RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 C4orf48Q5BLP8 95 aa11.24□□□□□ -0.61
HMGB1P32-201ENST00000425971 BPHLQ86WA6 291 aaPredicted RBP11.24□□□□□ -0.61
HMGB1P32-201ENST00000425971 PLPP7Q8NBV4 271 aa11.24□□□□□ -0.61
HMGB1P32-201ENST00000425971 PLA2G2EQ9NZK7 142 aa11.24□□□□□ -0.61
HMGB1P32-201ENST00000425971 MAGEB6P1A0A0J9YX57 407 aa11.23□□□□□ -0.61
HMGB1P32-201ENST00000425971 ITGBL1O95965 494 aaPredicted RBP11.23□□□□□ -0.61
HMGB1P32-201ENST00000425971 ERFEQ4G0M1 354 aa11.23□□□□□ -0.61
HMGB1P32-201ENST00000425971 DEPDC4Q8N2C3 294 aa11.23□□□□□ -0.61
HMGB1P32-201ENST00000425971 FOXJ1Q92949 421 aa11.23□□□□□ -0.61
HMGB1P32-201ENST00000425971 C1QTNF2Q9BXJ5 285 aa11.23□□□□□ -0.61
HMGB1P32-201ENST00000425971 CARD14Q9BXL6 1004 aa11.23□□□□□ -0.61
HMGB1P32-201ENST00000425971 CARNS1A5YM72 827 aa11.22□□□□□ -0.61
HMGB1P32-201ENST00000425971 LZTS3O60299 673 aaPredicted RBP11.22□□□□□ -0.61
HMGB1P32-201ENST00000425971 BRD1O95696 1058 aa11.22□□□□□ -0.61
HMGB1P32-201ENST00000425971 NCOA4Q13772 614 aa11.22□□□□□ -0.61
HMGB1P32-201ENST00000425971 TRAF7Q6Q0C0 670 aa11.22□□□□□ -0.61
HMGB1P32-201ENST00000425971 DZIP3Q86Y13 1208 aaKnown RBP11.22□□□□□ -0.61
HMGB1P32-201ENST00000425971 ZMIZ1Q9ULJ6 1067 aa11.22□□□□□ -0.61
HMGB1P32-201ENST00000425971 FAM196BA6NMK8 535 aa11.21□□□□□ -0.61
HMGB1P32-201ENST00000425971 MAP7D1Q3KQU3 841 aa11.21□□□□□ -0.61
HMGB1P32-201ENST00000425971 KCNC4Q03721 635 aa11.2□□□□□ -0.62
HMGB1P32-201ENST00000425971 MKRN1Q9UHC7 482 aaKnown RBP11.2□□□□□ -0.62
HMGB1P32-201ENST00000425971 PPEF1O14829 653 aaPredicted RBP11.19□□□□□ -0.62
HMGB1P32-201ENST00000425971 SH3BP2P78314 561 aa11.19□□□□□ -0.62
HMGB1P32-201ENST00000425971 CRTC2Q53ET0 693 aaPredicted RBP11.19□□□□□ -0.62
HMGB1P32-201ENST00000425971 USP17L15C9J2P7 530 aa11.18□□□□□ -0.62
HMGB1P32-201ENST00000425971 USP17L10C9JJH3 530 aa11.18□□□□□ -0.62
HMGB1P32-201ENST00000425971 USP17L13C9JLJ4 530 aa11.18□□□□□ -0.62
HMGB1P32-201ENST00000425971 USP17L12C9JPN9 530 aa11.18□□□□□ -0.62
HMGB1P32-201ENST00000425971 USP17L11C9JVI0 530 aa11.18□□□□□ -0.62
HMGB1P32-201ENST00000425971 USP17L21D6R901 530 aa11.18□□□□□ -0.62
HMGB1P32-201ENST00000425971 USP17L18D6R9N7 530 aa11.18□□□□□ -0.62
HMGB1P32-201ENST00000425971 USP17L22D6RA61 530 aa11.18□□□□□ -0.62
HMGB1P32-201ENST00000425971 USP17L17D6RBQ6 530 aa11.18□□□□□ -0.62
HMGB1P32-201ENST00000425971 USP17L19D6RCP7 530 aa11.18□□□□□ -0.62
HMGB1P32-201ENST00000425971 USP17L20D6RJB6 530 aa11.18□□□□□ -0.62
HMGB1P32-201ENST00000425971 ATP5J2-PTCD1G3V325 749 aa11.18□□□□□ -0.62
HMGB1P32-201ENST00000425971 KCNA1Q09470 495 aa11.18□□□□□ -0.62
HMGB1P32-201ENST00000425971 USP17L24Q0WX57 530 aa11.18□□□□□ -0.62
HMGB1P32-201ENST00000425971 AGERQ15109 404 aa11.18□□□□□ -0.62
HMGB1P32-201ENST00000425971 TRMT44Q8IYL2 757 aaKnown RBP11.18□□□□□ -0.62
HMGB1P32-201ENST00000425971 STK32AQ8WU08 396 aa11.18□□□□□ -0.62
HMGB1P32-201ENST00000425971 SLC10A4Q96EP9 437 aa11.18□□□□□ -0.62
HMGB1P32-201ENST00000425971 CCDC85AQ96PX6 553 aaPredicted RBP11.18□□□□□ -0.62
HMGB1P32-201ENST00000425971 NOVA2Q9UNW9 492 aaKnown RBP11.18□□□□□ -0.62
HMGB1P32-201ENST00000425971 RNF223E7ERA6 249 aa11.17□□□□□ -0.62
HMGB1P32-201ENST00000425971 PTK7Q13308 1070 aa11.17□□□□□ -0.62
HMGB1P32-201ENST00000425971 TSGA10IPQ3SY00 556 aa11.17□□□□□ -0.62
HMGB1P32-201ENST00000425971 TMEM164Q5U3C3 297 aa11.17□□□□□ -0.62
HMGB1P32-201ENST00000425971 ESPNB1AK53 854 aa11.16□□□□□ -0.62
HMGB1P32-201ENST00000425971 PATL2C9JE40 543 aaKnown RBP11.16□□□□□ -0.62
HMGB1P32-201ENST00000425971 GIGYF1O75420 1035 aaPredicted RBP11.16□□□□□ -0.62
HMGB1P32-201ENST00000425971 EML3Q32P44 896 aa11.16□□□□□ -0.62
HMGB1P32-201ENST00000425971 PLA2G2CQ5R387 149 aa11.16□□□□□ -0.62
HMGB1P32-201ENST00000425971 ANKLE1Q8NAG6 615 aa11.16□□□□□ -0.62
HMGB1P32-201ENST00000425971 DOLKQ9UPQ8 538 aa11.15□□□□□ -0.62
HMGB1P32-201ENST00000425971 TRIM32Q13049 653 aa11.14□□□□□ -0.63
HMGB1P32-201ENST00000425971 SHROOM4Q9ULL8 1493 aa11.13□□□□□ -0.63
HMGB1P32-201ENST00000425971 RASA1P20936 1047 aa11.13□□□□□ -0.63
HMGB1P32-201ENST00000425971 NBPF20Q3BBV1 942 aa11.13□□□□□ -0.63
HMGB1P32-201ENST00000425971 RNF20Q5VTR2 975 aa11.13□□□□□ -0.63
HMGB1P32-201ENST00000425971 LARP1Q6PKG0 1096 aaKnown RBP11.13□□□□□ -0.63
HMGB1P32-201ENST00000425971 CDV3Q9UKY7 258 aaKnown RBP11.13□□□□□ -0.63
HMGB1P32-201ENST00000425971 CCDC9Q9Y3X0 531 aaKnown RBP11.13□□□□□ -0.63
HMGB1P32-201ENST00000425971 GGCXP38435 758 aa11.12□□□□□ -0.63
HMGB1P32-201ENST00000425971 SKOR1P84550 965 aa11.12□□□□□ -0.63
HMGB1P32-201ENST00000425971 TRIM50Q86XT4 487 aa11.12□□□□□ -0.63
HMGB1P32-201ENST00000425971 SEPT12Q8IYM1 358 aa11.12□□□□□ -0.63
HMGB1P32-201ENST00000425971 NOD1Q9Y239 953 aa11.12□□□□□ -0.63
HMGB1P32-201ENST00000425971 ZBTB24O43167 697 aaPredicted RBP11.11□□□□□ -0.63
HMGB1P32-201ENST00000425971 WNT7BP56706 349 aa11.11□□□□□ -0.63
HMGB1P32-201ENST00000425971 CLDN10P78369 228 aa11.11□□□□□ -0.63
HMGB1P32-201ENST00000425971 ANKMY2Q8IV38 441 aa11.11□□□□□ -0.63
HMGB1P32-201ENST00000425971 OGFOD1Q8N543 542 aa11.11□□□□□ -0.63
HMGB1P32-201ENST00000425971 FAM69CQ0P6D2 419 aa11.1□□□□□ -0.63
HMGB1P32-201ENST00000425971 GZF1Q9H116 711 aaPredicted RBP11.1□□□□□ -0.63
HMGB1P32-201ENST00000425971 DKK1O94907 266 aa11.09□□□□□ -0.63
HMGB1P32-201ENST00000425971 RPIAP49247 311 aa11.09□□□□□ -0.63
HMGB1P32-201ENST00000425971 ATP1A2P50993 1020 aa11.09□□□□□ -0.63
HMGB1P32-201ENST00000425971 OXLD1Q5BKU9 147 aa11.09□□□□□ -0.63
HMGB1P32-201ENST00000425971 CCDC125Q86Z20 511 aa11.09□□□□□ -0.63
HMGB1P32-201ENST00000425971 CDCA7Q9BWT1 371 aaPredicted RBP11.09□□□□□ -0.63
HMGB1P32-201ENST00000425971 SLAIN2Q9P270 581 aa11.09□□□□□ -0.63
HMGB1P32-201ENST00000425971 MAP4K5Q9Y4K4 846 aa11.09□□□□□ -0.63
HMGB1P32-201ENST00000425971 VARSP26640 1264 aaKnown RBP11.08□□□□□ -0.64
HMGB1P32-201ENST00000425971 B4GALNT3Q6L9W6 998 aa11.08□□□□□ -0.64
HMGB1P32-201ENST00000425971 PPP1R18Q6NYC8 613 aa11.08□□□□□ -0.64
HMGB1P32-201ENST00000425971 SIX5Q8N196 739 aa11.08□□□□□ -0.64
HMGB1P32-201ENST00000425971 LARGE2Q8N3Y3 721 aa11.08□□□□□ -0.64
HMGB1P32-201ENST00000425971 FAM200AQ8TCP9 573 aa11.08□□□□□ -0.64
HMGB1P32-201ENST00000425971 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.08□□□□□ -0.64
HMGB1P32-201ENST00000425971 DNAAF2Q9NVR5 837 aaKnown RBP11.08□□□□□ -0.64
HMGB1P32-201ENST00000425971 KIAA1024Q9UPX6 916 aa11.08□□□□□ -0.64
HMGB1P32-201ENST00000425971 ZBTB7BO15156 539 aaPredicted RBP11.07□□□□□ -0.64
HMGB1P32-201ENST00000425971 GTF2IP78347 998 aa11.07□□□□□ -0.64
HMGB1P32-201ENST00000425971 DPYDQ12882 1025 aa11.07□□□□□ -0.64
HMGB1P32-201ENST00000425971 CLP1Q92989 425 aaKnown RBP11.07□□□□□ -0.64
HMGB1P32-201ENST00000425971 IFFO2Q5TF58 517 aa11.06□□□□□ -0.64
HMGB1P32-201ENST00000425971 ZNF594Q96JF6 807 aaPredicted RBP11.06□□□□□ -0.64
HMGB1P32-201ENST00000425971 KCTD15Q96SI1 283 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms