RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 PARP4Q9UKK3 1724 aaKnown RBP29.42■■■□□ 2.3
CPNE1-219ENST00000440240 NBPF14Q5TI25 921 aa29.41■■■□□ 2.3
CPNE1-219ENST00000440240 AKAP12Q02952 1782 aa29.41■■■□□ 2.3
CPNE1-219ENST00000440240 COL18A1P39060 1754 aa29.4■■■□□ 2.3
CPNE1-219ENST00000440240 CSB-PGBD3P0DP91 1061 aa29.4■■■□□ 2.3
CPNE1-219ENST00000440240 CARD10Q9BWT7 1032 aa29.4■■■□□ 2.3
CPNE1-219ENST00000440240 OVOS2A0A0G2JMS6 1433 aa29.39■■■□□ 2.3
CPNE1-219ENST00000440240 OVOS2A0A0J9YW53 1432 aa29.39■■■□□ 2.3
CPNE1-219ENST00000440240 OVOS2Q6IE36 1432 aa29.39■■■□□ 2.3
CPNE1-219ENST00000440240 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.39■■■□□ 2.3
CPNE1-219ENST00000440240 TMC1Q8TDI8 760 aa29.39■■■□□ 2.3
CPNE1-219ENST00000440240 HDGFL2Q7Z4V5 671 aaPredicted RBP29.38■■■□□ 2.29
CPNE1-219ENST00000440240 PUS7Q96PZ0 661 aaKnown RBP29.37■■■□□ 2.29
CPNE1-219ENST00000440240 USP31Q70CQ4 1352 aa29.36■■■□□ 2.29
CPNE1-219ENST00000440240 SLC12A5Q9H2X9 1139 aa29.35■■■□□ 2.29
CPNE1-219ENST00000440240 TERF2IPQ9NYB0 399 aa29.34■■■□□ 2.29
CPNE1-219ENST00000440240 PLSCR1O15162 318 aa29.33■■■□□ 2.29
CPNE1-219ENST00000440240 EXOC5O00471 708 aa29.32■■■□□ 2.28
CPNE1-219ENST00000440240 SLC24A1O60721 1099 aa29.32■■■□□ 2.28
CPNE1-219ENST00000440240 NME9Q86XW9 330 aa29.32■■■□□ 2.28
CPNE1-219ENST00000440240 BCL11BQ9C0K0 894 aaPredicted RBP29.32■■■□□ 2.28
CPNE1-219ENST00000440240 NFAT5O94916 1531 aa29.31■■■□□ 2.28
CPNE1-219ENST00000440240 MARCH10Q8NA82 808 aaPredicted RBP29.31■■■□□ 2.28
CPNE1-219ENST00000440240 CD163L1Q9NR16 1453 aa29.3■■■□□ 2.28
CPNE1-219ENST00000440240 CCDC7Q96M83 1385 aa29.3■■■□□ 2.28
CPNE1-219ENST00000440240 MON2Q7Z3U7 1717 aa29.29■■■□□ 2.28
CPNE1-219ENST00000440240 LRRC37A3O60309 1634 aa29.28■■■□□ 2.28
CPNE1-219ENST00000440240 ABCC6O95255 1503 aa29.28■■■□□ 2.28
CPNE1-219ENST00000440240 PEAK1Q9H792 1746 aa29.28■■■□□ 2.28
CPNE1-219ENST00000440240 BCL9O00512 1426 aa29.28■■■□□ 2.28
CPNE1-219ENST00000440240 RREB1Q92766 1687 aa29.27■■■□□ 2.28
CPNE1-219ENST00000440240 EDC4Q6P2E9 1401 aaKnown RBP29.27■■■□□ 2.28
CPNE1-219ENST00000440240 RGPD5Q99666 1765 aa29.25■■■□□ 2.27
CPNE1-219ENST00000440240 ST20-MTHFSA0A0A6YYL1 179 aa29.24■■■□□ 2.27
CPNE1-219ENST00000440240 TRIM26Q12899 539 aaPredicted RBP29.24■■■□□ 2.27
CPNE1-219ENST00000440240 NLRP2Q9NX02 1062 aa29.24■■■□□ 2.27
CPNE1-219ENST00000440240 ERBB3P21860 1342 aa29.23■■■□□ 2.27
CPNE1-219ENST00000440240 TESK2Q96S53 571 aa29.23■■■□□ 2.27
CPNE1-219ENST00000440240 NUP188Q5SRE5 1749 aa29.23■■■□□ 2.27
CPNE1-219ENST00000440240 A0A1W2PP64 1363 aa29.22■■■□□ 2.27
CPNE1-219ENST00000440240 PTF1AQ7RTS3 328 aa29.21■■■□□ 2.27
CPNE1-219ENST00000440240 NINLQ9Y2I6 1382 aa29.21■■■□□ 2.27
CPNE1-219ENST00000440240 SBF2Q86WG5 1849 aa29.2■■■□□ 2.26
CPNE1-219ENST00000440240 USP54Q70EL1 1684 aa29.19■■■□□ 2.26
CPNE1-219ENST00000440240 ANKRD24Q8TF21 1146 aa29.19■■■□□ 2.26
CPNE1-219ENST00000440240 WNK3Q9BYP7 1800 aa29.19■■■□□ 2.26
CPNE1-219ENST00000440240 SPON1Q9HCB6 807 aa29.18■■■□□ 2.26
CPNE1-219ENST00000440240 IL2RBP14784 551 aa29.17■■■□□ 2.26
CPNE1-219ENST00000440240 PROM2Q8N271 834 aa29.16■■■□□ 2.26
CPNE1-219ENST00000440240 RGPD3A6NKT7 1758 aaPredicted RBP29.16■■■□□ 2.26
CPNE1-219ENST00000440240 RGPD4Q7Z3J3 1758 aa29.16■■■□□ 2.26
CPNE1-219ENST00000440240 TNS2Q63HR2 1409 aa29.15■■■□□ 2.26
CPNE1-219ENST00000440240 KCNQ2O43526 872 aa29.15■■■□□ 2.26
CPNE1-219ENST00000440240 IP6K1Q92551 441 aa29.14■■■□□ 2.26
CPNE1-219ENST00000440240 COG3Q96JB2 828 aa29.14■■■□□ 2.26
CPNE1-219ENST00000440240 TXNRD1Q16881 649 aa29.12■■■□□ 2.25
CPNE1-219ENST00000440240 PPP1R1BQ9UD71 204 aaPredicted RBP29.11■■■□□ 2.25
CPNE1-219ENST00000440240 ANO8Q9HCE9 1232 aaPredicted RBP29.1■■■□□ 2.25
CPNE1-219ENST00000440240 LTN1O94822 1766 aa29.09■■■□□ 2.25
CPNE1-219ENST00000440240 TMF1P82094 1093 aa29.09■■■□□ 2.25
CPNE1-219ENST00000440240 ANKRD36BQ8N2N9 1353 aa29.06■■■□□ 2.24
CPNE1-219ENST00000440240 ACSBG1Q96GR2 724 aa29.06■■■□□ 2.24
CPNE1-219ENST00000440240 STK32BQ9NY57 414 aa29.06■■■□□ 2.24
CPNE1-219ENST00000440240 LTV1Q96GA3 475 aaPredicted RBP29.05■■■□□ 2.24
CPNE1-219ENST00000440240 AMPHP49418 695 aa29.04■■■□□ 2.24
CPNE1-219ENST00000440240 MAP3K19Q56UN5 1328 aa29.03■■■□□ 2.24
CPNE1-219ENST00000440240 SLC15A2Q16348 729 aa29.03■■■□□ 2.24
CPNE1-219ENST00000440240 CDCA8Q53HL2 280 aa29.03■■■□□ 2.24
CPNE1-219ENST00000440240 USP47Q96K76 1375 aa29.02■■■□□ 2.24
CPNE1-219ENST00000440240 HOXC9P31274 260 aa29.02■■■□□ 2.24
CPNE1-219ENST00000440240 FYB1O15117 783 aa28.99■■■□□ 2.23
CPNE1-219ENST00000440240 FBLN1P23142 703 aa28.99■■■□□ 2.23
CPNE1-219ENST00000440240 DDX54Q8TDD1 881 aaKnown RBP28.99■■■□□ 2.23
CPNE1-219ENST00000440240 PDGFDQ9GZP0 370 aaPredicted RBP28.99■■■□□ 2.23
CPNE1-219ENST00000440240 TIMELESSQ9UNS1 1208 aa28.99■■■□□ 2.23
CPNE1-219ENST00000440240 DCAF8L1A6NGE4 600 aa28.98■■■□□ 2.23
CPNE1-219ENST00000440240 NHSQ6T4R5 1651 aa28.97■■■□□ 2.23
CPNE1-219ENST00000440240 ZBTB7AO95365 584 aa28.96■■■□□ 2.23
CPNE1-219ENST00000440240 GGNBP2Q9H3C7 697 aa28.95■■■□□ 2.22
CPNE1-219ENST00000440240 KAT6BQ8WYB5 2073 aa28.93■■■□□ 2.22
CPNE1-219ENST00000440240 FAM208AQ9UK61 1670 aaKnown RBP28.93■■■□□ 2.22
CPNE1-219ENST00000440240 ATF5Q9Y2D1 282 aaPredicted RBP28.93■■■□□ 2.22
CPNE1-219ENST00000440240 RTL1A6NKG5 1358 aa28.92■■■□□ 2.22
CPNE1-219ENST00000440240 RRS1Q15050 365 aaKnown RBP28.92■■■□□ 2.22
CPNE1-219ENST00000440240 ZCRB1Q8TBF4 217 aaKnown RBP28.92■■■□□ 2.22
CPNE1-219ENST00000440240 CASZ1Q86V15 1759 aa28.92■■■□□ 2.22
CPNE1-219ENST00000440240 MTFR1LQ9H019 292 aa28.91■■■□□ 2.22
CPNE1-219ENST00000440240 PTGER2P43116 358 aa28.9■■■□□ 2.22
CPNE1-219ENST00000440240 SLC27A3Q5K4L6 730 aa28.88■■■□□ 2.21
CPNE1-219ENST00000440240 NBPF6Q5VWK0 638 aa28.88■■■□□ 2.21
CPNE1-219ENST00000440240 NBPF4Q96M43 638 aa28.88■■■□□ 2.21
CPNE1-219ENST00000440240 PRIM1P49642 420 aaKnown RBP28.87■■■□□ 2.21
CPNE1-219ENST00000440240 SYTL4Q96C24 671 aaPredicted RBP28.87■■■□□ 2.21
CPNE1-219ENST00000440240 LRRC4BQ9NT99 713 aa28.87■■■□□ 2.21
CPNE1-219ENST00000440240 CGNL1Q0VF96 1302 aa28.87■■■□□ 2.21
CPNE1-219ENST00000440240 CLSPNQ9HAW4 1339 aa28.87■■■□□ 2.21
CPNE1-219ENST00000440240 BTAF1O14981 1849 aa28.86■■■□□ 2.21
CPNE1-219ENST00000440240 SMG6Q86US8 1419 aaKnown RBP28.86■■■□□ 2.21
CPNE1-219ENST00000440240 RAPGEF4Q8WZA2 1011 aa28.85■■■□□ 2.21
CPNE1-219ENST00000440240 YY1P25490 414 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms