RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 UNC5CLQ8IV45 518 aa24.37■■□□□ 1.49
HMGN1-206ENST00000431390 COL3A1P02461 1466 aaPredicted RBP24.37■■□□□ 1.49
HMGN1-206ENST00000431390 PLCH1Q4KWH8 1693 aa24.36■■□□□ 1.49
HMGN1-206ENST00000431390 ALS2Q96Q42 1657 aa24.36■■□□□ 1.49
HMGN1-206ENST00000431390 ABCA3Q99758 1704 aa24.36■■□□□ 1.49
HMGN1-206ENST00000431390 SBNO1A3KN83 1393 aa24.35■■□□□ 1.49
HMGN1-206ENST00000431390 BLMP54132 1417 aaPredicted RBP24.34■■□□□ 1.49
HMGN1-206ENST00000431390 CENPBP07199 599 aaPredicted RBP24.33■■□□□ 1.49
HMGN1-206ENST00000431390 HNRNPUQ00839 825 aaKnown RBP eCLIP24.33■■□□□ 1.48
HMGN1-206ENST00000431390 NWD2Q9ULI1 1742 aa24.32■■□□□ 1.48
HMGN1-206ENST00000431390 TNS3Q68CZ2 1445 aa24.32■■□□□ 1.48
HMGN1-206ENST00000431390 FBLN1P23142 703 aa24.31■■□□□ 1.48
HMGN1-206ENST00000431390 ADAMTS8Q9UP79 889 aa24.31■■□□□ 1.48
HMGN1-206ENST00000431390 EMILIN1Q9Y6C2 1016 aa24.31■■□□□ 1.48
HMGN1-206ENST00000431390 PLEKHG5O94827 1062 aa24.29■■□□□ 1.48
HMGN1-206ENST00000431390 SLIT3O75094 1523 aa24.29■■□□□ 1.48
HMGN1-206ENST00000431390 HAP1P54257 671 aaPredicted RBP24.29■■□□□ 1.48
HMGN1-206ENST00000431390 RRS1Q15050 365 aaKnown RBP24.29■■□□□ 1.48
HMGN1-206ENST00000431390 NUTM2GQ5VZR2 741 aa24.29■■□□□ 1.48
HMGN1-206ENST00000431390 CABLES1Q8TDN4 633 aa24.29■■□□□ 1.48
HMGN1-206ENST00000431390 NUDCQ9Y266 331 aa24.28■■□□□ 1.48
HMGN1-206ENST00000431390 PEAK1Q9H792 1746 aa24.27■■□□□ 1.48
HMGN1-206ENST00000431390 NFAT5O94916 1531 aa24.27■■□□□ 1.48
HMGN1-206ENST00000431390 KIF24Q5T7B8 1368 aa24.27■■□□□ 1.48
HMGN1-206ENST00000431390 USP19O94966 1318 aa24.27■■□□□ 1.47
HMGN1-206ENST00000431390 PPM1GO15355 546 aaPredicted RBP24.26■■□□□ 1.47
HMGN1-206ENST00000431390 DIAPH1O60610 1272 aaKnown RBP24.26■■□□□ 1.47
HMGN1-206ENST00000431390 DEFB132Q7Z7B7 95 aa24.26■■□□□ 1.47
HMGN1-206ENST00000431390 KCNH5Q8NCM2 988 aa24.26■■□□□ 1.47
HMGN1-206ENST00000431390 SEPT12Q8IYM1 358 aa24.25■■□□□ 1.47
HMGN1-206ENST00000431390 LTN1O94822 1766 aa24.24■■□□□ 1.47
HMGN1-206ENST00000431390 MAP3K19Q56UN5 1328 aa24.24■■□□□ 1.47
HMGN1-206ENST00000431390 ZBED9Q6R2W3 1325 aa24.24■■□□□ 1.47
HMGN1-206ENST00000431390 ARHGEF10O15013 1369 aa24.24■■□□□ 1.47
HMGN1-206ENST00000431390 PHRF1Q9P1Y6 1649 aaKnown RBP24.24■■□□□ 1.47
HMGN1-206ENST00000431390 VPS72Q15906 364 aa24.24■■□□□ 1.47
HMGN1-206ENST00000431390 SOX12O15370 315 aa24.23■■□□□ 1.47
HMGN1-206ENST00000431390 LMOD2Q6P5Q4 547 aa24.23■■□□□ 1.47
HMGN1-206ENST00000431390 NRAPQ86VF7 1730 aa24.23■■□□□ 1.47
HMGN1-206ENST00000431390 FLT4P35916 1363 aa24.22■■□□□ 1.47
HMGN1-206ENST00000431390 CCDC9Q9Y3X0 531 aaKnown RBP24.22■■□□□ 1.47
HMGN1-206ENST00000431390 RTL1A6NKG5 1358 aa24.21■■□□□ 1.47
HMGN1-206ENST00000431390 SF3B2Q13435 895 aaKnown RBP24.2■■□□□ 1.47
HMGN1-206ENST00000431390 CRYBG1Q9Y4K1 1723 aa24.2■■□□□ 1.47
HMGN1-206ENST00000431390 GCP02774 474 aa24.19■■□□□ 1.46
HMGN1-206ENST00000431390 U2AF1L5P0DN76 240 aaPredicted RBP24.19■■□□□ 1.46
HMGN1-206ENST00000431390 IL13P35225 146 aa24.19■■□□□ 1.46
HMGN1-206ENST00000431390 U2AF1Q01081 240 aaKnown RBP eCLIP24.19■■□□□ 1.464e-7■■■■■ 29.1
HMGN1-206ENST00000431390 AMPHP49418 695 aa24.18■■□□□ 1.46
HMGN1-206ENST00000431390 U2SURPO15042 1029 aaKnown RBP24.17■■□□□ 1.46
HMGN1-206ENST00000431390 KRT27Q7Z3Y8 459 aa24.17■■□□□ 1.46
HMGN1-206ENST00000431390 ONECUT3O60422 494 aaPredicted RBP24.16■■□□□ 1.46
HMGN1-206ENST00000431390 LRP5O75197 1615 aa24.16■■□□□ 1.46
HMGN1-206ENST00000431390 FAM83GA6ND36 823 aa24.16■■□□□ 1.46
HMGN1-206ENST00000431390 HSP90AB2PQ58FF8 381 aa24.15■■□□□ 1.46
HMGN1-206ENST00000431390 RGPD1P0DJD0 1748 aa24.14■■□□□ 1.46
HMGN1-206ENST00000431390 A0A0G2JS52 829 aa24.14■■□□□ 1.45
HMGN1-206ENST00000431390 HOXC9P31274 260 aa24.14■■□□□ 1.45
HMGN1-206ENST00000431390 MYT1Q01538 1121 aa24.14■■□□□ 1.45
HMGN1-206ENST00000431390 RUNDC1Q96C34 613 aa24.14■■□□□ 1.45
HMGN1-206ENST00000431390 PNNQ9H307 717 aaKnown RBP24.14■■□□□ 1.45
HMGN1-206ENST00000431390 COL14A1Q05707 1796 aaKnown RBP24.14■■□□□ 1.45
HMGN1-206ENST00000431390 EIF4A2Q14240 407 aaKnown RBP24.13■■□□□ 1.45
HMGN1-206ENST00000431390 ARHGEF25Q86VW2 580 aa24.13■■□□□ 1.45
HMGN1-206ENST00000431390 CCDC146Q8IYE0 955 aa24.13■■□□□ 1.45
HMGN1-206ENST00000431390 NGEFQ8N5V2 710 aa24.12■■□□□ 1.45
HMGN1-206ENST00000431390 FCHSD2O94868 740 aa24.12■■□□□ 1.45
HMGN1-206ENST00000431390 IP6K1Q92551 441 aa24.12■■□□□ 1.45
HMGN1-206ENST00000431390 FAM98CQ17RN3 349 aaKnown RBP24.1■■□□□ 1.45
HMGN1-206ENST00000431390 ABCC6O95255 1503 aa24.09■■□□□ 1.45
HMGN1-206ENST00000431390 BTG4Q9NY30 223 aa24.09■■□□□ 1.45
HMGN1-206ENST00000431390 APAF1O14727 1248 aa24.08■■□□□ 1.45
HMGN1-206ENST00000431390 PLEKHF1Q96S99 279 aa24.08■■□□□ 1.45
HMGN1-206ENST00000431390 NCBP3Q53F19 620 aaKnown RBP24.08■■□□□ 1.44
HMGN1-206ENST00000431390 RSPH6AQ9H0K4 717 aa24.08■■□□□ 1.44
HMGN1-206ENST00000431390 PSDA5PKW4 1024 aaPredicted RBP24.07■■□□□ 1.44
HMGN1-206ENST00000431390 BAG6P46379 1132 aa24.07■■□□□ 1.44
HMGN1-206ENST00000431390 CPDO75976 1380 aa24.06■■□□□ 1.44
HMGN1-206ENST00000431390 TNS1Q9HBL0 1735 aaKnown RBP24.05■■□□□ 1.44
HMGN1-206ENST00000431390 COL18A1P39060 1754 aa24.04■■□□□ 1.44
HMGN1-206ENST00000431390 THSD7AQ9UPZ6 1657 aa24.04■■□□□ 1.44
HMGN1-206ENST00000431390 TCP11L2Q8N4U5 519 aa24.04■■□□□ 1.44
HMGN1-206ENST00000431390 MAPK8IP3Q9UPT6 1336 aa24.04■■□□□ 1.44
HMGN1-206ENST00000431390 SENP3-EIF4A1A0A087X0R7 540 aa24.03■■□□□ 1.44
HMGN1-206ENST00000431390 PDE3BQ13370 1112 aa24.03■■□□□ 1.44
HMGN1-206ENST00000431390 IGSF1Q8N6C5 1336 aa24.03■■□□□ 1.44
HMGN1-206ENST00000431390 HMOX1P09601 288 aa24.03■■□□□ 1.44
HMGN1-206ENST00000431390 PRKAR2BP31323 418 aa24.03■■□□□ 1.44
HMGN1-206ENST00000431390 ZC3H6P61129 1189 aaKnown RBP24.03■■□□□ 1.44
HMGN1-206ENST00000431390 FAM182BQ5T319 152 aa24.03■■□□□ 1.44
HMGN1-206ENST00000431390 SALL2Q9Y467 1007 aaPredicted RBP24.03■■□□□ 1.44
HMGN1-206ENST00000431390 ZBTB7CA1YPR0 619 aa24.02■■□□□ 1.44
HMGN1-206ENST00000431390 NEFMP07197 916 aa24.02■■□□□ 1.44
HMGN1-206ENST00000431390 ZNF521Q96K83 1311 aa24.02■■□□□ 1.44
HMGN1-206ENST00000431390 RGPD5Q99666 1765 aa24.02■■□□□ 1.44
HMGN1-206ENST00000431390 KDRP35968 1356 aa24.01■■□□□ 1.43
HMGN1-206ENST00000431390 SULT6B1Q6IMI4 303 aa24■■□□□ 1.43
HMGN1-206ENST00000431390 EYA1Q99502 592 aa24■■□□□ 1.43
HMGN1-206ENST00000431390 SPATA31A5Q5VU36 1347 aa24■■□□□ 1.43
HMGN1-206ENST00000431390 SPATA31A7Q8IWB4 1347 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms