RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 ZKSCAN5Q9Y2L8 839 aa19.3■□□□□ 0.68
DHFR-201ENST00000439211 WAPLQ7Z5K2 1190 aa19.29■□□□□ 0.68
DHFR-201ENST00000439211 ZNF830Q96NB3 372 aaPredicted RBP19.29■□□□□ 0.68
DHFR-201ENST00000439211 NOL7Q9UMY1 257 aaKnown RBP19.29■□□□□ 0.68
DHFR-201ENST00000439211 KIF3AQ9Y496 699 aa19.29■□□□□ 0.68
DHFR-201ENST00000439211 PPP1R9BQ96SB3 815 aa19.28■□□□□ 0.68
DHFR-201ENST00000439211 UHRF1BP1LA0JNW5 1464 aa19.28■□□□□ 0.68
DHFR-201ENST00000439211 FBXO31Q5XUX0 539 aaPredicted RBP19.28■□□□□ 0.68
DHFR-201ENST00000439211 TRIM35Q9UPQ4 493 aa19.27■□□□□ 0.68
DHFR-201ENST00000439211 TMEM51Q9NW97 253 aa19.27■□□□□ 0.67
DHFR-201ENST00000439211 CCDC66A2RUB6 948 aa19.26■□□□□ 0.67
DHFR-201ENST00000439211 SLC4A10Q6U841 1118 aa19.26■□□□□ 0.67
DHFR-201ENST00000439211 IRX3P78415 501 aaPredicted RBP19.26■□□□□ 0.67
DHFR-201ENST00000439211 A0A1W2PP64 1363 aa19.26■□□□□ 0.67
DHFR-201ENST00000439211 ZFYVE16Q7Z3T8 1539 aa19.26■□□□□ 0.67
DHFR-201ENST00000439211 TRERF1Q96PN7 1200 aa19.25■□□□□ 0.67
DHFR-201ENST00000439211 SLC52A1Q9NWF4 448 aa19.25■□□□□ 0.67
DHFR-201ENST00000439211 GNAI1P63096 354 aa19.25■□□□□ 0.67
DHFR-201ENST00000439211 DCTN1Q14203 1278 aa19.25■□□□□ 0.67
DHFR-201ENST00000439211 TWISTNBQ3B726 338 aaPredicted RBP19.25■□□□□ 0.67
DHFR-201ENST00000439211 FCHSD2O94868 740 aa19.25■□□□□ 0.67
DHFR-201ENST00000439211 CASC1Q6TDU7 716 aa19.25■□□□□ 0.67
DHFR-201ENST00000439211 EMILIN1Q9Y6C2 1016 aa19.25■□□□□ 0.67
DHFR-201ENST00000439211 HDAC1Q13547 482 aaPredicted RBP19.24■□□□□ 0.67
DHFR-201ENST00000439211 RRS1Q15050 365 aaKnown RBP19.24■□□□□ 0.67
DHFR-201ENST00000439211 COG3Q96JB2 828 aa19.24■□□□□ 0.67
DHFR-201ENST00000439211 ZNF518AQ6AHZ1 1483 aa19.24■□□□□ 0.67
DHFR-201ENST00000439211 ATAD2Q6PL18 1390 aa19.23■□□□□ 0.67
DHFR-201ENST00000439211 SBNO2Q9Y2G9 1366 aa19.23■□□□□ 0.67
DHFR-201ENST00000439211 CERS3Q8IU89 383 aa19.23■□□□□ 0.67
DHFR-201ENST00000439211 NPATQ14207 1427 aa19.23■□□□□ 0.67
DHFR-201ENST00000439211 ZNF500O60304 480 aaPredicted RBP19.22■□□□□ 0.67
DHFR-201ENST00000439211 FOXD4L5Q5VV16 416 aaPredicted RBP19.22■□□□□ 0.67
DHFR-201ENST00000439211 FOXD4L4Q8WXT5 416 aaPredicted RBP19.22■□□□□ 0.67
DHFR-201ENST00000439211 SSFA2P28290 1259 aa19.22■□□□□ 0.67
DHFR-201ENST00000439211 HS1BP3Q53T59 392 aa19.22■□□□□ 0.67
DHFR-201ENST00000439211 ZBTB40Q9NUA8 1239 aa19.22■□□□□ 0.67
DHFR-201ENST00000439211 ERICH4A6NGS2 130 aa19.21■□□□□ 0.67
DHFR-201ENST00000439211 JARID2Q92833 1246 aaPredicted RBP19.21■□□□□ 0.67
DHFR-201ENST00000439211 NSD2O96028 1365 aa19.21■□□□□ 0.67
DHFR-201ENST00000439211 SPHKAPQ2M3C7 1700 aa19.21■□□□□ 0.67
DHFR-201ENST00000439211 TSPYL6Q8N831 410 aa19.21■□□□□ 0.67
DHFR-201ENST00000439211 CIZ1Q9ULV3 898 aaPredicted RBP19.21■□□□□ 0.67
DHFR-201ENST00000439211 LMOD3Q0VAK6 560 aa19.2■□□□□ 0.66
DHFR-201ENST00000439211 SMC5Q8IY18 1101 aa19.2■□□□□ 0.66
DHFR-201ENST00000439211 PHACTR3Q96KR7 559 aa19.2■□□□□ 0.66
DHFR-201ENST00000439211 APPP05067 770 aa19.2■□□□□ 0.66
DHFR-201ENST00000439211 TXNDC2Q86VQ3 553 aa19.2■□□□□ 0.66
DHFR-201ENST00000439211 NFE2L2Q16236 605 aa19.19■□□□□ 0.66
DHFR-201ENST00000439211 NME9Q86XW9 330 aa19.19■□□□□ 0.66
DHFR-201ENST00000439211 API5Q9BZZ5 524 aaKnown RBP19.19■□□□□ 0.66
DHFR-201ENST00000439211 FAM83GA6ND36 823 aa19.19■□□□□ 0.66
DHFR-201ENST00000439211 MCM5P33992 734 aa19.19■□□□□ 0.66
DHFR-201ENST00000439211 NUCB1Q02818 461 aa19.19■□□□□ 0.66
DHFR-201ENST00000439211 NOL8Q76FK4 1167 aaKnown RBP19.19■□□□□ 0.66
DHFR-201ENST00000439211 GCC1Q96CN9 775 aa19.19■□□□□ 0.66
DHFR-201ENST00000439211 MYOM2P54296 1465 aa19.18■□□□□ 0.66
DHFR-201ENST00000439211 IQGAP1P46940 1657 aa19.18■□□□□ 0.66
DHFR-201ENST00000439211 PRPF40AO75400 957 aaKnown RBP19.18■□□□□ 0.66
DHFR-201ENST00000439211 KLHL40Q2TBA0 621 aa19.18■□□□□ 0.66
DHFR-201ENST00000439211 RBM42Q9BTD8 480 aaKnown RBP19.18■□□□□ 0.66
DHFR-201ENST00000439211 PHF23Q9BUL5 403 aaPredicted RBP19.18■□□□□ 0.66
DHFR-201ENST00000439211 SHROOM2Q13796 1616 aa19.18■□□□□ 0.66
DHFR-201ENST00000439211 RNF17Q9BXT8 1623 aaKnown RBP19.18■□□□□ 0.66
DHFR-201ENST00000439211 MAP3K4Q9Y6R4 1608 aa19.17■□□□□ 0.66
DHFR-201ENST00000439211 ABCC11Q96J66 1382 aa19.17■□□□□ 0.66
DHFR-201ENST00000439211 TET3O43151 1660 aa19.17■□□□□ 0.66
DHFR-201ENST00000439211 ALDH1L2Q3SY69 923 aa19.17■□□□□ 0.66
DHFR-201ENST00000439211 C14orf37Q86TY3 774 aa19.17■□□□□ 0.66
DHFR-201ENST00000439211 MYRIPQ8NFW9 859 aa19.17■□□□□ 0.66
DHFR-201ENST00000439211 ZFP91Q96JP5 570 aaPredicted RBP19.17■□□□□ 0.66
DHFR-201ENST00000439211 ZRANB1Q9UGI0 708 aa19.17■□□□□ 0.66
DHFR-201ENST00000439211 CLASP1Q7Z460 1538 aa19.17■□□□□ 0.66
DHFR-201ENST00000439211 U2AF2P26368 475 aaKnown RBP eCLIP19.17■□□□□ 0.66
DHFR-201ENST00000439211 DNAJC2Q99543 621 aaKnown RBP19.16■□□□□ 0.66
DHFR-201ENST00000439211 CDC45O75419 566 aa19.16■□□□□ 0.66
DHFR-201ENST00000439211 RTF1Q92541 710 aaKnown RBP19.16■□□□□ 0.66
DHFR-201ENST00000439211 RBSNQ9H1K0 784 aa19.16■□□□□ 0.66
DHFR-201ENST00000439211 POLKQ9UBT6 870 aa19.16■□□□□ 0.66
DHFR-201ENST00000439211 PLEKHF1Q96S99 279 aa19.15■□□□□ 0.66
DHFR-201ENST00000439211 PRIM1P49642 420 aaKnown RBP19.15■□□□□ 0.66
DHFR-201ENST00000439211 ATP2B3Q16720 1220 aa19.15■□□□□ 0.66
DHFR-201ENST00000439211 DIAPH3Q9NSV4 1193 aa19.15■□□□□ 0.66
DHFR-201ENST00000439211 ABCA6Q8N139 1617 aa19.15■□□□□ 0.66
DHFR-201ENST00000439211 TBC1D9Q6ZT07 1266 aa19.15■□□□□ 0.66
DHFR-201ENST00000439211 PRIMPOLQ96LW4 560 aa19.15■□□□□ 0.66
DHFR-201ENST00000439211 MBIPQ9NS73 344 aa19.15■□□□□ 0.66
DHFR-201ENST00000439211 ZSCAN23Q3MJ62 389 aa19.14■□□□□ 0.66
DHFR-201ENST00000439211 NECTIN2Q92692 538 aa19.14■□□□□ 0.66
DHFR-201ENST00000439211 IL16Q14005 1332 aa19.14■□□□□ 0.65
DHFR-201ENST00000439211 SYCE3A1L190 88 aa19.14■□□□□ 0.65
DHFR-201ENST00000439211 SULT6B1Q6IMI4 303 aa19.14■□□□□ 0.65
DHFR-201ENST00000439211 K7ELQ4 463 aaPredicted RBP19.13■□□□□ 0.65
DHFR-201ENST00000439211 TIGD1Q96MW7 591 aa19.13■□□□□ 0.65
DHFR-201ENST00000439211 KLHL34Q8N239 644 aa19.13■□□□□ 0.65
DHFR-201ENST00000439211 TRIM6-TRIM34B2RNG4 842 aa19.12■□□□□ 0.65
DHFR-201ENST00000439211 BAG4O95429 457 aaKnown RBP19.12■□□□□ 0.65
DHFR-201ENST00000439211 HAP1P54257 671 aaPredicted RBP19.12■□□□□ 0.65
DHFR-201ENST00000439211 RAB3GAP1Q15042 981 aa19.12■□□□□ 0.65
DHFR-201ENST00000439211 BMP2KLQ5H9B9 411 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms