RNA–Protein interactions for RNA: ENST00000442691.6

NR1I3-211, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-211ENST00000442691 RNF25Q96BH1 459 aaPredicted RBP12.1□□□□□ -0.47
NR1I3-211ENST00000442691 NUDCQ9Y266 331 aa12.1□□□□□ -0.47
NR1I3-211ENST00000442691 SBNO1A3KN83 1393 aa12.09□□□□□ -0.47
NR1I3-211ENST00000442691 ESCO1Q5FWF5 840 aa12.09□□□□□ -0.47
NR1I3-211ENST00000442691 PAXIP1Q6ZW49 1069 aaPredicted RBP12.09□□□□□ -0.47
NR1I3-211ENST00000442691 PMFBP1Q8TBY8 1022 aa12.09□□□□□ -0.47
NR1I3-211ENST00000442691 ZNF335Q9H4Z2 1342 aaPredicted RBP12.09□□□□□ -0.47
NR1I3-211ENST00000442691 RTL1A6NKG5 1358 aa12.08□□□□□ -0.48
NR1I3-211ENST00000442691 NUTM2FA1L443 756 aa12.08□□□□□ -0.48
NR1I3-211ENST00000442691 RIOK3O14730 519 aaKnown RBP12.08□□□□□ -0.48
NR1I3-211ENST00000442691 CHRM1P11229 460 aaPredicted RBP12.08□□□□□ -0.48
NR1I3-211ENST00000442691 POLKQ9UBT6 870 aa12.08□□□□□ -0.48
NR1I3-211ENST00000442691 TAOK2Q9UL54 1235 aa12.08□□□□□ -0.48
NR1I3-211ENST00000442691 TRPM3Q9HCF6 1732 aaPredicted RBP12.08□□□□□ -0.48
NR1I3-211ENST00000442691 NPHP3Q7Z494 1330 aa12.08□□□□□ -0.48
NR1I3-211ENST00000442691 PHRF1Q9P1Y6 1649 aaKnown RBP12.08□□□□□ -0.48
NR1I3-211ENST00000442691 PDE3BQ13370 1112 aa12.07□□□□□ -0.48
NR1I3-211ENST00000442691 CFAP44Q96MT7 982 aa12.07□□□□□ -0.48
NR1I3-211ENST00000442691 PNNQ9H307 717 aaKnown RBP12.07□□□□□ -0.48
NR1I3-211ENST00000442691 FARP1Q9Y4F1 1045 aaPredicted RBP12.07□□□□□ -0.48
NR1I3-211ENST00000442691 SLIT3O75094 1523 aa12.06□□□□□ -0.48
NR1I3-211ENST00000442691 PRKAR2AP13861 404 aaKnown RBP12.06□□□□□ -0.48
NR1I3-211ENST00000442691 PSME1Q06323 249 aa12.06□□□□□ -0.48
NR1I3-211ENST00000442691 ADAMTS8Q9UP79 889 aa12.06□□□□□ -0.48
NR1I3-211ENST00000442691 MED1Q15648 1581 aaPredicted RBP12.05□□□□□ -0.48
NR1I3-211ENST00000442691 LTBP4Q8N2S1 1624 aa12.05□□□□□ -0.48
NR1I3-211ENST00000442691 HS6ST3Q8IZP7 471 aa12.05□□□□□ -0.48
NR1I3-211ENST00000442691 KCNH5Q8NCM2 988 aa12.05□□□□□ -0.48
NR1I3-211ENST00000442691 MARF1Q9Y4F3 1742 aaKnown RBP12.05□□□□□ -0.48
NR1I3-211ENST00000442691 ABCC6O95255 1503 aa12.05□□□□□ -0.48
NR1I3-211ENST00000442691 USP19O94966 1318 aa12.05□□□□□ -0.48
NR1I3-211ENST00000442691 FLT4P35916 1363 aa12.05□□□□□ -0.48
NR1I3-211ENST00000442691 ALS2Q96Q42 1657 aa12.04□□□□□ -0.48
NR1I3-211ENST00000442691 DIAPH1O60610 1272 aaKnown RBP12.04□□□□□ -0.48
NR1I3-211ENST00000442691 TNNT2P45379 298 aaPredicted RBP12.04□□□□□ -0.48
NR1I3-211ENST00000442691 SPRYD3Q8NCJ5 442 aa12.04□□□□□ -0.48
NR1I3-211ENST00000442691 ARHGEF10O15013 1369 aa12.04□□□□□ -0.48
NR1I3-211ENST00000442691 IQSEC2Q5JU85 1478 aa12.03□□□□□ -0.48
NR1I3-211ENST00000442691 PXDNQ92626 1479 aa12.03□□□□□ -0.48
NR1I3-211ENST00000442691 NFAT5O94916 1531 aa12.03□□□□□ -0.48
NR1I3-211ENST00000442691 NLRP6P59044 892 aa12.03□□□□□ -0.48
NR1I3-211ENST00000442691 RBM33Q96EV2 1170 aaKnown RBP12.03□□□□□ -0.48
NR1I3-211ENST00000442691 ORAI2Q96SN7 254 aa12.03□□□□□ -0.48
NR1I3-211ENST00000442691 PYGBP11216 843 aa12.02□□□□□ -0.49
NR1I3-211ENST00000442691 FXR2P51116 673 aaKnown RBP eCLIP12.02□□□□□ -0.49
NR1I3-211ENST00000442691 ABTB2Q8N961 1025 aa12.02□□□□□ -0.49
NR1I3-211ENST00000442691 RUNDC1Q96C34 613 aa12.02□□□□□ -0.49
NR1I3-211ENST00000442691 MAP2P11137 1827 aaKnown RBP12.02□□□□□ -0.49
NR1I3-211ENST00000442691 TNS3Q68CZ2 1445 aa12.02□□□□□ -0.49
NR1I3-211ENST00000442691 FCHSD2O94868 740 aa12.01□□□□□ -0.49
NR1I3-211ENST00000442691 CCDC27Q2M243 656 aa12.01□□□□□ -0.49
NR1I3-211ENST00000442691 KRT28Q7Z3Y7 464 aa12.01□□□□□ -0.49
NR1I3-211ENST00000442691 TSPYL2Q9H2G4 693 aaPredicted RBP12.01□□□□□ -0.49
NR1I3-211ENST00000442691 SLAIN2Q9P270 581 aa12.01□□□□□ -0.49
NR1I3-211ENST00000442691 FOXO3O43524 673 aa12□□□□□ -0.49
NR1I3-211ENST00000442691 CHRDL2Q6WN34 429 aa12□□□□□ -0.49
NR1I3-211ENST00000442691 BRINP3Q76B58 766 aa12□□□□□ -0.49
NR1I3-211ENST00000442691 ZRANB1Q9UGI0 708 aa12□□□□□ -0.49
NR1I3-211ENST00000442691 EMILIN1Q9Y6C2 1016 aa12□□□□□ -0.49
NR1I3-211ENST00000442691 ZNF521Q96K83 1311 aa12□□□□□ -0.49
NR1I3-211ENST00000442691 NHSL1Q5SYE7 1610 aa12□□□□□ -0.49
NR1I3-211ENST00000442691 PAK3O75914 559 aaPredicted RBP11.99□□□□□ -0.49
NR1I3-211ENST00000442691 IL13P35225 146 aa11.99□□□□□ -0.49
NR1I3-211ENST00000442691 SOS2Q07890 1332 aaPredicted RBP11.99□□□□□ -0.49
NR1I3-211ENST00000442691 MAP3K19Q56UN5 1328 aa11.99□□□□□ -0.49
NR1I3-211ENST00000442691 PLEKHG2Q9H7P9 1386 aa11.99□□□□□ -0.49
NR1I3-211ENST00000442691 RGPD1P0DJD0 1748 aa11.99□□□□□ -0.49
NR1I3-211ENST00000442691 PEAK1Q9H792 1746 aa11.99□□□□□ -0.49
NR1I3-211ENST00000442691 SPATA31A3Q5VYP0 1347 aa11.98□□□□□ -0.49
NR1I3-211ENST00000442691 U2AF1L5P0DN76 240 aaPredicted RBP11.98□□□□□ -0.49
NR1I3-211ENST00000442691 U2AF1Q01081 240 aaKnown RBP eCLIP11.98□□□□□ -0.49
NR1I3-211ENST00000442691 VSIG10Q8N0Z9 540 aa11.98□□□□□ -0.49
NR1I3-211ENST00000442691 AHDC1Q5TGY3 1603 aaPredicted RBP11.97□□□□□ -0.49
NR1I3-211ENST00000442691 NEFMP07197 916 aa11.97□□□□□ -0.49
NR1I3-211ENST00000442691 PLEKHF1Q96S99 279 aa11.97□□□□□ -0.49
NR1I3-211ENST00000442691 KDRP35968 1356 aa11.96□□□□□ -0.49
NR1I3-211ENST00000442691 RRS1Q15050 365 aaKnown RBP11.96□□□□□ -0.49
NR1I3-211ENST00000442691 CPDO75976 1380 aa11.95□□□□□ -0.5
NR1I3-211ENST00000442691 CRYBG1Q9Y4K1 1723 aa11.95□□□□□ -0.5
NR1I3-211ENST00000442691 MAPK8IP3Q9UPT6 1336 aa11.95□□□□□ -0.5
NR1I3-211ENST00000442691 STK25O00506 426 aa11.95□□□□□ -0.5
NR1I3-211ENST00000442691 U2SURPO15042 1029 aaKnown RBP11.95□□□□□ -0.5
NR1I3-211ENST00000442691 GCP02774 474 aa11.95□□□□□ -0.5
NR1I3-211ENST00000442691 AMPHP49418 695 aa11.95□□□□□ -0.5
NR1I3-211ENST00000442691 IP6K1Q92551 441 aa11.95□□□□□ -0.5
NR1I3-211ENST00000442691 RSPH6AQ9H0K4 717 aa11.95□□□□□ -0.5
NR1I3-211ENST00000442691 NCAPD2Q15021 1401 aa11.94□□□□□ -0.5
NR1I3-211ENST00000442691 IGSF1Q8N6C5 1336 aa11.94□□□□□ -0.5
NR1I3-211ENST00000442691 PPM1GO15355 546 aaPredicted RBP11.94□□□□□ -0.5
NR1I3-211ENST00000442691 HOXC9P31274 260 aa11.94□□□□□ -0.5
NR1I3-211ENST00000442691 EIF4A2Q14240 407 aaKnown RBP11.94□□□□□ -0.5
NR1I3-211ENST00000442691 ARHGEF25Q86VW2 580 aa11.94□□□□□ -0.5
NR1I3-211ENST00000442691 WDR63Q8IWG1 891 aa11.94□□□□□ -0.5
NR1I3-211ENST00000442691 TCP11L2Q8N4U5 519 aa11.94□□□□□ -0.5
NR1I3-211ENST00000442691 IL16Q14005 1332 aa11.93□□□□□ -0.5
NR1I3-211ENST00000442691 LTN1O94822 1766 aa11.93□□□□□ -0.5
NR1I3-211ENST00000442691 APAF1O14727 1248 aa11.93□□□□□ -0.5
NR1I3-211ENST00000442691 GOLGA2Q08379 1002 aa11.93□□□□□ -0.5
NR1I3-211ENST00000442691 PIP4P2Q8N4L2 257 aa11.93□□□□□ -0.5
NR1I3-211ENST00000442691 SGIP1Q9BQI5 828 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms