RNA–Protein interactions for RNA: ENST00000432641.2

SDHAF3-202, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHAF3, Length 2,060 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-202ENST00000432641 KIF16BQ96L93 1317 aa26.14■■□□□ 1.78
SDHAF3-202ENST00000432641 IFT57Q9NWB7 429 aa26.13■■□□□ 1.77
SDHAF3-202ENST00000432641 GNAI1P63096 354 aa26.13■■□□□ 1.77
SDHAF3-202ENST00000432641 ANKLE2Q86XL3 938 aa26.13■■□□□ 1.77
SDHAF3-202ENST00000432641 DZIP1LQ8IYY4 767 aaKnown RBP26.13■■□□□ 1.77
SDHAF3-202ENST00000432641 PHACTR3Q96KR7 559 aa26.13■■□□□ 1.77
SDHAF3-202ENST00000432641 SETD1BQ9UPS6 1966 aaKnown RBP26.13■■□□□ 1.77
SDHAF3-202ENST00000432641 MVPQ14764 893 aaKnown RBP26.12■■□□□ 1.77
SDHAF3-202ENST00000432641 FTSJ3Q8IY81 847 aaKnown RBP26.12■■□□□ 1.77
SDHAF3-202ENST00000432641 BCL2L13Q9BXK5 485 aa26.12■■□□□ 1.77
SDHAF3-202ENST00000432641 CHD2O14647 1828 aaKnown RBP26.12■■□□□ 1.77
SDHAF3-202ENST00000432641 IPO8O15397 1037 aaKnown RBP26.11■■□□□ 1.77
SDHAF3-202ENST00000432641 BRPF1P55201 1214 aaPredicted RBP26.11■■□□□ 1.77
SDHAF3-202ENST00000432641 DLG5Q8TDM6 1919 aa26.11■■□□□ 1.77
SDHAF3-202ENST00000432641 RGPD8O14715 1765 aaPredicted RBP26.11■■□□□ 1.77
SDHAF3-202ENST00000432641 NGDNQ8NEJ9 315 aaKnown RBP26.1■■□□□ 1.77
SDHAF3-202ENST00000432641 IPO9Q96P70 1041 aaKnown RBP26.1■■□□□ 1.77
SDHAF3-202ENST00000432641 USP54Q70EL1 1684 aa26.1■■□□□ 1.77
SDHAF3-202ENST00000432641 RGPD1P0DJD0 1748 aa26.1■■□□□ 1.77
SDHAF3-202ENST00000432641 NUTM2FA1L443 756 aa26.1■■□□□ 1.77
SDHAF3-202ENST00000432641 RLBP1P12271 317 aa26.1■■□□□ 1.77
SDHAF3-202ENST00000432641 SSH1Q8WYL5 1049 aa26.1■■□□□ 1.77
SDHAF3-202ENST00000432641 KCNA6P17658 529 aa26.08■■□□□ 1.77
SDHAF3-202ENST00000432641 PEAK1Q9H792 1746 aa26.08■■□□□ 1.77
SDHAF3-202ENST00000432641 EIF4A2Q14240 407 aaKnown RBP26.08■■□□□ 1.77
SDHAF3-202ENST00000432641 ATF7IPQ6VMQ6 1270 aa26.08■■□□□ 1.77
SDHAF3-202ENST00000432641 IGHDP01880 384 aa26.07■■□□□ 1.76
SDHAF3-202ENST00000432641 ZNF853P0CG23 659 aa26.07■■□□□ 1.76
SDHAF3-202ENST00000432641 DDX19BQ9UMR2 479 aa26.06■■□□□ 1.76
SDHAF3-202ENST00000432641 SBNO1A3KN83 1393 aa26.06■■□□□ 1.76
SDHAF3-202ENST00000432641 KIF24Q5T7B8 1368 aa26.06■■□□□ 1.76
SDHAF3-202ENST00000432641 FAM161AQ3B820 660 aa26.05■■□□□ 1.76
SDHAF3-202ENST00000432641 RWDD1Q9H446 243 aaPredicted RBP26.05■■□□□ 1.76
SDHAF3-202ENST00000432641 PIK3C2AO00443 1686 aa26.05■■□□□ 1.76
SDHAF3-202ENST00000432641 ARHGEF10O15013 1369 aa26.05■■□□□ 1.76
SDHAF3-202ENST00000432641 FLT4P35916 1363 aa26.04■■□□□ 1.76
SDHAF3-202ENST00000432641 NOP58Q9Y2X3 529 aaKnown RBP26.04■■□□□ 1.76
SDHAF3-202ENST00000432641 TRIM27P14373 513 aa26.03■■□□□ 1.76
SDHAF3-202ENST00000432641 CFAP44Q96MT7 982 aa26.03■■□□□ 1.76
SDHAF3-202ENST00000432641 NOB1Q9ULX3 412 aaKnown RBP26.01■■□□□ 1.75
SDHAF3-202ENST00000432641 TNNQ9UQP3 1299 aa26.01■■□□□ 1.75
SDHAF3-202ENST00000432641 SULT6B1Q6IMI4 303 aa26■■□□□ 1.75
SDHAF3-202ENST00000432641 HAP1P54257 671 aaPredicted RBP26■■□□□ 1.75
SDHAF3-202ENST00000432641 ARHGAP45Q92619 1136 aa26■■□□□ 1.75
SDHAF3-202ENST00000432641 CHMP4BQ9H444 224 aaKnown RBP26■■□□□ 1.75
SDHAF3-202ENST00000432641 LAS1LQ9Y4W2 734 aaKnown RBP26■■□□□ 1.75
SDHAF3-202ENST00000432641 MAP3K19Q56UN5 1328 aa25.99■■□□□ 1.75
SDHAF3-202ENST00000432641 SKAP1Q86WV1 359 aa25.99■■□□□ 1.75
SDHAF3-202ENST00000432641 PCDHB15Q9Y5E8 787 aa25.99■■□□□ 1.75
SDHAF3-202ENST00000432641 VIRMAQ69YN4 1812 aaKnown RBP25.98■■□□□ 1.75
SDHAF3-202ENST00000432641 VAMP4O75379 141 aa25.97■■□□□ 1.75
SDHAF3-202ENST00000432641 HSP90AB2PQ58FF8 381 aa25.97■■□□□ 1.75
SDHAF3-202ENST00000432641 MBIPQ9NS73 344 aa25.97■■□□□ 1.75
SDHAF3-202ENST00000432641 RGS3P49796 1198 aa25.97■■□□□ 1.75
SDHAF3-202ENST00000432641 ZBTB47Q9UFB7 747 aaPredicted RBP25.97■■□□□ 1.75
SDHAF3-202ENST00000432641 ADGRL3Q9HAR2 1447 aa25.95■■□□□ 1.74
SDHAF3-202ENST00000432641 ITPRIPQ8IWB1 547 aa25.95■■□□□ 1.74
SDHAF3-202ENST00000432641 KDRP35968 1356 aa25.95■■□□□ 1.74
SDHAF3-202ENST00000432641 HDAC1Q13547 482 aaPredicted RBP25.94■■□□□ 1.74
SDHAF3-202ENST00000432641 C8orf34Q49A92 452 aa25.94■■□□□ 1.74
SDHAF3-202ENST00000432641 DDRGK1Q96HY6 314 aa25.94■■□□□ 1.74
SDHAF3-202ENST00000432641 THUMPD2Q9BTF0 503 aaKnown RBP25.94■■□□□ 1.74
SDHAF3-202ENST00000432641 MARF1Q9Y4F3 1742 aaKnown RBP25.94■■□□□ 1.74
SDHAF3-202ENST00000432641 NPHP4O75161 1426 aaPredicted RBP25.94■■□□□ 1.74
SDHAF3-202ENST00000432641 AEBP1Q8IUX7 1158 aa25.93■■□□□ 1.74
SDHAF3-202ENST00000432641 AMPHP49418 695 aa25.92■■□□□ 1.74
SDHAF3-202ENST00000432641 NLRP6P59044 892 aa25.92■■□□□ 1.74
SDHAF3-202ENST00000432641 TWISTNBQ3B726 338 aaPredicted RBP25.92■■□□□ 1.74
SDHAF3-202ENST00000432641 MRPL50Q8N5N7 158 aaKnown RBP25.92■■□□□ 1.74
SDHAF3-202ENST00000432641 NPM2Q86SE8 214 aaKnown RBP25.91■■□□□ 1.74
SDHAF3-202ENST00000432641 TMEM57Q8N5G2 664 aa25.91■■□□□ 1.74
SDHAF3-202ENST00000432641 PHF8Q9UPP1 1060 aa25.91■■□□□ 1.74
SDHAF3-202ENST00000432641 IGSF1Q8N6C5 1336 aa25.9■■□□□ 1.74
SDHAF3-202ENST00000432641 RTL1A6NKG5 1358 aa25.9■■□□□ 1.74
SDHAF3-202ENST00000432641 ZBTB40Q9NUA8 1239 aa25.89■■□□□ 1.73
SDHAF3-202ENST00000432641 NWD1Q149M9 1564 aa25.89■■□□□ 1.73
SDHAF3-202ENST00000432641 KIAA0232Q92628 1395 aa25.88■■□□□ 1.73
SDHAF3-202ENST00000432641 FAM83GA6ND36 823 aa25.86■■□□□ 1.73
SDHAF3-202ENST00000432641 CHL1O00533 1208 aa25.86■■□□□ 1.73
SDHAF3-202ENST00000432641 SOX12O15370 315 aa25.86■■□□□ 1.73
SDHAF3-202ENST00000432641 DEKP35659 375 aaKnown RBP25.86■■□□□ 1.73
SDHAF3-202ENST00000432641 ABTB2Q8N961 1025 aa25.86■■□□□ 1.73
SDHAF3-202ENST00000432641 GAS2L2Q8NHY3 880 aa25.86■■□□□ 1.73
SDHAF3-202ENST00000432641 TSPYL6Q8N831 410 aa25.86■■□□□ 1.73
SDHAF3-202ENST00000432641 API5Q9BZZ5 524 aaKnown RBP25.86■■□□□ 1.73
SDHAF3-202ENST00000432641 PDZRN3Q9UPQ7 1066 aa25.85■■□□□ 1.73
SDHAF3-202ENST00000432641 HTATSF1O43719 755 aaKnown RBP25.84■■□□□ 1.73
SDHAF3-202ENST00000432641 ABCC4O15439 1325 aa25.83■■□□□ 1.73
SDHAF3-202ENST00000432641 C8orf58Q8NAV2 365 aa25.83■■□□□ 1.73
SDHAF3-202ENST00000432641 HOXC9P31274 260 aa25.83■■□□□ 1.72
SDHAF3-202ENST00000432641 RTF1Q92541 710 aaKnown RBP25.83■■□□□ 1.72
SDHAF3-202ENST00000432641 DCTN1Q14203 1278 aa25.82■■□□□ 1.72
SDHAF3-202ENST00000432641 EYA1Q99502 592 aa25.82■■□□□ 1.72
SDHAF3-202ENST00000432641 CRB1P82279 1406 aa25.82■■□□□ 1.72
SDHAF3-202ENST00000432641 SMC5Q8IY18 1101 aa25.81■■□□□ 1.72
SDHAF3-202ENST00000432641 PAK3O75914 559 aaPredicted RBP25.8■■□□□ 1.72
SDHAF3-202ENST00000432641 PHRF1Q9P1Y6 1649 aaKnown RBP25.79■■□□□ 1.72
SDHAF3-202ENST00000432641 LTN1O94822 1766 aa25.78■■□□□ 1.72
SDHAF3-202ENST00000432641 MTHFSDQ2M296 383 aaKnown RBP25.78■■□□□ 1.72
SDHAF3-202ENST00000432641 MCM10Q7L590 875 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms