RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 UHRF1BP1Q6BDS2 1440 aa20.82■□□□□ 0.92
SMARCA4-203ENST00000429416 TTC39AQ5SRH9 613 aa20.82■□□□□ 0.92
SMARCA4-203ENST00000429416 DUOX2Q9NRD8 1548 aa20.82■□□□□ 0.92
SMARCA4-203ENST00000429416 PHF14O94880 888 aa20.82■□□□□ 0.92
SMARCA4-203ENST00000429416 CCDC158Q5M9N0 1113 aa20.82■□□□□ 0.92
SMARCA4-203ENST00000429416 ZNF219Q9P2Y4 722 aaPredicted RBP20.82■□□□□ 0.92
SMARCA4-203ENST00000429416 TRIM29Q14134 588 aa20.81■□□□□ 0.92
SMARCA4-203ENST00000429416 AK7Q96M32 723 aa20.81■□□□□ 0.92
SMARCA4-203ENST00000429416 CHMP4CQ96CF2 233 aa20.81■□□□□ 0.92
SMARCA4-203ENST00000429416 FOXD4L6Q3SYB3 417 aaPredicted RBP20.81■□□□□ 0.92
SMARCA4-203ENST00000429416 FOXD4L3Q6VB84 417 aaPredicted RBP20.81■□□□□ 0.92
SMARCA4-203ENST00000429416 TMPOP42166 694 aaKnown RBP20.8■□□□□ 0.92
SMARCA4-203ENST00000429416 ACSBG1Q96GR2 724 aa20.8■□□□□ 0.92
SMARCA4-203ENST00000429416 FBLN1P23142 703 aa20.79■□□□□ 0.92
SMARCA4-203ENST00000429416 LRRC59Q96AG4 307 aaKnown RBP20.79■□□□□ 0.92
SMARCA4-203ENST00000429416 CCT4P50991 539 aaKnown RBP20.78■□□□□ 0.92
SMARCA4-203ENST00000429416 IFNL2Q8IZJ0 200 aa20.78■□□□□ 0.92
SMARCA4-203ENST00000429416 TAF7Q15545 349 aaPredicted RBP20.78■□□□□ 0.92
SMARCA4-203ENST00000429416 IGHMBP2P38935 993 aaKnown RBP20.78■□□□□ 0.92
SMARCA4-203ENST00000429416 CEP170Q5SW79 1584 aa20.77■□□□□ 0.92
SMARCA4-203ENST00000429416 ATP2B2Q01814 1243 aa20.76■□□□□ 0.91
SMARCA4-203ENST00000429416 DUSP27Q5VZP5 1158 aa20.76■□□□□ 0.91
SMARCA4-203ENST00000429416 WDR63Q8IWG1 891 aa20.76■□□□□ 0.91
SMARCA4-203ENST00000429416 GZF1Q9H116 711 aaPredicted RBP20.76■□□□□ 0.91
SMARCA4-203ENST00000429416 SCAF11Q99590 1463 aaKnown RBP20.76■□□□□ 0.91
SMARCA4-203ENST00000429416 ERC1Q8IUD2 1116 aa20.76■□□□□ 0.91
SMARCA4-203ENST00000429416 BCAR3O75815 825 aa20.75■□□□□ 0.91
SMARCA4-203ENST00000429416 SPINK5Q9NQ38 1064 aaPredicted RBP20.75■□□□□ 0.91
SMARCA4-203ENST00000429416 DDB1Q16531 1140 aa20.74■□□□□ 0.91
SMARCA4-203ENST00000429416 ZSCAN29Q8IWY8 852 aaPredicted RBP20.74■□□□□ 0.91
SMARCA4-203ENST00000429416 CNTROBQ8N137 903 aa20.74■□□□□ 0.91
SMARCA4-203ENST00000429416 RRP12Q5JTH9 1297 aaKnown RBP20.74■□□□□ 0.91
SMARCA4-203ENST00000429416 CEP126Q9P2H0 1117 aa20.74■□□□□ 0.91
SMARCA4-203ENST00000429416 CSPP1Q1MSJ5 1256 aa20.74■□□□□ 0.91
SMARCA4-203ENST00000429416 STK11IPQ8N1F8 1099 aa20.73■□□□□ 0.91
SMARCA4-203ENST00000429416 ATP10AO60312 1499 aa20.73■□□□□ 0.91
SMARCA4-203ENST00000429416 INTS3Q68E01 1043 aaKnown RBP20.73■□□□□ 0.91
SMARCA4-203ENST00000429416 FMNL2Q96PY5 1086 aa20.73■□□□□ 0.91
SMARCA4-203ENST00000429416 CTTNBP2Q8WZ74 1663 aa20.73■□□□□ 0.91
SMARCA4-203ENST00000429416 SRGAP3O43295 1099 aa20.72■□□□□ 0.91
SMARCA4-203ENST00000429416 TTC21BQ7Z4L5 1316 aa20.72■□□□□ 0.91
SMARCA4-203ENST00000429416 CHAF1AQ13111 956 aaPredicted RBP20.72■□□□□ 0.91
SMARCA4-203ENST00000429416 GPTP24298 496 aa20.72■□□□□ 0.91
SMARCA4-203ENST00000429416 FKBP4Q02790 459 aaKnown RBP eCLIP20.71■□□□□ 0.91
SMARCA4-203ENST00000429416 SYAP1Q96A49 352 aaPredicted RBP20.71■□□□□ 0.91
SMARCA4-203ENST00000429416 CCDC43Q96MW1 224 aaKnown RBP20.71■□□□□ 0.91
SMARCA4-203ENST00000429416 FOSBP53539 338 aa20.71■□□□□ 0.91
SMARCA4-203ENST00000429416 TRMT112Q9UI30 125 aaKnown RBP20.71■□□□□ 0.91
SMARCA4-203ENST00000429416 RFC4P35249 363 aa20.71■□□□□ 0.91
SMARCA4-203ENST00000429416 L1TD1Q5T7N2 865 aaKnown RBP20.71■□□□□ 0.91
SMARCA4-203ENST00000429416 ZCRB1Q8TBF4 217 aaKnown RBP20.71■□□□□ 0.91
SMARCA4-203ENST00000429416 RBM19Q9Y4C8 960 aaKnown RBP20.71■□□□□ 0.91
SMARCA4-203ENST00000429416 MYD88Q99836 296 aa20.71■□□□□ 0.91
SMARCA4-203ENST00000429416 KDM4AO75164 1064 aa20.7■□□□□ 0.9
SMARCA4-203ENST00000429416 ZBTB3Q9H5J0 574 aa20.7■□□□□ 0.9
SMARCA4-203ENST00000429416 ITSN2Q9NZM3 1697 aa20.7■□□□□ 0.9
SMARCA4-203ENST00000429416 HSP90AB2PQ58FF8 381 aa20.7■□□□□ 0.9
SMARCA4-203ENST00000429416 KIAA2012Q0VF49 1180 aa20.7■□□□□ 0.9
SMARCA4-203ENST00000429416 ANKIB1Q9P2G1 1089 aa20.7■□□□□ 0.9
SMARCA4-203ENST00000429416 NINLQ9Y2I6 1382 aa20.7■□□□□ 0.9
SMARCA4-203ENST00000429416 WDR97A6NE52 1622 aa20.7■□□□□ 0.9
SMARCA4-203ENST00000429416 SLC3A2P08195 630 aaKnown RBP20.7■□□□□ 0.9
SMARCA4-203ENST00000429416 TBX22Q9Y458 520 aa20.7■□□□□ 0.9
SMARCA4-203ENST00000429416 DISP1Q96F81 1524 aa20.7■□□□□ 0.9
SMARCA4-203ENST00000429416 RPGRQ92834 1020 aaKnown RBP20.69■□□□□ 0.9
SMARCA4-203ENST00000429416 PES1O00541 588 aaKnown RBP20.69■□□□□ 0.9
SMARCA4-203ENST00000429416 TPM4P67936 248 aa20.69■□□□□ 0.9
SMARCA4-203ENST00000429416 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.69■□□□□ 0.97e-8■■□□□ 12
SMARCA4-203ENST00000429416 WWC1Q8IX03 1113 aa20.69■□□□□ 0.9
SMARCA4-203ENST00000429416 PPIP5K1Q6PFW1 1433 aa20.68■□□□□ 0.9
SMARCA4-203ENST00000429416 RAI14Q9P0K7 980 aa20.68■□□□□ 0.9
SMARCA4-203ENST00000429416 TTC21AQ8NDW8 1320 aa20.67■□□□□ 0.9
SMARCA4-203ENST00000429416 LARP1Q6PKG0 1096 aaKnown RBP20.67■□□□□ 0.9
SMARCA4-203ENST00000429416 ATF7IPQ6VMQ6 1270 aa20.67■□□□□ 0.9
SMARCA4-203ENST00000429416 SART3Q15020 963 aaKnown RBP20.67■□□□□ 0.9
SMARCA4-203ENST00000429416 C11orf95C9JLR9 678 aaPredicted RBP20.67■□□□□ 0.9
SMARCA4-203ENST00000429416 METTL24Q5JXM2 366 aa20.67■□□□□ 0.9
SMARCA4-203ENST00000429416 ABCF2Q9UG63 623 aa20.67■□□□□ 0.9
SMARCA4-203ENST00000429416 PBRM1Q86U86 1689 aa20.66■□□□□ 0.9
SMARCA4-203ENST00000429416 BTG4Q9NY30 223 aa20.65■□□□□ 0.9
SMARCA4-203ENST00000429416 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.65■□□□□ 0.9
SMARCA4-203ENST00000429416 PDE4AP27815 886 aa20.65■□□□□ 0.9
SMARCA4-203ENST00000429416 AACSQ86V21 672 aa20.65■□□□□ 0.9
SMARCA4-203ENST00000429416 ZNF622Q969S3 477 aaKnown RBP eCLIP20.65■□□□□ 0.92e-8■■□□□ 13.2
SMARCA4-203ENST00000429416 LRP2BPQ9P2M1 347 aa20.65■□□□□ 0.9
SMARCA4-203ENST00000429416 PTPRKQ15262 1439 aa20.65■□□□□ 0.9
SMARCA4-203ENST00000429416 TMOD2Q9NZR1 351 aa20.64■□□□□ 0.9
SMARCA4-203ENST00000429416 ZRANB1Q9UGI0 708 aa20.64■□□□□ 0.9
SMARCA4-203ENST00000429416 CCDC184Q52MB2 194 aa20.64■□□□□ 0.89
SMARCA4-203ENST00000429416 HSP90AB3PQ58FF7 597 aa20.64■□□□□ 0.89
SMARCA4-203ENST00000429416 AAMPQ13685 434 aa20.64■□□□□ 0.89
SMARCA4-203ENST00000429416 RPRD2Q5VT52 1461 aaKnown RBP20.64■□□□□ 0.89
SMARCA4-203ENST00000429416 ORAI2Q96SN7 254 aa20.64■□□□□ 0.89
SMARCA4-203ENST00000429416 LRRCC1Q9C099 1032 aa20.64■□□□□ 0.89
SMARCA4-203ENST00000429416 PAXIP1Q6ZW49 1069 aaPredicted RBP20.63■□□□□ 0.89
SMARCA4-203ENST00000429416 TEX13AQ9BXU3 409 aaPredicted RBP20.63■□□□□ 0.89
SMARCA4-203ENST00000429416 WWC3Q9ULE0 1092 aa20.63■□□□□ 0.89
SMARCA4-203ENST00000429416 ATP6V1AP38606 617 aa20.63■□□□□ 0.89
SMARCA4-203ENST00000429416 SAFBQ15424 915 aaKnown RBP eCLIP20.63■□□□□ 0.89
SMARCA4-203ENST00000429416 PTMSP20962 102 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms