RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 NINLQ9Y2I6 1382 aa31.09■■■□□ 2.57
SEMA3B-205ENST00000434030 SF3B2Q13435 895 aaKnown RBP31.09■■■□□ 2.57
SEMA3B-205ENST00000434030 THRAP3Q9Y2W1 955 aaKnown RBP31.09■■■□□ 2.57
SEMA3B-205ENST00000434030 CRB1P82279 1406 aa31.08■■■□□ 2.57
SEMA3B-205ENST00000434030 TMF1P82094 1093 aa31.08■■■□□ 2.57
SEMA3B-205ENST00000434030 LTN1O94822 1766 aa31.07■■■□□ 2.56
SEMA3B-205ENST00000434030 RGPD1P0DJD0 1748 aa31.07■■■□□ 2.56
SEMA3B-205ENST00000434030 DEFB132Q7Z7B7 95 aa31.06■■■□□ 2.56
SEMA3B-205ENST00000434030 CCER1Q8TC90 406 aaPredicted RBP31.06■■■□□ 2.56
SEMA3B-205ENST00000434030 PARP4Q9UKK3 1724 aaKnown RBP31.05■■■□□ 2.56
SEMA3B-205ENST00000434030 TOM1L2Q6ZVM7 507 aa31.02■■■□□ 2.56
SEMA3B-205ENST00000434030 WDR17Q8IZU2 1322 aa31.01■■■□□ 2.56
SEMA3B-205ENST00000434030 WNK3Q9BYP7 1800 aa31.01■■■□□ 2.56
SEMA3B-205ENST00000434030 ABCC6O95255 1503 aa31■■■□□ 2.55
SEMA3B-205ENST00000434030 PDE3BQ13370 1112 aa31■■■□□ 2.55
SEMA3B-205ENST00000434030 TNS1Q9HBL0 1735 aaKnown RBP30.99■■■□□ 2.55
SEMA3B-205ENST00000434030 FAM196AQ6ZSG2 479 aa30.99■■■□□ 2.55
SEMA3B-205ENST00000434030 OVOS2A0A0J9YW53 1432 aa30.98■■■□□ 2.55
SEMA3B-205ENST00000434030 OVOS2Q6IE36 1432 aa30.98■■■□□ 2.55
SEMA3B-205ENST00000434030 ANKRD36BQ8N2N9 1353 aa30.98■■■□□ 2.55
SEMA3B-205ENST00000434030 BAG6P46379 1132 aa30.96■■■□□ 2.55
SEMA3B-205ENST00000434030 CDCA8Q53HL2 280 aa30.96■■■□□ 2.55
SEMA3B-205ENST00000434030 CSB-PGBD3P0DP91 1061 aa30.94■■■□□ 2.54
SEMA3B-205ENST00000434030 CARD10Q9BWT7 1032 aa30.93■■■□□ 2.54
SEMA3B-205ENST00000434030 LRRC37A3O60309 1634 aa30.93■■■□□ 2.54
SEMA3B-205ENST00000434030 MYOM1P52179 1685 aa30.91■■■□□ 2.54
SEMA3B-205ENST00000434030 TRIM37O94972 964 aa30.91■■■□□ 2.54
SEMA3B-205ENST00000434030 EN1Q05925 392 aaPredicted RBP30.89■■■□□ 2.54
SEMA3B-205ENST00000434030 COG3Q96JB2 828 aa30.89■■■□□ 2.54
SEMA3B-205ENST00000434030 SBF2Q86WG5 1849 aa30.89■■■□□ 2.53
SEMA3B-205ENST00000434030 PEAK1Q9H792 1746 aa30.88■■■□□ 2.53
SEMA3B-205ENST00000434030 DDB1Q16531 1140 aa30.88■■■□□ 2.53
SEMA3B-205ENST00000434030 CDCA7Q9BWT1 371 aaPredicted RBP30.87■■■□□ 2.53
SEMA3B-205ENST00000434030 ERBB3P21860 1342 aa30.87■■■□□ 2.53
SEMA3B-205ENST00000434030 DISP2A7MBM2 1401 aa30.87■■■□□ 2.53
SEMA3B-205ENST00000434030 KIF20BQ96Q89 1820 aa30.87■■■□□ 2.53
SEMA3B-205ENST00000434030 CCDC7Q96M83 1385 aa30.85■■■□□ 2.53
SEMA3B-205ENST00000434030 FYB1O15117 783 aa30.85■■■□□ 2.53
SEMA3B-205ENST00000434030 FBLN1P23142 703 aa30.82■■■□□ 2.52
SEMA3B-205ENST00000434030 ANKRD24Q8TF21 1146 aa30.82■■■□□ 2.52
SEMA3B-205ENST00000434030 IP6K1Q92551 441 aa30.82■■■□□ 2.52
SEMA3B-205ENST00000434030 C11orf95C9JLR9 678 aaPredicted RBP30.81■■■□□ 2.52
SEMA3B-205ENST00000434030 APBA3O96018 575 aa30.81■■■□□ 2.52
SEMA3B-205ENST00000434030 GGNBP2Q9H3C7 697 aa30.81■■■□□ 2.52
SEMA3B-205ENST00000434030 NLRP2Q9NX02 1062 aa30.81■■■□□ 2.52
SEMA3B-205ENST00000434030 OVOS2A0A0G2JMS6 1433 aa30.81■■■□□ 2.52
SEMA3B-205ENST00000434030 EIF4G2P78344 907 aaKnown RBP eCLIP30.8■■■□□ 2.52
SEMA3B-205ENST00000434030 EZH2Q15910 746 aaKnown RBP30.8■■■□□ 2.52
SEMA3B-205ENST00000434030 CAMKK2Q96RR4 588 aa30.79■■■□□ 2.52
SEMA3B-205ENST00000434030 MAP3K19Q56UN5 1328 aa30.78■■■□□ 2.52
SEMA3B-205ENST00000434030 FAM208AQ9UK61 1670 aaKnown RBP30.78■■■□□ 2.52
SEMA3B-205ENST00000434030 CARD14Q9BXL6 1004 aa30.78■■■□□ 2.52
SEMA3B-205ENST00000434030 EXOC5O00471 708 aa30.77■■■□□ 2.52
SEMA3B-205ENST00000434030 HSPA5P11021 654 aaKnown RBP30.77■■■□□ 2.52
SEMA3B-205ENST00000434030 MARCH10Q8NA82 808 aaPredicted RBP30.77■■■□□ 2.52
SEMA3B-205ENST00000434030 RGPD2P0DJD1 1756 aa30.77■■■□□ 2.52
SEMA3B-205ENST00000434030 HOXC9P31274 260 aa30.74■■■□□ 2.51
SEMA3B-205ENST00000434030 AMPHP49418 695 aa30.74■■■□□ 2.51
SEMA3B-205ENST00000434030 RREB1Q92766 1687 aa30.74■■■□□ 2.51
SEMA3B-205ENST00000434030 LTV1Q96GA3 475 aaPredicted RBP30.73■■■□□ 2.51
SEMA3B-205ENST00000434030 NSD3Q9BZ95 1437 aa30.73■■■□□ 2.51
SEMA3B-205ENST00000434030 PARD3Q8TEW0 1356 aa30.72■■■□□ 2.51
SEMA3B-205ENST00000434030 RRS1Q15050 365 aaKnown RBP30.72■■■□□ 2.51
SEMA3B-205ENST00000434030 POLR3GLQ9BT43 218 aa30.72■■■□□ 2.51
SEMA3B-205ENST00000434030 IL2RBP14784 551 aa30.71■■■□□ 2.51
SEMA3B-205ENST00000434030 BCL9O00512 1426 aa30.71■■■□□ 2.51
SEMA3B-205ENST00000434030 TNS2Q63HR2 1409 aa30.71■■■□□ 2.51
SEMA3B-205ENST00000434030 KAT6BQ8WYB5 2073 aa30.69■■■□□ 2.5
SEMA3B-205ENST00000434030 NUP188Q5SRE5 1749 aa30.69■■■□□ 2.5
SEMA3B-205ENST00000434030 PSDA5PKW4 1024 aaPredicted RBP30.68■■■□□ 2.5
SEMA3B-205ENST00000434030 RTL1A6NKG5 1358 aa30.67■■■□□ 2.5
SEMA3B-205ENST00000434030 MAP2P11137 1827 aaKnown RBP30.66■■■□□ 2.5
SEMA3B-205ENST00000434030 PTF1AQ7RTS3 328 aa30.66■■■□□ 2.5
SEMA3B-205ENST00000434030 BCL11BQ9C0K0 894 aaPredicted RBP30.66■■■□□ 2.5
SEMA3B-205ENST00000434030 RGPD3A6NKT7 1758 aaPredicted RBP30.66■■■□□ 2.5
SEMA3B-205ENST00000434030 RGPD4Q7Z3J3 1758 aa30.66■■■□□ 2.5
SEMA3B-205ENST00000434030 SRCAPQ6ZRS2 3230 aa30.62■■■□□ 2.49
SEMA3B-205ENST00000434030 PLSCR1O15162 318 aa30.62■■■□□ 2.49
SEMA3B-205ENST00000434030 R3HDM1Q15032 1099 aaKnown RBP30.61■■■□□ 2.49
SEMA3B-205ENST00000434030 CGNL1Q0VF96 1302 aa30.6■■■□□ 2.49
SEMA3B-205ENST00000434030 ANKRD26Q9UPS8 1709 aa30.6■■■□□ 2.49
SEMA3B-205ENST00000434030 NHSQ6T4R5 1651 aa30.58■■■□□ 2.49
SEMA3B-205ENST00000434030 KIF24Q5T7B8 1368 aa30.58■■■□□ 2.49
SEMA3B-205ENST00000434030 HSP90AB2PQ58FF8 381 aa30.58■■■□□ 2.49
SEMA3B-205ENST00000434030 INSRP06213 1382 aa30.57■■■□□ 2.48
SEMA3B-205ENST00000434030 FLT4P35916 1363 aa30.57■■■□□ 2.48
SEMA3B-205ENST00000434030 NBPF6Q5VWK0 638 aa30.56■■■□□ 2.48
SEMA3B-205ENST00000434030 NBPF4Q96M43 638 aa30.56■■■□□ 2.48
SEMA3B-205ENST00000434030 PANK3Q9H999 370 aa30.56■■■□□ 2.48
SEMA3B-205ENST00000434030 SHANK3Q9BYB0 1731 aa30.56■■■□□ 2.48
SEMA3B-205ENST00000434030 LRP5O75197 1615 aa30.55■■■□□ 2.48
SEMA3B-205ENST00000434030 KCNQ2O43526 872 aa30.55■■■□□ 2.48
SEMA3B-205ENST00000434030 EMILIN1Q9Y6C2 1016 aa30.55■■■□□ 2.48
SEMA3B-205ENST00000434030 SMG6Q86US8 1419 aaKnown RBP30.55■■■□□ 2.48
SEMA3B-205ENST00000434030 NBPF14Q5TI25 921 aa30.54■■■□□ 2.48
SEMA3B-205ENST00000434030 ACSBG1Q96GR2 724 aa30.54■■■□□ 2.48
SEMA3B-205ENST00000434030 BTAF1O14981 1849 aa30.52■■■□□ 2.48
SEMA3B-205ENST00000434030 DDX54Q8TDD1 881 aaKnown RBP30.52■■■□□ 2.48
SEMA3B-205ENST00000434030 PROM2Q8N271 834 aa30.51■■■□□ 2.47
SEMA3B-205ENST00000434030 MEGF6O75095 1541 aa30.51■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms