RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 LRSAM1Q6UWE0 723 aa14.23□□□□□ -0.13
SMPD4-209ENST00000439886 TSHZ3Q63HK5 1081 aa14.22□□□□□ -0.13
SMPD4-209ENST00000439886 TSPYL6Q8N831 410 aa14.22□□□□□ -0.13
SMPD4-209ENST00000439886 RILPL2Q969X0 211 aa14.22□□□□□ -0.13
SMPD4-209ENST00000439886 CHAF1AQ13111 956 aaPredicted RBP14.22□□□□□ -0.13
SMPD4-209ENST00000439886 TRIM35Q9UPQ4 493 aa14.22□□□□□ -0.13
SMPD4-209ENST00000439886 SYAP1Q96A49 352 aaPredicted RBP14.22□□□□□ -0.13
SMPD4-209ENST00000439886 LARP6Q9BRS8 491 aaKnown RBP14.21□□□□□ -0.13
SMPD4-209ENST00000439886 GRIN2AQ12879 1464 aa14.21□□□□□ -0.13
SMPD4-209ENST00000439886 NUP160Q12769 1436 aa14.21□□□□□ -0.13
SMPD4-209ENST00000439886 ZNF500O60304 480 aaPredicted RBP14.21□□□□□ -0.13
SMPD4-209ENST00000439886 CCDC27Q2M243 656 aa14.21□□□□□ -0.13
SMPD4-209ENST00000439886 ZNF771Q7L3S4 317 aaPredicted RBP14.21□□□□□ -0.13
SMPD4-209ENST00000439886 RGS22Q8NE09 1264 aa14.21□□□□□ -0.13
SMPD4-209ENST00000439886 BCCIPQ9P287 314 aaKnown RBP eCLIP14.21□□□□□ -0.13
SMPD4-209ENST00000439886 KANK1Q14678 1352 aa14.2□□□□□ -0.14
SMPD4-209ENST00000439886 UPF3BQ9BZI7 483 aaKnown RBP14.2□□□□□ -0.14
SMPD4-209ENST00000439886 ANO2Q9NQ90 1003 aa14.2□□□□□ -0.14
SMPD4-209ENST00000439886 SYCP2Q9BX26 1530 aa14.2□□□□□ -0.14
SMPD4-209ENST00000439886 MINK1Q8N4C8 1332 aaPredicted RBP14.2□□□□□ -0.14
SMPD4-209ENST00000439886 SHANK2Q9UPX8 1470 aa14.2□□□□□ -0.14
SMPD4-209ENST00000439886 ADCY10Q96PN6 1610 aa14.2□□□□□ -0.14
SMPD4-209ENST00000439886 DRC7Q8IY82 874 aa14.2□□□□□ -0.14
SMPD4-209ENST00000439886 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.2□□□□□ -0.14
SMPD4-209ENST00000439886 NPC1L1Q9UHC9 1359 aa14.19□□□□□ -0.14
SMPD4-209ENST00000439886 KIF20AO95235 890 aa14.19□□□□□ -0.14
SMPD4-209ENST00000439886 GSPT1P15170 499 aaKnown RBP14.19□□□□□ -0.14
SMPD4-209ENST00000439886 SCAPERQ9BY12 1400 aa14.19□□□□□ -0.14
SMPD4-209ENST00000439886 CT47B1P0C2W7 299 aaPredicted RBP14.19□□□□□ -0.14
SMPD4-209ENST00000439886 CCDC94Q9BW85 323 aaPredicted RBP14.19□□□□□ -0.14
SMPD4-209ENST00000439886 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.19□□□□□ -0.14
SMPD4-209ENST00000439886 ZBTB7BO15156 539 aaPredicted RBP14.19□□□□□ -0.14
SMPD4-209ENST00000439886 EIF2AK4Q9P2K8 1649 aaKnown RBP14.18□□□□□ -0.14
SMPD4-209ENST00000439886 DCTN1Q14203 1278 aa14.18□□□□□ -0.14
SMPD4-209ENST00000439886 CWC22Q9HCG8 908 aaKnown RBP14.18□□□□□ -0.14
SMPD4-209ENST00000439886 SYNJ2O15056 1496 aa14.18□□□□□ -0.14
SMPD4-209ENST00000439886 REC8O95072 547 aa14.18□□□□□ -0.14
SMPD4-209ENST00000439886 ZSCAN20P17040 1043 aaPredicted RBP14.18□□□□□ -0.14
SMPD4-209ENST00000439886 KIF3AQ9Y496 699 aa14.18□□□□□ -0.14
SMPD4-209ENST00000439886 MBD3O95983 291 aa14.17□□□□□ -0.14
SMPD4-209ENST00000439886 SDSP20132 328 aa14.17□□□□□ -0.14
SMPD4-209ENST00000439886 HS1BP3Q53T59 392 aa14.17□□□□□ -0.14
SMPD4-209ENST00000439886 PLEKHM2Q8IWE5 1019 aa14.17□□□□□ -0.14
SMPD4-209ENST00000439886 SOX12O15370 315 aa14.17□□□□□ -0.14
SMPD4-209ENST00000439886 HCLS1P14317 486 aaPredicted RBP14.17□□□□□ -0.14
SMPD4-209ENST00000439886 NOLC1Q14978 699 aaKnown RBP eCLIP14.17□□□□□ -0.143e-9■□□□□ 10.1
SMPD4-209ENST00000439886 TWISTNBQ3B726 338 aaPredicted RBP14.17□□□□□ -0.14
SMPD4-209ENST00000439886 USP26Q9BXU7 913 aa14.17□□□□□ -0.14
SMPD4-209ENST00000439886 KCNG1Q9UIX4 513 aa14.17□□□□□ -0.14
SMPD4-209ENST00000439886 HDAC5Q9UQL6 1122 aa14.17□□□□□ -0.14
SMPD4-209ENST00000439886 EVC2Q86UK5 1308 aa14.17□□□□□ -0.14
SMPD4-209ENST00000439886 VIRMAQ69YN4 1812 aaKnown RBP14.17□□□□□ -0.14
SMPD4-209ENST00000439886 FIBPO43427 364 aa14.16□□□□□ -0.14
SMPD4-209ENST00000439886 ZBTB9Q96C00 473 aa14.16□□□□□ -0.14
SMPD4-209ENST00000439886 CLASP1Q7Z460 1538 aa14.16□□□□□ -0.14
SMPD4-209ENST00000439886 ZMYM3Q14202 1370 aa14.16□□□□□ -0.14
SMPD4-209ENST00000439886 GADD45BO75293 160 aaPredicted RBP14.16□□□□□ -0.14
SMPD4-209ENST00000439886 ADCY5O95622 1261 aa14.16□□□□□ -0.14
SMPD4-209ENST00000439886 TERF1P54274 439 aa14.16□□□□□ -0.14
SMPD4-209ENST00000439886 PDCL2Q8N4E4 241 aa14.16□□□□□ -0.14
SMPD4-209ENST00000439886 SIRT2Q8IXJ6 389 aa14.16□□□□□ -0.14
SMPD4-209ENST00000439886 ZNF592Q92610 1267 aa14.16□□□□□ -0.14
SMPD4-209ENST00000439886 CROCC2H7BZ55 1655 aa14.15□□□□□ -0.14
SMPD4-209ENST00000439886 LETM1O95202 739 aaPredicted RBP14.15□□□□□ -0.14
SMPD4-209ENST00000439886 TTC22Q5TAA0 569 aa14.15□□□□□ -0.14
SMPD4-209ENST00000439886 TMX3Q96JJ7 454 aa14.15□□□□□ -0.14
SMPD4-209ENST00000439886 ABCC10Q5T3U5 1492 aa14.15□□□□□ -0.14
SMPD4-209ENST00000439886 NCOA3Q9Y6Q9 1424 aa14.15□□□□□ -0.14
SMPD4-209ENST00000439886 CDC42BPAQ5VT25 1732 aa14.15□□□□□ -0.14
SMPD4-209ENST00000439886 PHF14O94880 888 aa14.14□□□□□ -0.15
SMPD4-209ENST00000439886 CHRM1P11229 460 aaPredicted RBP14.14□□□□□ -0.15
SMPD4-209ENST00000439886 MCCP23508 829 aa14.14□□□□□ -0.15
SMPD4-209ENST00000439886 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.14□□□□□ -0.15
SMPD4-209ENST00000439886 PHF23Q9BUL5 403 aaPredicted RBP14.14□□□□□ -0.15
SMPD4-209ENST00000439886 CHMP4CQ96CF2 233 aa14.14□□□□□ -0.15
SMPD4-209ENST00000439886 ERVK-7P63135 1459 aa14.14□□□□□ -0.15
SMPD4-209ENST00000439886 PPIP5K1Q6PFW1 1433 aa14.14□□□□□ -0.15
SMPD4-209ENST00000439886 SYNMO15061 1565 aa14.14□□□□□ -0.15
SMPD4-209ENST00000439886 FAM83GA6ND36 823 aa14.13□□□□□ -0.15
SMPD4-209ENST00000439886 U2AF2P26368 475 aaKnown RBP eCLIP14.13□□□□□ -0.15
SMPD4-209ENST00000439886 MCM5P33992 734 aa14.13□□□□□ -0.15
SMPD4-209ENST00000439886 HMGN5P82970 282 aaKnown RBP14.13□□□□□ -0.15
SMPD4-209ENST00000439886 PDLIM2Q96JY6 352 aa14.13□□□□□ -0.15
SMPD4-209ENST00000439886 ZDHHC9Q9Y397 364 aa14.13□□□□□ -0.15
SMPD4-209ENST00000439886 ERC2O15083 957 aa14.13□□□□□ -0.15
SMPD4-209ENST00000439886 MYCNP04198 464 aaPredicted RBP14.13□□□□□ -0.15
SMPD4-209ENST00000439886 RNF216Q9NWF9 866 aaPredicted RBP14.13□□□□□ -0.15
SMPD4-209ENST00000439886 MYRIPQ8NFW9 859 aa14.13□□□□□ -0.15
SMPD4-209ENST00000439886 GTPBP4Q9BZE4 634 aaKnown RBP14.13□□□□□ -0.15
SMPD4-209ENST00000439886 KCNJ4P48050 445 aa14.12□□□□□ -0.15
SMPD4-209ENST00000439886 KRT24Q2M2I5 525 aa14.12□□□□□ -0.15
SMPD4-209ENST00000439886 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.12□□□□□ -0.15
SMPD4-209ENST00000439886 NECTIN2Q92692 538 aa14.12□□□□□ -0.15
SMPD4-209ENST00000439886 PHACTR3Q96KR7 559 aa14.12□□□□□ -0.15
SMPD4-209ENST00000439886 API5Q9BZZ5 524 aaKnown RBP14.12□□□□□ -0.15
SMPD4-209ENST00000439886 MAP4K4O95819 1239 aaPredicted RBP14.11□□□□□ -0.15
SMPD4-209ENST00000439886 ALDH1L2Q3SY69 923 aa14.11□□□□□ -0.15
SMPD4-209ENST00000439886 TAF3Q5VWG9 929 aa14.11□□□□□ -0.15
SMPD4-209ENST00000439886 USP48Q86UV5 1035 aa14.11□□□□□ -0.15
SMPD4-209ENST00000439886 EXOC6BQ9Y2D4 811 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms