RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 OVOS2Q6IE36 1432 aa12□□□□□ -0.49
TOP3B-209ENST00000442653 PTF1AQ7RTS3 328 aa11.99□□□□□ -0.49
TOP3B-209ENST00000442653 ROCK2O75116 1388 aaKnown RBP11.99□□□□□ -0.49
TOP3B-209ENST00000442653 WNK3Q9BYP7 1800 aa11.98□□□□□ -0.49
TOP3B-209ENST00000442653 AKAP12Q02952 1782 aa11.98□□□□□ -0.49
TOP3B-209ENST00000442653 TTC21BQ7Z4L5 1316 aa11.98□□□□□ -0.49
TOP3B-209ENST00000442653 WDR17Q8IZU2 1322 aa11.98□□□□□ -0.49
TOP3B-209ENST00000442653 TOM1L2Q6ZVM7 507 aa11.98□□□□□ -0.49
TOP3B-209ENST00000442653 ARHGEF25Q86VW2 580 aa11.98□□□□□ -0.49
TOP3B-209ENST00000442653 SBF2Q86WG5 1849 aa11.97□□□□□ -0.49
TOP3B-209ENST00000442653 NFAT5O94916 1531 aa11.97□□□□□ -0.49
TOP3B-209ENST00000442653 SOX12O15370 315 aa11.97□□□□□ -0.49
TOP3B-209ENST00000442653 NEUROD1Q13562 356 aa11.97□□□□□ -0.49
TOP3B-209ENST00000442653 DDB1Q16531 1140 aa11.97□□□□□ -0.49
TOP3B-209ENST00000442653 NBPF14Q5TI25 921 aa11.96□□□□□ -0.49
TOP3B-209ENST00000442653 MARCH10Q8NA82 808 aaPredicted RBP11.96□□□□□ -0.49
TOP3B-209ENST00000442653 RGPD3A6NKT7 1758 aaPredicted RBP11.96□□□□□ -0.49
TOP3B-209ENST00000442653 RGPD4Q7Z3J3 1758 aa11.96□□□□□ -0.49
TOP3B-209ENST00000442653 RGPD5Q99666 1765 aa11.96□□□□□ -0.49
TOP3B-209ENST00000442653 C11orf95C9JLR9 678 aaPredicted RBP11.95□□□□□ -0.5
TOP3B-209ENST00000442653 ZNF692Q9BU19 519 aaPredicted RBP11.95□□□□□ -0.5
TOP3B-209ENST00000442653 ANO8Q9HCE9 1232 aaPredicted RBP11.95□□□□□ -0.5
TOP3B-209ENST00000442653 UTRNP46939 3433 aa11.95□□□□□ -0.5
TOP3B-209ENST00000442653 MON2Q7Z3U7 1717 aa11.94□□□□□ -0.5
TOP3B-209ENST00000442653 KTN1Q86UP2 1357 aaKnown RBP11.94□□□□□ -0.5
TOP3B-209ENST00000442653 TTC21AQ8NDW8 1320 aa11.94□□□□□ -0.5
TOP3B-209ENST00000442653 PLSCR1O15162 318 aa11.94□□□□□ -0.5
TOP3B-209ENST00000442653 KCNH5Q8NCM2 988 aa11.94□□□□□ -0.5
TOP3B-209ENST00000442653 CARD10Q9BWT7 1032 aa11.94□□□□□ -0.5
TOP3B-209ENST00000442653 BCL11BQ9C0K0 894 aaPredicted RBP11.94□□□□□ -0.5
TOP3B-209ENST00000442653 RNF216Q9NWF9 866 aaPredicted RBP11.94□□□□□ -0.5
TOP3B-209ENST00000442653 BCL9O00512 1426 aa11.94□□□□□ -0.5
TOP3B-209ENST00000442653 CSB-PGBD3P0DP91 1061 aa11.93□□□□□ -0.5
TOP3B-209ENST00000442653 PROM2Q8N271 834 aa11.93□□□□□ -0.5
TOP3B-209ENST00000442653 CDCA7Q9BWT1 371 aaPredicted RBP11.93□□□□□ -0.5
TOP3B-209ENST00000442653 PDGFDQ9GZP0 370 aaPredicted RBP11.93□□□□□ -0.5
TOP3B-209ENST00000442653 CD163L1Q9NR16 1453 aa11.93□□□□□ -0.5
TOP3B-209ENST00000442653 SBNO2Q9Y2G9 1366 aa11.92□□□□□ -0.5
TOP3B-209ENST00000442653 HOXD11P31277 338 aaPredicted RBP11.92□□□□□ -0.5
TOP3B-209ENST00000442653 SPON1Q9HCB6 807 aa11.92□□□□□ -0.5
TOP3B-209ENST00000442653 CASZ1Q86V15 1759 aa11.92□□□□□ -0.5
TOP3B-209ENST00000442653 ABCC6O95255 1503 aa11.91□□□□□ -0.5
TOP3B-209ENST00000442653 KCNQ2O43526 872 aa11.91□□□□□ -0.5
TOP3B-209ENST00000442653 NME9Q86XW9 330 aa11.91□□□□□ -0.5
TOP3B-209ENST00000442653 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.91□□□□□ -0.5
TOP3B-209ENST00000442653 USP54Q70EL1 1684 aa11.91□□□□□ -0.5
TOP3B-209ENST00000442653 TNS2Q63HR2 1409 aa11.9□□□□□ -0.5
TOP3B-209ENST00000442653 USP31Q70CQ4 1352 aa11.9□□□□□ -0.5
TOP3B-209ENST00000442653 CCDC7Q96M83 1385 aa11.9□□□□□ -0.5
TOP3B-209ENST00000442653 PPP1R1BQ9UD71 204 aaPredicted RBP11.89□□□□□ -0.51
TOP3B-209ENST00000442653 ERBB3P21860 1342 aa11.88□□□□□ -0.51
TOP3B-209ENST00000442653 LTN1O94822 1766 aa11.88□□□□□ -0.51
TOP3B-209ENST00000442653 EXOC5O00471 708 aa11.88□□□□□ -0.51
TOP3B-209ENST00000442653 TXNRD1Q16881 649 aa11.88□□□□□ -0.51
TOP3B-209ENST00000442653 CARD11Q9BXL7 1154 aa11.88□□□□□ -0.51
TOP3B-209ENST00000442653 SLC12A5Q9H2X9 1139 aa11.88□□□□□ -0.51
TOP3B-209ENST00000442653 NINLQ9Y2I6 1382 aa11.88□□□□□ -0.51
TOP3B-209ENST00000442653 GOLGB1Q14789 3259 aaKnown RBP11.87□□□□□ -0.51
TOP3B-209ENST00000442653 ZBTB7AO95365 584 aa11.87□□□□□ -0.51
TOP3B-209ENST00000442653 TMC1Q8TDI8 760 aa11.87□□□□□ -0.51
TOP3B-209ENST00000442653 NLRP2Q9NX02 1062 aa11.87□□□□□ -0.51
TOP3B-209ENST00000442653 NHSQ6T4R5 1651 aa11.87□□□□□ -0.51
TOP3B-209ENST00000442653 EDC4Q6P2E9 1401 aaKnown RBP11.86□□□□□ -0.51
TOP3B-209ENST00000442653 PTGER2P43116 358 aa11.86□□□□□ -0.51
TOP3B-209ENST00000442653 A0A1W2PP64 1363 aa11.86□□□□□ -0.51
TOP3B-209ENST00000442653 MYOM1P52179 1685 aa11.86□□□□□ -0.51
TOP3B-209ENST00000442653 YY1P25490 414 aa11.85□□□□□ -0.51
TOP3B-209ENST00000442653 ACSBG1Q96GR2 724 aa11.85□□□□□ -0.51
TOP3B-209ENST00000442653 IL2RBP14784 551 aa11.84□□□□□ -0.51
TOP3B-209ENST00000442653 SLC15A2Q16348 729 aa11.84□□□□□ -0.51
TOP3B-209ENST00000442653 HDGFL2Q7Z4V5 671 aaPredicted RBP11.84□□□□□ -0.51
TOP3B-209ENST00000442653 ANKRD24Q8TF21 1146 aa11.84□□□□□ -0.51
TOP3B-209ENST00000442653 STK32BQ9NY57 414 aa11.84□□□□□ -0.51
TOP3B-209ENST00000442653 ATF5Q9Y2D1 282 aaPredicted RBP11.84□□□□□ -0.51
TOP3B-209ENST00000442653 PAPPAQ13219 1627 aa11.83□□□□□ -0.52
TOP3B-209ENST00000442653 TERF2IPQ9NYB0 399 aa11.83□□□□□ -0.52
TOP3B-209ENST00000442653 BTAF1O14981 1849 aa11.83□□□□□ -0.52
TOP3B-209ENST00000442653 TONSLQ96HA7 1378 aa11.82□□□□□ -0.52
TOP3B-209ENST00000442653 TESK2Q96S53 571 aa11.82□□□□□ -0.52
TOP3B-209ENST00000442653 SGIP1Q9BQI5 828 aa11.81□□□□□ -0.52
TOP3B-209ENST00000442653 ZNF827Q17R98 1081 aa11.8□□□□□ -0.52
TOP3B-209ENST00000442653 IP6K1Q92551 441 aa11.8□□□□□ -0.52
TOP3B-209ENST00000442653 LTV1Q96GA3 475 aaPredicted RBP11.8□□□□□ -0.52
TOP3B-209ENST00000442653 PUS7Q96PZ0 661 aaKnown RBP11.8□□□□□ -0.52
TOP3B-209ENST00000442653 MTFR1LQ9H019 292 aa11.8□□□□□ -0.52
TOP3B-209ENST00000442653 LRRC4BQ9NT99 713 aa11.8□□□□□ -0.52
TOP3B-209ENST00000442653 ST20-MTHFSA0A0A6YYL1 179 aa11.79□□□□□ -0.52
TOP3B-209ENST00000442653 FBLN1P23142 703 aa11.79□□□□□ -0.52
TOP3B-209ENST00000442653 FHDC1Q9C0D6 1143 aaPredicted RBP11.79□□□□□ -0.52
TOP3B-209ENST00000442653 MAP3K19Q56UN5 1328 aa11.79□□□□□ -0.52
TOP3B-209ENST00000442653 KAT6BQ8WYB5 2073 aa11.79□□□□□ -0.52
TOP3B-209ENST00000442653 FAM208AQ9UK61 1670 aaKnown RBP11.78□□□□□ -0.52
TOP3B-209ENST00000442653 DCAF8L1A6NGE4 600 aa11.78□□□□□ -0.52
TOP3B-209ENST00000442653 DDX54Q8TDD1 881 aaKnown RBP11.78□□□□□ -0.52
TOP3B-209ENST00000442653 SYT17Q9BSW7 474 aa11.78□□□□□ -0.52
TOP3B-209ENST00000442653 HOXC9P31274 260 aa11.77□□□□□ -0.53
TOP3B-209ENST00000442653 RGPD2P0DJD1 1756 aa11.77□□□□□ -0.53
TOP3B-209ENST00000442653 MEGF6O75095 1541 aa11.76□□□□□ -0.53
TOP3B-209ENST00000442653 COG3Q96JB2 828 aa11.76□□□□□ -0.53
TOP3B-209ENST00000442653 SHANK3Q9BYB0 1731 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms