RNA–Protein interactions for RNA: ENST00000433661.1

PTP4A1P3-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 3, humanhuman

BASIC

Gene PTP4A1P3, Length 420 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P3-201ENST00000433661 C4orf48Q5BLP8 95 aa9.52□□□□□ -0.89
PTP4A1P3-201ENST00000433661 RNF135Q8IUD6 432 aa9.52□□□□□ -0.89
PTP4A1P3-201ENST00000433661 SPNS2Q8IVW8 549 aa9.52□□□□□ -0.89
PTP4A1P3-201ENST00000433661 ZBTB7CA1YPR0 619 aa9.51□□□□□ -0.89
PTP4A1P3-201ENST00000433661 RNF223E7ERA6 249 aa9.51□□□□□ -0.89
PTP4A1P3-201ENST00000433661 ATP5J2-PTCD1G3V325 749 aa9.51□□□□□ -0.89
PTP4A1P3-201ENST00000433661 BRD1O95696 1058 aa9.51□□□□□ -0.89
PTP4A1P3-201ENST00000433661 RPIAP49247 311 aa9.51□□□□□ -0.89
PTP4A1P3-201ENST00000433661 RNF20Q5VTR2 975 aa9.51□□□□□ -0.89
PTP4A1P3-201ENST00000433661 PLPP7Q8NBV4 271 aa9.51□□□□□ -0.89
PTP4A1P3-201ENST00000433661 MAP4K5Q9Y4K4 846 aa9.51□□□□□ -0.89
PTP4A1P3-201ENST00000433661 SH3BP2P78314 561 aa9.5□□□□□ -0.89
PTP4A1P3-201ENST00000433661 NBPF20Q3BBV1 942 aa9.5□□□□□ -0.89
PTP4A1P3-201ENST00000433661 DZIP3Q86Y13 1208 aaKnown RBP9.5□□□□□ -0.89
PTP4A1P3-201ENST00000433661 FOXJ1Q92949 421 aa9.5□□□□□ -0.89
PTP4A1P3-201ENST00000433661 MPNDQ8N594 471 aa9.49□□□□□ -0.89
PTP4A1P3-201ENST00000433661 VARSP26640 1264 aaKnown RBP9.48□□□□□ -0.89
PTP4A1P3-201ENST00000433661 TRIM32Q13049 653 aa9.48□□□□□ -0.89
PTP4A1P3-201ENST00000433661 PODXL2Q9NZ53 605 aa9.48□□□□□ -0.89
PTP4A1P3-201ENST00000433661 KCNA1Q09470 495 aa9.47□□□□□ -0.89
PTP4A1P3-201ENST00000433661 NCOA4Q13772 614 aa9.47□□□□□ -0.89
PTP4A1P3-201ENST00000433661 SLC10A4Q96EP9 437 aa9.47□□□□□ -0.89
PTP4A1P3-201ENST00000433661 ZMIZ1Q9ULJ6 1067 aa9.47□□□□□ -0.89
PTP4A1P3-201ENST00000433661 ZBTB24O43167 697 aaPredicted RBP9.46□□□□□ -0.9
PTP4A1P3-201ENST00000433661 PTK7Q13308 1070 aa9.46□□□□□ -0.9
PTP4A1P3-201ENST00000433661 EML3Q32P44 896 aa9.46□□□□□ -0.9
PTP4A1P3-201ENST00000433661 TRIM50Q86XT4 487 aa9.46□□□□□ -0.9
PTP4A1P3-201ENST00000433661 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.46□□□□□ -0.9
PTP4A1P3-201ENST00000433661 MKRN1Q9UHC7 482 aaKnown RBP9.46□□□□□ -0.9
PTP4A1P3-201ENST00000433661 MAGEB6P1A0A0J9YX57 407 aa9.45□□□□□ -0.9
PTP4A1P3-201ENST00000433661 USP17L15C9J2P7 530 aa9.45□□□□□ -0.9
PTP4A1P3-201ENST00000433661 USP17L10C9JJH3 530 aa9.45□□□□□ -0.9
PTP4A1P3-201ENST00000433661 USP17L13C9JLJ4 530 aa9.45□□□□□ -0.9
PTP4A1P3-201ENST00000433661 USP17L12C9JPN9 530 aa9.45□□□□□ -0.9
PTP4A1P3-201ENST00000433661 USP17L11C9JVI0 530 aa9.45□□□□□ -0.9
PTP4A1P3-201ENST00000433661 USP17L21D6R901 530 aa9.45□□□□□ -0.9
PTP4A1P3-201ENST00000433661 USP17L18D6R9N7 530 aa9.45□□□□□ -0.9
PTP4A1P3-201ENST00000433661 USP17L22D6RA61 530 aa9.45□□□□□ -0.9
PTP4A1P3-201ENST00000433661 USP17L17D6RBQ6 530 aa9.45□□□□□ -0.9
PTP4A1P3-201ENST00000433661 USP17L19D6RCP7 530 aa9.45□□□□□ -0.9
PTP4A1P3-201ENST00000433661 USP17L20D6RJB6 530 aa9.45□□□□□ -0.9
PTP4A1P3-201ENST00000433661 USP17L24Q0WX57 530 aa9.45□□□□□ -0.9
PTP4A1P3-201ENST00000433661 LINC01559Q495D7 138 aa9.45□□□□□ -0.9
PTP4A1P3-201ENST00000433661 PLA2G2CQ5R387 149 aa9.45□□□□□ -0.9
PTP4A1P3-201ENST00000433661 CCDC85AQ96PX6 553 aaPredicted RBP9.45□□□□□ -0.9
PTP4A1P3-201ENST00000433661 GIGYF1O75420 1035 aaPredicted RBP9.44□□□□□ -0.9
PTP4A1P3-201ENST00000433661 ATP1A2P50993 1020 aa9.44□□□□□ -0.9
PTP4A1P3-201ENST00000433661 SIX5Q8N196 739 aa9.44□□□□□ -0.9
PTP4A1P3-201ENST00000433661 CDK15Q96Q40 435 aa9.44□□□□□ -0.9
PTP4A1P3-201ENST00000433661 CARD14Q9BXL6 1004 aa9.44□□□□□ -0.9
PTP4A1P3-201ENST00000433661 PPEF1O14829 653 aaPredicted RBP9.43□□□□□ -0.9
PTP4A1P3-201ENST00000433661 SKOR1P84550 965 aa9.43□□□□□ -0.9
PTP4A1P3-201ENST00000433661 AGERQ15109 404 aa9.43□□□□□ -0.9
PTP4A1P3-201ENST00000433661 B4GALNT3Q6L9W6 998 aa9.43□□□□□ -0.9
PTP4A1P3-201ENST00000433661 PPP1R18Q6NYC8 613 aa9.43□□□□□ -0.9
PTP4A1P3-201ENST00000433661 LARGE2Q8N3Y3 721 aa9.43□□□□□ -0.9
PTP4A1P3-201ENST00000433661 SIRT1Q96EB6 747 aa9.43□□□□□ -0.9
PTP4A1P3-201ENST00000433661 CDCA7Q9BWT1 371 aaPredicted RBP9.43□□□□□ -0.9
PTP4A1P3-201ENST00000433661 NOVA2Q9UNW9 492 aaKnown RBP9.43□□□□□ -0.9
PTP4A1P3-201ENST00000433661 DOLKQ9UPQ8 538 aa9.43□□□□□ -0.9
PTP4A1P3-201ENST00000433661 NOD1Q9Y239 953 aa9.43□□□□□ -0.9
PTP4A1P3-201ENST00000433661 DKK1O94907 266 aa9.42□□□□□ -0.9
PTP4A1P3-201ENST00000433661 CRTC2Q53ET0 693 aaPredicted RBP9.42□□□□□ -0.9
PTP4A1P3-201ENST00000433661 LARP1Q6PKG0 1096 aaKnown RBP9.42□□□□□ -0.9
PTP4A1P3-201ENST00000433661 TRIM52Q96A61 297 aa9.42□□□□□ -0.9
PTP4A1P3-201ENST00000433661 FAM69CQ0P6D2 419 aa9.41□□□□□ -0.9
PTP4A1P3-201ENST00000433661 SWI5Q1ZZU3 235 aa9.41□□□□□ -0.9
PTP4A1P3-201ENST00000433661 TMEM164Q5U3C3 297 aa9.41□□□□□ -0.9
PTP4A1P3-201ENST00000433661 DEPDC4Q8N2C3 294 aa9.41□□□□□ -0.9
PTP4A1P3-201ENST00000433661 CLP1Q92989 425 aaKnown RBP9.41□□□□□ -0.9
PTP4A1P3-201ENST00000433661 CD2BP2O95400 341 aaKnown RBP9.4□□□□□ -0.9
PTP4A1P3-201ENST00000433661 RASA1P20936 1047 aa9.4□□□□□ -0.9
PTP4A1P3-201ENST00000433661 CLDN10P78369 228 aa9.4□□□□□ -0.9
PTP4A1P3-201ENST00000433661 TSGA10IPQ3SY00 556 aa9.4□□□□□ -0.9
PTP4A1P3-201ENST00000433661 CDCA8Q53HL2 280 aa9.4□□□□□ -0.9
PTP4A1P3-201ENST00000433661 ANKMY2Q8IV38 441 aa9.4□□□□□ -0.9
PTP4A1P3-201ENST00000433661 GNEQ9Y223 722 aaKnown RBP9.4□□□□□ -0.9
PTP4A1P3-201ENST00000433661 USP4Q13107 963 aa9.39□□□□□ -0.91
PTP4A1P3-201ENST00000433661 OGFOD1Q8N543 542 aa9.39□□□□□ -0.91
PTP4A1P3-201ENST00000433661 STK32AQ8WU08 396 aa9.39□□□□□ -0.91
PTP4A1P3-201ENST00000433661 KCTD15Q96SI1 283 aaPredicted RBP9.39□□□□□ -0.91
PTP4A1P3-201ENST00000433661 ZBTB7BO15156 539 aaPredicted RBP9.38□□□□□ -0.91
PTP4A1P3-201ENST00000433661 DNAAF2Q9NVR5 837 aaKnown RBP9.38□□□□□ -0.91
PTP4A1P3-201ENST00000433661 PCDHGA11Q9Y5H2 935 aa9.38□□□□□ -0.91
PTP4A1P3-201ENST00000433661 M0R2N6 131 aa9.37□□□□□ -0.91
PTP4A1P3-201ENST00000433661 SIAH2O43255 324 aa9.37□□□□□ -0.91
PTP4A1P3-201ENST00000433661 FAM200AQ8TCP9 573 aa9.37□□□□□ -0.91
PTP4A1P3-201ENST00000433661 EMID1Q96A84 441 aaPredicted RBP9.37□□□□□ -0.91
PTP4A1P3-201ENST00000433661 INTS6LQ5JSJ4 861 aaKnown RBP9.36□□□□□ -0.91
PTP4A1P3-201ENST00000433661 AEBP1Q8IUX7 1158 aa9.36□□□□□ -0.91
PTP4A1P3-201ENST00000433661 C1orf216Q8TAB5 229 aa9.36□□□□□ -0.91
PTP4A1P3-201ENST00000433661 WNT7AO00755 349 aa9.35□□□□□ -0.91
PTP4A1P3-201ENST00000433661 ERVK-9P63128 1117 aa9.35□□□□□ -0.91
PTP4A1P3-201ENST00000433661 GTF2IP78347 998 aa9.35□□□□□ -0.91
PTP4A1P3-201ENST00000433661 MMRN1Q13201 1228 aa9.35□□□□□ -0.91
PTP4A1P3-201ENST00000433661 RC3H1Q5TC82 1133 aaKnown RBP9.35□□□□□ -0.91
PTP4A1P3-201ENST00000433661 LIAT1Q6ZQX7 453 aa9.35□□□□□ -0.91
PTP4A1P3-201ENST00000433661 WASLO00401 505 aaPredicted RBP9.34□□□□□ -0.91
PTP4A1P3-201ENST00000433661 SSFA2P28290 1259 aa9.34□□□□□ -0.91
PTP4A1P3-201ENST00000433661 GRM5P41594 1212 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms