RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 CPSF1Q10570 1443 aaKnown RBP19.15■□□□□ 0.66
CDC42EP1-204ENST00000434728 AKAP12Q02952 1782 aa19.14■□□□□ 0.66
CDC42EP1-204ENST00000434728 WDR17Q8IZU2 1322 aa19.14■□□□□ 0.65
CDC42EP1-204ENST00000434728 CDCA7Q9BWT1 371 aaPredicted RBP19.13■□□□□ 0.65
CDC42EP1-204ENST00000434728 SBF2Q86WG5 1849 aa19.13■□□□□ 0.65
CDC42EP1-204ENST00000434728 WNK3Q9BYP7 1800 aa19.13■□□□□ 0.65
CDC42EP1-204ENST00000434728 PEAK1Q9H792 1746 aa19.12■□□□□ 0.65
CDC42EP1-204ENST00000434728 TTC21BQ7Z4L5 1316 aa19.12■□□□□ 0.65
CDC42EP1-204ENST00000434728 TTC21AQ8NDW8 1320 aa19.12■□□□□ 0.65
CDC42EP1-204ENST00000434728 RGPD3A6NKT7 1758 aaPredicted RBP19.11■□□□□ 0.65
CDC42EP1-204ENST00000434728 RGPD4Q7Z3J3 1758 aa19.11■□□□□ 0.65
CDC42EP1-204ENST00000434728 RGPD5Q99666 1765 aa19.11■□□□□ 0.65
CDC42EP1-204ENST00000434728 KTN1Q86UP2 1357 aaKnown RBP19.11■□□□□ 0.65
CDC42EP1-204ENST00000434728 SIN3AQ96ST3 1273 aa19.11■□□□□ 0.65
CDC42EP1-204ENST00000434728 BCL11BQ9C0K0 894 aaPredicted RBP19.11■□□□□ 0.65
CDC42EP1-204ENST00000434728 AXIN2Q9Y2T1 843 aa19.11■□□□□ 0.65
CDC42EP1-204ENST00000434728 COL18A1P39060 1754 aa19.11■□□□□ 0.65
CDC42EP1-204ENST00000434728 KCNQ2O43526 872 aa19.1■□□□□ 0.65
CDC42EP1-204ENST00000434728 PLSCR1O15162 318 aa19.09■□□□□ 0.65
CDC42EP1-204ENST00000434728 ARHGEF25Q86VW2 580 aa19.09■□□□□ 0.65
CDC42EP1-204ENST00000434728 CARD10Q9BWT7 1032 aa19.08■□□□□ 0.64
CDC42EP1-204ENST00000434728 EXOC5O00471 708 aa19.07■□□□□ 0.64
CDC42EP1-204ENST00000434728 YY1P25490 414 aa19.07■□□□□ 0.64
CDC42EP1-204ENST00000434728 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.07■□□□□ 0.64
CDC42EP1-204ENST00000434728 MARCH10Q8NA82 808 aaPredicted RBP19.07■□□□□ 0.64
CDC42EP1-204ENST00000434728 CCDC7Q96M83 1385 aa19.06■□□□□ 0.64
CDC42EP1-204ENST00000434728 NINLQ9Y2I6 1382 aa19.05■□□□□ 0.64
CDC42EP1-204ENST00000434728 TMC1Q8TDI8 760 aa19.04■□□□□ 0.64
CDC42EP1-204ENST00000434728 ANO8Q9HCE9 1232 aaPredicted RBP19.04■□□□□ 0.64
CDC42EP1-204ENST00000434728 NFAT5O94916 1531 aa19.04■□□□□ 0.64
CDC42EP1-204ENST00000434728 MON2Q7Z3U7 1717 aa19.03■□□□□ 0.64
CDC42EP1-204ENST00000434728 PTF1AQ7RTS3 328 aa19.03■□□□□ 0.64
CDC42EP1-204ENST00000434728 STK32BQ9NY57 414 aa19.03■□□□□ 0.64
CDC42EP1-204ENST00000434728 KAT6BQ8WYB5 2073 aa19.02■□□□□ 0.64
CDC42EP1-204ENST00000434728 ABCC6O95255 1503 aa19.02■□□□□ 0.64
CDC42EP1-204ENST00000434728 HDGFL2Q7Z4V5 671 aaPredicted RBP19.02■□□□□ 0.64
CDC42EP1-204ENST00000434728 CARD11Q9BXL7 1154 aa19.02■□□□□ 0.64
CDC42EP1-204ENST00000434728 NLRP2Q9NX02 1062 aa19.02■□□□□ 0.64
CDC42EP1-204ENST00000434728 TNS2Q63HR2 1409 aa19.01■□□□□ 0.63
CDC42EP1-204ENST00000434728 BCL9O00512 1426 aa19■□□□□ 0.63
CDC42EP1-204ENST00000434728 ZBTB7AO95365 584 aa19■□□□□ 0.63
CDC42EP1-204ENST00000434728 LTN1O94822 1766 aa19■□□□□ 0.63
CDC42EP1-204ENST00000434728 TXNRD1Q16881 649 aa18.99■□□□□ 0.63
CDC42EP1-204ENST00000434728 CASZ1Q86V15 1759 aa18.98■□□□□ 0.63
CDC42EP1-204ENST00000434728 SBNO2Q9Y2G9 1366 aa18.98■□□□□ 0.63
CDC42EP1-204ENST00000434728 NME9Q86XW9 330 aa18.98■□□□□ 0.63
CDC42EP1-204ENST00000434728 ACSBG1Q96GR2 724 aa18.98■□□□□ 0.63
CDC42EP1-204ENST00000434728 ERBB3P21860 1342 aa18.98■□□□□ 0.63
CDC42EP1-204ENST00000434728 TERF2IPQ9NYB0 399 aa18.97■□□□□ 0.63
CDC42EP1-204ENST00000434728 IL2RBP14784 551 aa18.96■□□□□ 0.63
CDC42EP1-204ENST00000434728 PROM2Q8N271 834 aa18.96■□□□□ 0.63
CDC42EP1-204ENST00000434728 ATF5Q9Y2D1 282 aaPredicted RBP18.96■□□□□ 0.63
CDC42EP1-204ENST00000434728 NHSQ6T4R5 1651 aa18.95■□□□□ 0.62
CDC42EP1-204ENST00000434728 USP31Q70CQ4 1352 aa18.95■□□□□ 0.62
CDC42EP1-204ENST00000434728 TONSLQ96HA7 1378 aa18.95■□□□□ 0.62
CDC42EP1-204ENST00000434728 SLC15A2Q16348 729 aa18.95■□□□□ 0.62
CDC42EP1-204ENST00000434728 ANKRD24Q8TF21 1146 aa18.95■□□□□ 0.62
CDC42EP1-204ENST00000434728 PDGFDQ9GZP0 370 aaPredicted RBP18.95■□□□□ 0.62
CDC42EP1-204ENST00000434728 EDC4Q6P2E9 1401 aaKnown RBP18.94■□□□□ 0.62
CDC42EP1-204ENST00000434728 MYOM1P52179 1685 aa18.94■□□□□ 0.62
CDC42EP1-204ENST00000434728 USP54Q70EL1 1684 aa18.94■□□□□ 0.62
CDC42EP1-204ENST00000434728 SLC12A5Q9H2X9 1139 aa18.93■□□□□ 0.62
CDC42EP1-204ENST00000434728 CD163L1Q9NR16 1453 aa18.91■□□□□ 0.62
CDC42EP1-204ENST00000434728 MTFR1LQ9H019 292 aa18.91■□□□□ 0.62
CDC42EP1-204ENST00000434728 BTAF1O14981 1849 aa18.9■□□□□ 0.62
CDC42EP1-204ENST00000434728 LTV1Q96GA3 475 aaPredicted RBP18.9■□□□□ 0.62
CDC42EP1-204ENST00000434728 A0A1W2PP64 1363 aa18.9■□□□□ 0.62
CDC42EP1-204ENST00000434728 PTGER2P43116 358 aa18.88■□□□□ 0.61
CDC42EP1-204ENST00000434728 DDX54Q8TDD1 881 aaKnown RBP18.88■□□□□ 0.61
CDC42EP1-204ENST00000434728 FHDC1Q9C0D6 1143 aaPredicted RBP18.87■□□□□ 0.61
CDC42EP1-204ENST00000434728 FAM208AQ9UK61 1670 aaKnown RBP18.87■□□□□ 0.61
CDC42EP1-204ENST00000434728 SYTL4Q96C24 671 aaPredicted RBP18.86■□□□□ 0.61
CDC42EP1-204ENST00000434728 COG3Q96JB2 828 aa18.86■□□□□ 0.61
CDC42EP1-204ENST00000434728 AMPHP49418 695 aa18.85■□□□□ 0.61
CDC42EP1-204ENST00000434728 IP6K1Q92551 441 aa18.85■□□□□ 0.61
CDC42EP1-204ENST00000434728 PUS7Q96PZ0 661 aaKnown RBP18.84■□□□□ 0.61
CDC42EP1-204ENST00000434728 SYT17Q9BSW7 474 aa18.84■□□□□ 0.61
CDC42EP1-204ENST00000434728 SLC24A1O60721 1099 aa18.83■□□□□ 0.6
CDC42EP1-204ENST00000434728 KLHL34Q8N239 644 aa18.83■□□□□ 0.6
CDC42EP1-204ENST00000434728 ARXQ96QS3 562 aa18.83■□□□□ 0.6
CDC42EP1-204ENST00000434728 PAPPAQ13219 1627 aa18.82■□□□□ 0.6
CDC42EP1-204ENST00000434728 SLC27A3Q5K4L6 730 aa18.81■□□□□ 0.6
CDC42EP1-204ENST00000434728 ST20-MTHFSA0A0A6YYL1 179 aa18.8■□□□□ 0.6
CDC42EP1-204ENST00000434728 ZNF827Q17R98 1081 aa18.8■□□□□ 0.6
CDC42EP1-204ENST00000434728 MAP3K19Q56UN5 1328 aa18.79■□□□□ 0.6
CDC42EP1-204ENST00000434728 CHD4Q14839 1912 aa18.79■□□□□ 0.6
CDC42EP1-204ENST00000434728 POLD1P28340 1107 aa18.79■□□□□ 0.6
CDC42EP1-204ENST00000434728 LRRC4BQ9NT99 713 aa18.79■□□□□ 0.6
CDC42EP1-204ENST00000434728 TFCP2L1Q9NZI6 479 aa18.79■□□□□ 0.6
CDC42EP1-204ENST00000434728 DOT1LQ8TEK3 1739 aa18.78■□□□□ 0.6
CDC42EP1-204ENST00000434728 HOXC9P31274 260 aa18.78■□□□□ 0.6
CDC42EP1-204ENST00000434728 SMG6Q86US8 1419 aaKnown RBP18.77■□□□□ 0.6
CDC42EP1-204ENST00000434728 PRIM1P49642 420 aaKnown RBP18.77■□□□□ 0.6
CDC42EP1-204ENST00000434728 GPR162Q16538 588 aa18.77■□□□□ 0.6
CDC42EP1-204ENST00000434728 ZCRB1Q8TBF4 217 aaKnown RBP18.77■□□□□ 0.6
CDC42EP1-204ENST00000434728 SGIP1Q9BQI5 828 aa18.77■□□□□ 0.6
CDC42EP1-204ENST00000434728 UTRNP46939 3433 aa18.77■□□□□ 0.59
CDC42EP1-204ENST00000434728 RGPD2P0DJD1 1756 aa18.76■□□□□ 0.59
CDC42EP1-204ENST00000434728 PELP1Q8IZL8 1130 aaKnown RBP18.76■□□□□ 0.59
CDC42EP1-204ENST00000434728 ZNF784Q8NCA9 323 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms