RNA–Protein interactions for RNA: ENST00000435914.1

PNKDP1-201, Transcript of PNKD pseudogene 1, humanhuman

BASIC

Gene PNKDP1, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKDP1-201ENST00000435914 ABCC6O95255 1503 aa8.85□□□□□ -0.99
PNKDP1-201ENST00000435914 TTC21AQ8NDW8 1320 aa8.85□□□□□ -0.99
PNKDP1-201ENST00000435914 WDR17Q8IZU2 1322 aa8.84□□□□□ -0.99
PNKDP1-201ENST00000435914 RGPD3A6NKT7 1758 aaPredicted RBP8.84□□□□□ -0.99
PNKDP1-201ENST00000435914 RGPD4Q7Z3J3 1758 aa8.84□□□□□ -0.99
PNKDP1-201ENST00000435914 BCL9O00512 1426 aa8.84□□□□□ -0.99
PNKDP1-201ENST00000435914 PDE3BQ13370 1112 aa8.84□□□□□ -0.99
PNKDP1-201ENST00000435914 KTN1Q86UP2 1357 aaKnown RBP8.84□□□□□ -0.99
PNKDP1-201ENST00000435914 OVOS2A0A0G2JMS6 1433 aa8.83□□□□□ -1
PNKDP1-201ENST00000435914 OVOS2A0A0J9YW53 1432 aa8.83□□□□□ -1
PNKDP1-201ENST00000435914 OVOS2Q6IE36 1432 aa8.83□□□□□ -1
PNKDP1-201ENST00000435914 APBA3O96018 575 aa8.83□□□□□ -1
PNKDP1-201ENST00000435914 R3HDM1Q15032 1099 aaKnown RBP8.83□□□□□ -1
PNKDP1-201ENST00000435914 KCNH5Q8NCM2 988 aa8.83□□□□□ -1
PNKDP1-201ENST00000435914 PUS7Q96PZ0 661 aaKnown RBP8.82□□□□□ -1
PNKDP1-201ENST00000435914 TESK2Q96S53 571 aa8.82□□□□□ -1
PNKDP1-201ENST00000435914 CARD11Q9BXL7 1154 aa8.82□□□□□ -1
PNKDP1-201ENST00000435914 C11orf95C9JLR9 678 aaPredicted RBP8.81□□□□□ -1
PNKDP1-201ENST00000435914 TOM1L2Q6ZVM7 507 aa8.81□□□□□ -1
PNKDP1-201ENST00000435914 PTF1AQ7RTS3 328 aa8.81□□□□□ -1
PNKDP1-201ENST00000435914 MARCH10Q8NA82 808 aaPredicted RBP8.81□□□□□ -1
PNKDP1-201ENST00000435914 CARD10Q9BWT7 1032 aa8.81□□□□□ -1
PNKDP1-201ENST00000435914 SLC12A5Q9H2X9 1139 aa8.81□□□□□ -1
PNKDP1-201ENST00000435914 LTN1O94822 1766 aa8.81□□□□□ -1
PNKDP1-201ENST00000435914 EDC4Q6P2E9 1401 aaKnown RBP8.8□□□□□ -1
PNKDP1-201ENST00000435914 ZBTB7CA1YPR0 619 aa8.8□□□□□ -1
PNKDP1-201ENST00000435914 PLSCR1O15162 318 aa8.8□□□□□ -1
PNKDP1-201ENST00000435914 DDB1Q16531 1140 aa8.8□□□□□ -1
PNKDP1-201ENST00000435914 NME9Q86XW9 330 aa8.8□□□□□ -1
PNKDP1-201ENST00000435914 A0A1W2PP64 1363 aa8.8□□□□□ -1
PNKDP1-201ENST00000435914 TONSLQ96HA7 1378 aa8.8□□□□□ -1
PNKDP1-201ENST00000435914 ERBB3P21860 1342 aa8.8□□□□□ -1
PNKDP1-201ENST00000435914 CCDC7Q96M83 1385 aa8.79□□□□□ -1
PNKDP1-201ENST00000435914 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.79□□□□□ -1
PNKDP1-201ENST00000435914 PROM2Q8N271 834 aa8.79□□□□□ -1
PNKDP1-201ENST00000435914 CDCA7Q9BWT1 371 aaPredicted RBP8.79□□□□□ -1
PNKDP1-201ENST00000435914 TNS2Q63HR2 1409 aa8.79□□□□□ -1
PNKDP1-201ENST00000435914 CASZ1Q86V15 1759 aa8.78□□□□□ -1
PNKDP1-201ENST00000435914 SOX12O15370 315 aa8.78□□□□□ -1
PNKDP1-201ENST00000435914 BCL11BQ9C0K0 894 aaPredicted RBP8.78□□□□□ -1
PNKDP1-201ENST00000435914 ST20-MTHFSA0A0A6YYL1 179 aa8.77□□□□□ -1.01
PNKDP1-201ENST00000435914 ANO8Q9HCE9 1232 aaPredicted RBP8.77□□□□□ -1.01
PNKDP1-201ENST00000435914 NHSQ6T4R5 1651 aa8.77□□□□□ -1.01
PNKDP1-201ENST00000435914 NINLQ9Y2I6 1382 aa8.76□□□□□ -1.01
PNKDP1-201ENST00000435914 HDGFL2Q7Z4V5 671 aaPredicted RBP8.76□□□□□ -1.01
PNKDP1-201ENST00000435914 TMC1Q8TDI8 760 aa8.76□□□□□ -1.01
PNKDP1-201ENST00000435914 FAM208AQ9UK61 1670 aaKnown RBP8.75□□□□□ -1.01
PNKDP1-201ENST00000435914 EXOC5O00471 708 aa8.75□□□□□ -1.01
PNKDP1-201ENST00000435914 CSB-PGBD3P0DP91 1061 aa8.75□□□□□ -1.01
PNKDP1-201ENST00000435914 NBPF14Q5TI25 921 aa8.75□□□□□ -1.01
PNKDP1-201ENST00000435914 TERF2IPQ9NYB0 399 aa8.75□□□□□ -1.01
PNKDP1-201ENST00000435914 PAPPAQ13219 1627 aa8.75□□□□□ -1.01
PNKDP1-201ENST00000435914 KCNQ2O43526 872 aa8.74□□□□□ -1.01
PNKDP1-201ENST00000435914 ANKRD24Q8TF21 1146 aa8.74□□□□□ -1.01
PNKDP1-201ENST00000435914 IP6K1Q92551 441 aa8.74□□□□□ -1.01
PNKDP1-201ENST00000435914 PDGFDQ9GZP0 370 aaPredicted RBP8.74□□□□□ -1.01
PNKDP1-201ENST00000435914 SHANK3Q9BYB0 1731 aa8.74□□□□□ -1.01
PNKDP1-201ENST00000435914 ANKRD36BQ8N2N9 1353 aa8.73□□□□□ -1.01
PNKDP1-201ENST00000435914 BTAF1O14981 1849 aa8.73□□□□□ -1.01
PNKDP1-201ENST00000435914 IL2RBP14784 551 aa8.73□□□□□ -1.01
PNKDP1-201ENST00000435914 TRIM26Q12899 539 aaPredicted RBP8.73□□□□□ -1.01
PNKDP1-201ENST00000435914 TXNRD1Q16881 649 aa8.73□□□□□ -1.01
PNKDP1-201ENST00000435914 NLRP2Q9NX02 1062 aa8.73□□□□□ -1.01
PNKDP1-201ENST00000435914 MAP3K19Q56UN5 1328 aa8.73□□□□□ -1.01
PNKDP1-201ENST00000435914 RGPD2P0DJD1 1756 aa8.73□□□□□ -1.01
PNKDP1-201ENST00000435914 USP47Q96K76 1375 aa8.73□□□□□ -1.01
PNKDP1-201ENST00000435914 SLC24A1O60721 1099 aa8.72□□□□□ -1.01
PNKDP1-201ENST00000435914 FBLN1P23142 703 aa8.72□□□□□ -1.01
PNKDP1-201ENST00000435914 SPON1Q9HCB6 807 aa8.72□□□□□ -1.01
PNKDP1-201ENST00000435914 MYOM1P52179 1685 aa8.72□□□□□ -1.01
PNKDP1-201ENST00000435914 HOXC9P31274 260 aa8.71□□□□□ -1.02
PNKDP1-201ENST00000435914 FYB1O15117 783 aa8.7□□□□□ -1.02
PNKDP1-201ENST00000435914 PTGER2P43116 358 aa8.7□□□□□ -1.02
PNKDP1-201ENST00000435914 SLC15A2Q16348 729 aa8.7□□□□□ -1.02
PNKDP1-201ENST00000435914 ACSBG1Q96GR2 724 aa8.7□□□□□ -1.02
PNKDP1-201ENST00000435914 COG3Q96JB2 828 aa8.7□□□□□ -1.02
PNKDP1-201ENST00000435914 SGIP1Q9BQI5 828 aa8.7□□□□□ -1.02
PNKDP1-201ENST00000435914 RTL1A6NKG5 1358 aa8.7□□□□□ -1.02
PNKDP1-201ENST00000435914 MEGF6O75095 1541 aa8.7□□□□□ -1.02
PNKDP1-201ENST00000435914 KIF20BQ96Q89 1820 aa8.69□□□□□ -1.02
PNKDP1-201ENST00000435914 LRRC4BQ9NT99 713 aa8.69□□□□□ -1.02
PNKDP1-201ENST00000435914 UTRNP46939 3433 aa8.69□□□□□ -1.02
PNKDP1-201ENST00000435914 NSD2O96028 1365 aa8.69□□□□□ -1.02
PNKDP1-201ENST00000435914 LY75O60449 1722 aa8.68□□□□□ -1.02
PNKDP1-201ENST00000435914 COL24A1Q17RW2 1714 aa8.68□□□□□ -1.02
PNKDP1-201ENST00000435914 QSER1Q2KHR3 1735 aa8.68□□□□□ -1.02
PNKDP1-201ENST00000435914 DOT1LQ8TEK3 1739 aa8.68□□□□□ -1.02
PNKDP1-201ENST00000435914 TMF1P82094 1093 aa8.68□□□□□ -1.02
PNKDP1-201ENST00000435914 CARD14Q9BXL6 1004 aa8.68□□□□□ -1.02
PNKDP1-201ENST00000435914 GGNBP2Q9H3C7 697 aa8.68□□□□□ -1.02
PNKDP1-201ENST00000435914 KAT6BQ8WYB5 2073 aa8.68□□□□□ -1.02
PNKDP1-201ENST00000435914 ZBTB7AO95365 584 aa8.67□□□□□ -1.02
PNKDP1-201ENST00000435914 NCAPD2Q15021 1401 aa8.67□□□□□ -1.02
PNKDP1-201ENST00000435914 RRS1Q15050 365 aaKnown RBP8.67□□□□□ -1.02
PNKDP1-201ENST00000435914 ZNF827Q17R98 1081 aa8.67□□□□□ -1.02
PNKDP1-201ENST00000435914 NBPF6Q5VWK0 638 aa8.67□□□□□ -1.02
PNKDP1-201ENST00000435914 LTV1Q96GA3 475 aaPredicted RBP8.67□□□□□ -1.02
PNKDP1-201ENST00000435914 NBPF4Q96M43 638 aa8.67□□□□□ -1.02
PNKDP1-201ENST00000435914 STK32BQ9NY57 414 aa8.67□□□□□ -1.02
PNKDP1-201ENST00000435914 TIMELESSQ9UNS1 1208 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms