RNA–Protein interactions for RNA: ENST00000440538.6

PUM1-207, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-207ENST00000440538 TTC21AQ8NDW8 1320 aa8.21□□□□□ -1.09
PUM1-207ENST00000440538 FAM83GA6ND36 823 aa8.21□□□□□ -1.09
PUM1-207ENST00000440538 PNISRQ8TF01 805 aaKnown RBP8.21□□□□□ -1.09
PUM1-207ENST00000440538 HOXC9P31274 260 aa8.21□□□□□ -1.1
PUM1-207ENST00000440538 NINLQ9Y2I6 1382 aa8.21□□□□□ -1.1
PUM1-207ENST00000440538 CPSF1Q10570 1443 aaKnown RBP8.21□□□□□ -1.1
PUM1-207ENST00000440538 KAT6BQ8WYB5 2073 aa8.2□□□□□ -1.1
PUM1-207ENST00000440538 KCNH5Q8NCM2 988 aa8.2□□□□□ -1.1
PUM1-207ENST00000440538 SYTL4Q96C24 671 aaPredicted RBP8.2□□□□□ -1.1
PUM1-207ENST00000440538 PARD3Q8TEW0 1356 aa8.2□□□□□ -1.1
PUM1-207ENST00000440538 ELL2O00472 640 aaPredicted RBP8.2□□□□□ -1.1
PUM1-207ENST00000440538 LARP1Q6PKG0 1096 aaKnown RBP8.2□□□□□ -1.1
PUM1-207ENST00000440538 ANKARQ7Z5J8 1434 aa8.2□□□□□ -1.1
PUM1-207ENST00000440538 NBPF6Q5VWK0 638 aa8.2□□□□□ -1.1
PUM1-207ENST00000440538 NBPF4Q96M43 638 aa8.2□□□□□ -1.1
PUM1-207ENST00000440538 EYA1Q99502 592 aa8.2□□□□□ -1.1
PUM1-207ENST00000440538 POLR3AO14802 1390 aaPredicted RBP8.19□□□□□ -1.1
PUM1-207ENST00000440538 PHACTR3Q96KR7 559 aa8.19□□□□□ -1.1
PUM1-207ENST00000440538 TCERG1O14776 1098 aaKnown RBP8.19□□□□□ -1.1
PUM1-207ENST00000440538 RTL5Q5HYW3 569 aaPredicted RBP8.19□□□□□ -1.1
PUM1-207ENST00000440538 MIS18AQ9NYP9 233 aa8.19□□□□□ -1.1
PUM1-207ENST00000440538 TCP11L2Q8N4U5 519 aa8.19□□□□□ -1.1
PUM1-207ENST00000440538 CDCA7LQ96GN5 454 aa8.19□□□□□ -1.1
PUM1-207ENST00000440538 PHF23Q9BUL5 403 aaPredicted RBP8.19□□□□□ -1.1
PUM1-207ENST00000440538 ZBTB47Q9UFB7 747 aaPredicted RBP8.19□□□□□ -1.1
PUM1-207ENST00000440538 SOS2Q07890 1332 aaPredicted RBP8.18□□□□□ -1.1
PUM1-207ENST00000440538 RIPK4P57078 832 aa8.18□□□□□ -1.1
PUM1-207ENST00000440538 ARHGEF25Q86VW2 580 aa8.18□□□□□ -1.1
PUM1-207ENST00000440538 RAPGEF4Q8WZA2 1011 aa8.18□□□□□ -1.1
PUM1-207ENST00000440538 USP32Q8NFA0 1604 aa8.17□□□□□ -1.1
PUM1-207ENST00000440538 MCM10Q7L590 875 aa8.17□□□□□ -1.1
PUM1-207ENST00000440538 IPO9Q96P70 1041 aaKnown RBP8.17□□□□□ -1.1
PUM1-207ENST00000440538 SKAP1Q86WV1 359 aa8.17□□□□□ -1.1
PUM1-207ENST00000440538 NECTIN2Q92692 538 aa8.17□□□□□ -1.1
PUM1-207ENST00000440538 ZNF428Q96B54 188 aa8.17□□□□□ -1.1
PUM1-207ENST00000440538 CDC42BPGQ6DT37 1551 aa8.17□□□□□ -1.1
PUM1-207ENST00000440538 ANP32AP39687 249 aaKnown RBP8.17□□□□□ -1.1
PUM1-207ENST00000440538 FAM98CQ17RN3 349 aaKnown RBP8.17□□□□□ -1.1
PUM1-207ENST00000440538 LTBP4Q8N2S1 1624 aa8.17□□□□□ -1.1
PUM1-207ENST00000440538 MYOM1P52179 1685 aa8.16□□□□□ -1.1
PUM1-207ENST00000440538 TNS3Q68CZ2 1445 aa8.16□□□□□ -1.1
PUM1-207ENST00000440538 IP6K1Q92551 441 aa8.16□□□□□ -1.1
PUM1-207ENST00000440538 SRCAPQ6ZRS2 3230 aa8.16□□□□□ -1.1
PUM1-207ENST00000440538 MPRIPQ6WCQ1 1025 aa8.16□□□□□ -1.1
PUM1-207ENST00000440538 BRD4O60885 1362 aaPredicted RBP8.16□□□□□ -1.1
PUM1-207ENST00000440538 IL13P35225 146 aa8.16□□□□□ -1.1
PUM1-207ENST00000440538 KNDC1Q76NI1 1749 aa8.15□□□□□ -1.1
PUM1-207ENST00000440538 ARXQ96QS3 562 aa8.15□□□□□ -1.1
PUM1-207ENST00000440538 USP21Q9UK80 565 aa8.15□□□□□ -1.1
PUM1-207ENST00000440538 NWD1Q149M9 1564 aa8.15□□□□□ -1.1
PUM1-207ENST00000440538 ARHGEF10O15013 1369 aa8.15□□□□□ -1.1
PUM1-207ENST00000440538 BCL2L13Q9BXK5 485 aa8.15□□□□□ -1.1
PUM1-207ENST00000440538 ZNF530Q6P9A1 599 aaPredicted RBP8.15□□□□□ -1.11
PUM1-207ENST00000440538 TSR2Q969E8 191 aaKnown RBP8.15□□□□□ -1.11
PUM1-207ENST00000440538 FLT4P35916 1363 aa8.14□□□□□ -1.11
PUM1-207ENST00000440538 FMN2Q9NZ56 1722 aa8.14□□□□□ -1.11
PUM1-207ENST00000440538 RTF1Q92541 710 aaKnown RBP8.14□□□□□ -1.11
PUM1-207ENST00000440538 ACSBG1Q96GR2 724 aa8.14□□□□□ -1.11
PUM1-207ENST00000440538 NSD2O96028 1365 aa8.14□□□□□ -1.11
PUM1-207ENST00000440538 DCCP43146 1447 aa8.14□□□□□ -1.11
PUM1-207ENST00000440538 ZNF330Q9Y3S2 320 aaPredicted RBP8.14□□□□□ -1.11
PUM1-207ENST00000440538 ROBO1Q9Y6N7 1651 aa8.14□□□□□ -1.11
PUM1-207ENST00000440538 ERICH6BQ5W0A0 696 aa8.13□□□□□ -1.11
PUM1-207ENST00000440538 RUNDC1Q96C34 613 aa8.13□□□□□ -1.11
PUM1-207ENST00000440538 ZBED9Q6R2W3 1325 aa8.13□□□□□ -1.11
PUM1-207ENST00000440538 MTHFSDQ2M296 383 aaKnown RBP8.13□□□□□ -1.11
PUM1-207ENST00000440538 NCOA3Q9Y6Q9 1424 aa8.13□□□□□ -1.11
PUM1-207ENST00000440538 TATP17735 454 aaPredicted RBP8.12□□□□□ -1.11
PUM1-207ENST00000440538 C1orf141Q5JVX7 400 aa8.12□□□□□ -1.11
PUM1-207ENST00000440538 ERBB3P21860 1342 aa8.12□□□□□ -1.11
PUM1-207ENST00000440538 AFF2P51816 1311 aa8.12□□□□□ -1.11
PUM1-207ENST00000440538 SBNO1A3KN83 1393 aa8.12□□□□□ -1.11
PUM1-207ENST00000440538 PNPLA6Q8IY17 1366 aa8.12□□□□□ -1.11
PUM1-207ENST00000440538 OVOS2A0A0J9YW53 1432 aa8.12□□□□□ -1.11
PUM1-207ENST00000440538 OVOS2Q6IE36 1432 aa8.12□□□□□ -1.11
PUM1-207ENST00000440538 ILDR1Q86SU0 546 aaPredicted RBP8.12□□□□□ -1.11
PUM1-207ENST00000440538 SMG6Q86US8 1419 aaKnown RBP8.12□□□□□ -1.11
PUM1-207ENST00000440538 XIRP1Q702N8 1843 aaKnown RBP8.12□□□□□ -1.11
PUM1-207ENST00000440538 QTRT2Q9H974 415 aaKnown RBP8.12□□□□□ -1.11
PUM1-207ENST00000440538 ITSN1Q15811 1721 aa8.12□□□□□ -1.11
PUM1-207ENST00000440538 ADGRB2O60241 1585 aa8.12□□□□□ -1.11
PUM1-207ENST00000440538 SSH2Q76I76 1423 aa8.11□□□□□ -1.11
PUM1-207ENST00000440538 TMPOP42166 694 aaKnown RBP8.11□□□□□ -1.11
PUM1-207ENST00000440538 RSPH6AQ9H0K4 717 aa8.11□□□□□ -1.11
PUM1-207ENST00000440538 BRPF3Q9ULD4 1205 aa8.11□□□□□ -1.11
PUM1-207ENST00000440538 LGR6Q9HBX8 967 aa8.11□□□□□ -1.11
PUM1-207ENST00000440538 SPINK5Q9NQ38 1064 aaPredicted RBP8.11□□□□□ -1.11
PUM1-207ENST00000440538 PXDNQ92626 1479 aa8.11□□□□□ -1.11
PUM1-207ENST00000440538 SLC4A3P48751 1232 aa8.11□□□□□ -1.11
PUM1-207ENST00000440538 KRT24Q2M2I5 525 aa8.11□□□□□ -1.11
PUM1-207ENST00000440538 NGEFQ8N5V2 710 aa8.11□□□□□ -1.11
PUM1-207ENST00000440538 JCADQ9P266 1359 aa8.11□□□□□ -1.11
PUM1-207ENST00000440538 SLC39A6Q13433 755 aa8.1□□□□□ -1.11
PUM1-207ENST00000440538 PTCD1O75127 700 aaKnown RBP8.1□□□□□ -1.11
PUM1-207ENST00000440538 FCHSD2O94868 740 aa8.1□□□□□ -1.11
PUM1-207ENST00000440538 KCNQ4P56696 695 aa8.1□□□□□ -1.11
PUM1-207ENST00000440538 NPC1L1Q9UHC9 1359 aa8.1□□□□□ -1.11
PUM1-207ENST00000440538 TEFQ10587 303 aa8.1□□□□□ -1.11
PUM1-207ENST00000440538 FRAT1Q92837 279 aaPredicted RBP8.1□□□□□ -1.11
PUM1-207ENST00000440538 EP400Q96L91 3159 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms