RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 EXOSC9Q06265 439 aaKnown RBP28.14■■■□□ 2.1
CNEP1R1-202ENST00000427478 NLRP6P59044 892 aa28.13■■■□□ 2.09
CNEP1R1-202ENST00000427478 C14orf37Q86TY3 774 aa28.13■■■□□ 2.09
CNEP1R1-202ENST00000427478 PDE3AQ14432 1141 aa28.12■■■□□ 2.09
CNEP1R1-202ENST00000427478 PAK3O75914 559 aaPredicted RBP28.11■■■□□ 2.09
CNEP1R1-202ENST00000427478 NUTM2GQ5VZR2 741 aa28.11■■■□□ 2.09
CNEP1R1-202ENST00000427478 AEBP1Q8IUX7 1158 aa28.11■■■□□ 2.09
CNEP1R1-202ENST00000427478 SBNO1A3KN83 1393 aa28.11■■■□□ 2.09
CNEP1R1-202ENST00000427478 CT47B1P0C2W7 299 aaPredicted RBP28.1■■■□□ 2.09
CNEP1R1-202ENST00000427478 SULT6B1Q6IMI4 303 aa28.1■■■□□ 2.09
CNEP1R1-202ENST00000427478 FLT4P35916 1363 aa28.1■■■□□ 2.09
CNEP1R1-202ENST00000427478 PANK1Q8TE04 598 aa28.09■■■□□ 2.09
CNEP1R1-202ENST00000427478 THUMPD2Q9BTF0 503 aaKnown RBP28.09■■■□□ 2.09
CNEP1R1-202ENST00000427478 ABTB2Q8N961 1025 aa28.08■■■□□ 2.09
CNEP1R1-202ENST00000427478 ESCO1Q5FWF5 840 aa28.07■■■□□ 2.08
CNEP1R1-202ENST00000427478 LAS1LQ9Y4W2 734 aaKnown RBP28.07■■■□□ 2.08
CNEP1R1-202ENST00000427478 AMPHP49418 695 aa28.06■■■□□ 2.08
CNEP1R1-202ENST00000427478 COG6Q9Y2V7 657 aa28.05■■■□□ 2.08
CNEP1R1-202ENST00000427478 KDM2BQ8NHM5 1336 aa28.04■■■□□ 2.08
CNEP1R1-202ENST00000427478 CALD1Q05682 793 aaKnown RBP28.04■■■□□ 2.08
CNEP1R1-202ENST00000427478 LMOD3Q0VAK6 560 aa28.04■■■□□ 2.08
CNEP1R1-202ENST00000427478 TNNQ9UQP3 1299 aa28.04■■■□□ 2.08
CNEP1R1-202ENST00000427478 ARHGEF10O15013 1369 aa28.03■■■□□ 2.08
CNEP1R1-202ENST00000427478 PROSER2Q86WR7 435 aaPredicted RBP28.02■■■□□ 2.08
CNEP1R1-202ENST00000427478 SMC4Q9NTJ3 1288 aa28.02■■■□□ 2.08
CNEP1R1-202ENST00000427478 LTN1O94822 1766 aa28.01■■■□□ 2.08
CNEP1R1-202ENST00000427478 CENPQQ7L2Z9 268 aaPredicted RBP28■■■□□ 2.07
CNEP1R1-202ENST00000427478 FAM83GA6ND36 823 aa28■■■□□ 2.07
CNEP1R1-202ENST00000427478 RLBP1P12271 317 aa28■■■□□ 2.07
CNEP1R1-202ENST00000427478 PSME1Q06323 249 aa28■■■□□ 2.07
CNEP1R1-202ENST00000427478 SSH1Q8WYL5 1049 aa28■■■□□ 2.07
CNEP1R1-202ENST00000427478 IFT57Q9NWB7 429 aa27.99■■■□□ 2.07
CNEP1R1-202ENST00000427478 GNAI1P63096 354 aa27.98■■■□□ 2.07
CNEP1R1-202ENST00000427478 CLUAP1Q96AJ1 413 aa27.98■■■□□ 2.07
CNEP1R1-202ENST00000427478 ZKSCAN2Q63HK3 967 aa27.97■■■□□ 2.07
CNEP1R1-202ENST00000427478 ORAI2Q96SN7 254 aa27.97■■■□□ 2.07
CNEP1R1-202ENST00000427478 STRCP1A6NGW2 1772 aa27.97■■■□□ 2.07
CNEP1R1-202ENST00000427478 DCTN1Q14203 1278 aa27.97■■■□□ 2.07
CNEP1R1-202ENST00000427478 KIF24Q5T7B8 1368 aa27.96■■■□□ 2.07
CNEP1R1-202ENST00000427478 HOXC9P31274 260 aa27.96■■■□□ 2.07
CNEP1R1-202ENST00000427478 ZNF853P0CG23 659 aa27.95■■■□□ 2.07
CNEP1R1-202ENST00000427478 TCERG1O14776 1098 aaKnown RBP27.95■■■□□ 2.06
CNEP1R1-202ENST00000427478 SKAP1Q86WV1 359 aa27.95■■■□□ 2.06
CNEP1R1-202ENST00000427478 MBIPQ9NS73 344 aa27.95■■■□□ 2.06
CNEP1R1-202ENST00000427478 EYA1Q99502 592 aa27.94■■■□□ 2.06
CNEP1R1-202ENST00000427478 IGSF1Q8N6C5 1336 aa27.94■■■□□ 2.06
CNEP1R1-202ENST00000427478 NFAT5O94916 1531 aa27.93■■■□□ 2.06
CNEP1R1-202ENST00000427478 KDRP35968 1356 aa27.93■■■□□ 2.06
CNEP1R1-202ENST00000427478 CFAP44Q96MT7 982 aa27.92■■■□□ 2.06
CNEP1R1-202ENST00000427478 KIF1AQ12756 1690 aa27.92■■■□□ 2.06
CNEP1R1-202ENST00000427478 FTSJ3Q8IY81 847 aaKnown RBP27.92■■■□□ 2.06
CNEP1R1-202ENST00000427478 FOXO3O43524 673 aa27.91■■■□□ 2.06
CNEP1R1-202ENST00000427478 DZIP1LQ8IYY4 767 aaKnown RBP27.91■■■□□ 2.06
CNEP1R1-202ENST00000427478 HSPA2P54652 639 aa27.91■■■□□ 2.06
CNEP1R1-202ENST00000427478 XPCQ01831 940 aaPredicted RBP27.91■■■□□ 2.06
CNEP1R1-202ENST00000427478 ALDH1L2Q3SY69 923 aa27.9■■■□□ 2.06
CNEP1R1-202ENST00000427478 NOB1Q9ULX3 412 aaKnown RBP27.9■■■□□ 2.06
CNEP1R1-202ENST00000427478 RTL1A6NKG5 1358 aa27.9■■■□□ 2.06
CNEP1R1-202ENST00000427478 TRPM3Q9HCF6 1732 aaPredicted RBP27.89■■■□□ 2.06
CNEP1R1-202ENST00000427478 TRIM27P14373 513 aa27.89■■■□□ 2.06
CNEP1R1-202ENST00000427478 C19orf44Q9H6X5 657 aa27.89■■■□□ 2.06
CNEP1R1-202ENST00000427478 C1orf167Q5SNV9 1468 aa27.89■■■□□ 2.06
CNEP1R1-202ENST00000427478 MS4A1P11836 297 aa27.88■■■□□ 2.05
CNEP1R1-202ENST00000427478 MVPQ14764 893 aaKnown RBP27.88■■■□□ 2.05
CNEP1R1-202ENST00000427478 TSPYL6Q8N831 410 aa27.88■■■□□ 2.05
CNEP1R1-202ENST00000427478 KIF16BQ96L93 1317 aa27.88■■■□□ 2.05
CNEP1R1-202ENST00000427478 ATF7IPQ6VMQ6 1270 aa27.88■■■□□ 2.05
CNEP1R1-202ENST00000427478 MCM10Q7L590 875 aa27.88■■■□□ 2.05
CNEP1R1-202ENST00000427478 LTV1Q96GA3 475 aaPredicted RBP27.88■■■□□ 2.05
CNEP1R1-202ENST00000427478 VAMP4O75379 141 aa27.86■■■□□ 2.05
CNEP1R1-202ENST00000427478 ZNF428Q96B54 188 aa27.86■■■□□ 2.05
CNEP1R1-202ENST00000427478 TMEM94Q12767 1356 aa27.86■■■□□ 2.05
CNEP1R1-202ENST00000427478 IGHDP01880 384 aa27.86■■■□□ 2.05
CNEP1R1-202ENST00000427478 AAMPQ13685 434 aa27.86■■■□□ 2.05
CNEP1R1-202ENST00000427478 MTHFSDQ2M296 383 aaKnown RBP27.86■■■□□ 2.05
CNEP1R1-202ENST00000427478 ELL2O00472 640 aaPredicted RBP27.85■■■□□ 2.05
CNEP1R1-202ENST00000427478 PHRF1Q9P1Y6 1649 aaKnown RBP27.84■■■□□ 2.05
CNEP1R1-202ENST00000427478 TWISTNBQ3B726 338 aaPredicted RBP27.83■■■□□ 2.05
CNEP1R1-202ENST00000427478 KCNH5Q8NCM2 988 aa27.83■■■□□ 2.05
CNEP1R1-202ENST00000427478 ZBTB7CA1YPR0 619 aa27.82■■■□□ 2.04
CNEP1R1-202ENST00000427478 C8orf58Q8NAV2 365 aa27.82■■■□□ 2.04
CNEP1R1-202ENST00000427478 IPO8O15397 1037 aaKnown RBP27.82■■■□□ 2.04
CNEP1R1-202ENST00000427478 IP6K1Q92551 441 aa27.82■■■□□ 2.04
CNEP1R1-202ENST00000427478 SLIT3O75094 1523 aa27.82■■■□□ 2.04
CNEP1R1-202ENST00000427478 PLEKHG5O94827 1062 aa27.81■■■□□ 2.04
CNEP1R1-202ENST00000427478 LMOD2Q6P5Q4 547 aa27.81■■■□□ 2.04
CNEP1R1-202ENST00000427478 MST1RQ04912 1400 aa27.81■■■□□ 2.04
CNEP1R1-202ENST00000427478 ATF3P18847 181 aa27.8■■■□□ 2.04
CNEP1R1-202ENST00000427478 PCDHB15Q9Y5E8 787 aa27.8■■■□□ 2.04
CNEP1R1-202ENST00000427478 KRT28Q7Z3Y7 464 aa27.8■■■□□ 2.04
CNEP1R1-202ENST00000427478 ITPRIPQ8IWB1 547 aa27.8■■■□□ 2.04
CNEP1R1-202ENST00000427478 GAS2L2Q8NHY3 880 aa27.8■■■□□ 2.04
CNEP1R1-202ENST00000427478 CRB1P82279 1406 aa27.79■■■□□ 2.04
CNEP1R1-202ENST00000427478 BRPF1P55201 1214 aaPredicted RBP27.79■■■□□ 2.04
CNEP1R1-202ENST00000427478 RGPD2P0DJD1 1756 aa27.79■■■□□ 2.04
CNEP1R1-202ENST00000427478 MRPL50Q8N5N7 158 aaKnown RBP27.79■■■□□ 2.04
CNEP1R1-202ENST00000427478 RTF1Q92541 710 aaKnown RBP27.79■■■□□ 2.04
CNEP1R1-202ENST00000427478 DCCP43146 1447 aa27.78■■■□□ 2.04
CNEP1R1-202ENST00000427478 CHL1O00533 1208 aa27.77■■■□□ 2.04
CNEP1R1-202ENST00000427478 TMEM57Q8N5G2 664 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms