00471 708 aa28.11■■■□□ 2.09
EDEM1-203ENST00000443790 TERF2IPQ9NYB0 399 aa28.11■■■□□ 2.09
EDEM1-203ENST00000443790 ANO8Q9HCE9 1232 aaPredicted RBP28.07■■■□□ 2.08
EDEM1-203ENST00000443790 TESK2Q96S53 571 aa28.06■■■□□ 2.08
EDEM1-203ENST00000443790 NLRP2Q9NX02 1062 aa28.06■■■□□ 2.08
EDEM1-203ENST00000443790 NINLQ9Y2I6 1382 aa28.06■■■□□ 2.08
EDEM1-203ENST00000443790 SPON1Q9HCB6 807 aa28.05■■■□□ 2.08
EDEM1-203ENST00000443790 PROM2Q8N271 834 aa28.04■■■□□ 2.08
EDEM1-203ENST00000443790 ANKRD24Q8TF21 1146 aa28.04■■■□□ 2.08
EDEM1-203ENST00000443790 NHSQ6T4R5 1651 aa28.03■■■□□ 2.08
EDEM1-203ENST00000443790 ST20-MTHFSA0A0A6YYL1 179 aa28.03■■■□□ 2.08
EDEM1-203ENST00000443790 KCNQ2O43526 872 aa28.03■■■□□ 2.08
EDEM1-203ENST00000443790 CASZ1Q86V15 1759 aa28.03■■■□□ 2.08
EDEM1-203ENST00000443790 IL2RBP14784 551 aa28.01■■■□□ 2.07
EDEM1-203ENST00000443790 PCGF6Q9BYE7 350 aa28■■■□□ 2.07
EDEM1-203ENST00000443790 TXNRD1Q16881 649 aa27.99■■■□□ 2.07
EDEM1-203ENST00000443790 SLC24A1O60721 1099 aa27.98■■■□□ 2.07
EDEM1-203ENST00000443790 PPP1R1BQ9UD71 204 aaPredicted RBP27.98■■■□□ 2.07
EDEM1-203ENST00000443790 FAM208AQ9UK61 1670 aaKnown RBP27.97■■■□□ 2.07
EDEM1-203ENST00000443790 IP6K1Q92551 441 aa27.96■■■□□ 2.07
EDEM1-203ENST00000443790 ACSBG1Q96GR2 724 aa27.95■■■□□ 2.06
EDEM1-203ENST00000443790 PDGFDQ9GZP0 370 aaPredicted RBP27.94■■■□□ 2.06
EDEM1-203ENST00000443790 ANKRD36BQ8N2N9 1353 aa27.94■■■□□ 2.06
EDEM1-203ENST00000443790 COG3Q96JB2 828 aa27.93■■■□□ 2.06
EDEM1-203ENST00000443790 STK32BQ9NY57 414 aa27.93■■■□□ 2.06
EDEM1-203ENST00000443790 BTAF1O14981 1849 aa27.91■■■□□ 2.06
EDEM1-203ENST00000443790 SLC15A2Q16348 729 aa27.91■■■□□ 2.06
EDEM1-203ENST00000443790 MAP3K19Q56UN5 1328 aa27.91■■■□□ 2.06
EDEM1-203ENST00000443790 LTV1Q96GA3 475 aaPredicted RBP27.9■■■□□ 2.06
EDEM1-203ENST00000443790 USP47Q96K76 1375 aa27.89■■■□□ 2.06
EDEM1-203ENST00000443790 PAPPAQ13219 1627 aa27.89■■■□□ 2.05
EDEM1-203ENST00000443790 ZBTB7AO95365 584 aa27.88■■■□□ 2.05
EDEM1-203ENST00000443790 HOXC9P31274 260 aa27.87■■■□□ 2.05
EDEM1-203ENST00000443790 TMF1P82094 1093 aa27.86■■■□□ 2.05
EDEM1-203ENST00000443790 MYOM1P52179 1685 aa27.86■■■□□ 2.05
EDEM1-203ENST00000443790 FBLN1P23142 703 aa27.85■■■□□ 2.05
EDEM1-203ENST00000443790 AMPHP49418 695 aa27.85■■■□□ 2.05
EDEM1-203ENST00000443790 RTL1A6NKG5 1358 aa27.85■■■□□ 2.05
EDEM1-203ENST00000443790 PTGER2P43116 358 aa27.84■■■□□ 2.05
EDEM1-203ENST00000443790 RGPD2P0DJD1 1756 aa27.82■■■□□ 2.04
EDEM1-203ENST00000443790 DDX54Q8TDD1 881 aaKnown RBP27.82■■■□□ 2.04
EDEM1-203ENST00000443790 ATF5Q9Y2D1 282 aaPredicted RBP27.81■■■□□ 2.04
EDEM1-203ENST00000443790 FYB1O15117 783 aa27.8■■■□□ 2.04
EDEM1-203ENST00000443790 KAT6BQ8WYB5 2073 aa27.79■■■□□ 2.04
EDEM1-203ENST00000443790 SHANK3Q9BYB0 1731 aa27.79■■■□□ 2.04
EDEM1-203ENST00000443790 MEGF6O75095 1541 aa27.79■■■□□ 2.04
EDEM1-203ENST00000443790 MTFR1LQ9H019 292 aa27.79■■■□□ 2.04
EDEM1-203ENST00000443790 GGNBP2Q9H3C7 697 aa27.79■■■□□ 2.04
EDEM1-203ENST00000443790 DCAF8L1A6NGE4 600 aa27.78■■■□□ 2.04
EDEM1-203ENST00000443790 RRS1Q15050 365 aaKnown RBP27.78■■■□□ 2.04
EDEM1-203ENST00000443790 LRRC4BQ9NT99 713 aa27.78■■■□□ 2.04
EDEM1-203ENST00000443790 DOT1LQ8TEK3 1739 aa27.78■■■□□ 2.04
EDEM1-203ENST00000443790 KIF20BQ96Q89 1820 aa27.77■■■□□ 2.04
EDEM1-203ENST00000443790 YY1P25490 414 aa27.77■■■□□ 2.04
EDEM1-203ENST00000443790 ZNF827Q17R98 1081 aa27.76■■■□□ 2.03
EDEM1-203ENST00000443790 CDCA8Q53HL2 280 aa27.76■■■□□ 2.03
EDEM1-203ENST00000443790 SGIP1Q9BQI5 828 aa27.75■■■□□ 2.03
EDEM1-203ENST00000443790 SMG6Q86US8 1419 aaKnown RBP27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms