RNA–Protein interactions for RNA: ENST00000425393.1

RAB3GAP1-202, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2 BASIC

Gene RAB3GAP1, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-202ENST00000425393 SOBPA7XYQ1 873 aa11.39□□□□□ -0.59
RAB3GAP1-202ENST00000425393 RFC5P40937 340 aa11.39□□□□□ -0.59
RAB3GAP1-202ENST00000425393 VEGFBP49765 207 aa11.39□□□□□ -0.59
RAB3GAP1-202ENST00000425393 C6orf118Q5T5N4 469 aa11.39□□□□□ -0.59
RAB3GAP1-202ENST00000425393 LINC00528Q8N1L1 170 aa11.39□□□□□ -0.59
RAB3GAP1-202ENST00000425393 EPS8L1Q8TE68 723 aa11.39□□□□□ -0.59
RAB3GAP1-202ENST00000425393 SLC10A4Q96EP9 437 aa11.39□□□□□ -0.59
RAB3GAP1-202ENST00000425393 OCSTAMPQ9BR26 566 aa11.39□□□□□ -0.59
RAB3GAP1-202ENST00000425393 EMILIN1Q9Y6C2 1016 aa11.38□□□□□ -0.59
RAB3GAP1-202ENST00000425393 H3BM21 787 aa11.37□□□□□ -0.59
RAB3GAP1-202ENST00000425393 GOPCQ9HD26 462 aa11.37□□□□□ -0.59
RAB3GAP1-202ENST00000425393 BMP2P12643 396 aa11.36□□□□□ -0.59
RAB3GAP1-202ENST00000425393 GMPRP36959 345 aa11.36□□□□□ -0.59
RAB3GAP1-202ENST00000425393 NEUROD2Q15784 382 aa11.36□□□□□ -0.59
RAB3GAP1-202ENST00000425393 ZBTB33Q86T24 672 aa11.36□□□□□ -0.59
RAB3GAP1-202ENST00000425393 CDV3Q9UKY7 258 aaKnown RBP11.36□□□□□ -0.59
RAB3GAP1-202ENST00000425393 UPP2O95045 317 aa11.35□□□□□ -0.59
RAB3GAP1-202ENST00000425393 PTK2Q05397 1052 aa11.35□□□□□ -0.59
RAB3GAP1-202ENST00000425393 PPP1R26Q5T8A7 1209 aaPredicted RBP11.35□□□□□ -0.59
RAB3GAP1-202ENST00000425393 ZSCAN1Q8NBB4 408 aa11.35□□□□□ -0.59
RAB3GAP1-202ENST00000425393 KCTD15Q96SI1 283 aaPredicted RBP11.35□□□□□ -0.59
RAB3GAP1-202ENST00000425393 GPSM3Q9Y4H4 160 aa11.35□□□□□ -0.59
RAB3GAP1-202ENST00000425393 PCMTD1Q96MG8 357 aaPredicted RBP11.34□□□□□ -0.59
RAB3GAP1-202ENST00000425393 ADAM32Q8TC27 787 aa11.33□□□□□ -0.6
RAB3GAP1-202ENST00000425393 MAN1A2O60476 641 aa11.32□□□□□ -0.6
RAB3GAP1-202ENST00000425393 PRKCSHP14314 528 aaPredicted RBP11.32□□□□□ -0.6
RAB3GAP1-202ENST00000425393 PNMA1Q8ND90 353 aa11.32□□□□□ -0.6
RAB3GAP1-202ENST00000425393 TSEN34Q9BSV6 310 aaKnown RBP11.32□□□□□ -0.6
RAB3GAP1-202ENST00000425393 ERBB4Q15303 1308 aa11.32□□□□□ -0.6
RAB3GAP1-202ENST00000425393 TPRNQ4KMQ1 711 aa11.31□□□□□ -0.6
RAB3GAP1-202ENST00000425393 INTS6LQ5JSJ4 861 aaKnown RBP11.31□□□□□ -0.6
RAB3GAP1-202ENST00000425393 PGPEP1Q9NXJ5 209 aa11.31□□□□□ -0.6
RAB3GAP1-202ENST00000425393 SOS2Q07890 1332 aaPredicted RBP11.31□□□□□ -0.6
RAB3GAP1-202ENST00000425393 CBLBQ13191 982 aa11.3□□□□□ -0.6
RAB3GAP1-202ENST00000425393 Q6ZVU0 165 aa11.3□□□□□ -0.6
RAB3GAP1-202ENST00000425393 IL27Q8NEV9 243 aa11.3□□□□□ -0.6
RAB3GAP1-202ENST00000425393 TRIM34Q9BYJ4 488 aa11.3□□□□□ -0.6
RAB3GAP1-202ENST00000425393 BRPF1P55201 1214 aaPredicted RBP11.29□□□□□ -0.6
RAB3GAP1-202ENST00000425393 DHX9Q08211 1270 aaKnown RBP11.29□□□□□ -0.6
RAB3GAP1-202ENST00000425393 DNMT3LQ9UJW3 386 aa11.29□□□□□ -0.6
RAB3GAP1-202ENST00000425393 NBPF20Q3BBV1 942 aa11.28□□□□□ -0.6
RAB3GAP1-202ENST00000425393 TMEM259Q4ZIN3 620 aa11.27□□□□□ -0.61
RAB3GAP1-202ENST00000425393 VSIG8P0DPA2 414 aa11.25□□□□□ -0.61
RAB3GAP1-202ENST00000425393 GJD4Q96KN9 370 aaPredicted RBP11.24□□□□□ -0.61
RAB3GAP1-202ENST00000425393 TTLL8A6PVC2 850 aa11.23□□□□□ -0.61
RAB3GAP1-202ENST00000425393 SPINT1O43278 529 aa11.23□□□□□ -0.61
RAB3GAP1-202ENST00000425393 DZIP3Q86Y13 1208 aaKnown RBP11.23□□□□□ -0.61
RAB3GAP1-202ENST00000425393 PPFIA3O75145 1194 aa11.22□□□□□ -0.61
RAB3GAP1-202ENST00000425393 LORP23490 312 aaPredicted RBP11.22□□□□□ -0.61
RAB3GAP1-202ENST00000425393 RAB15P59190 212 aa11.22□□□□□ -0.61
RAB3GAP1-202ENST00000425393 TMPRSS4Q9NRS4 437 aa11.22□□□□□ -0.61
RAB3GAP1-202ENST00000425393 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.21□□□□□ -0.61
RAB3GAP1-202ENST00000425393 ZNF784Q8NCA9 323 aaPredicted RBP11.21□□□□□ -0.61
RAB3GAP1-202ENST00000425393 AGBL1Q96MI9 1066 aa11.21□□□□□ -0.61
RAB3GAP1-202ENST00000425393 ESPNB1AK53 854 aa11.2□□□□□ -0.62
RAB3GAP1-202ENST00000425393 ERVH48-1M5A8F1 160 aa11.19□□□□□ -0.62
RAB3GAP1-202ENST00000425393 RELBQ01201 579 aa11.19□□□□□ -0.62
RAB3GAP1-202ENST00000425393 FIGNL2A6NMB9 653 aa11.18□□□□□ -0.62
RAB3GAP1-202ENST00000425393 ZBBXA8MT70 800 aa11.18□□□□□ -0.62
RAB3GAP1-202ENST00000425393 LILRA1O75019 489 aa11.17□□□□□ -0.62
RAB3GAP1-202ENST00000425393 FBXO45P0C2W1 286 aa11.17□□□□□ -0.62
RAB3GAP1-202ENST00000425393 PTSQ03393 145 aa11.17□□□□□ -0.62
RAB3GAP1-202ENST00000425393 CTSOP43234 321 aaPredicted RBP11.16□□□□□ -0.62
RAB3GAP1-202ENST00000425393 INSM2Q96T92 566 aaPredicted RBP11.16□□□□□ -0.62
RAB3GAP1-202ENST00000425393 ADH1AP07327 375 aa11.15□□□□□ -0.62
RAB3GAP1-202ENST00000425393 SEPT12Q8IYM1 358 aa11.15□□□□□ -0.62
RAB3GAP1-202ENST00000425393 ADD1P35611 737 aaKnown RBP11.14□□□□□ -0.63
RAB3GAP1-202ENST00000425393 ZNF395Q9H8N7 513 aaPredicted RBP11.14□□□□□ -0.63
RAB3GAP1-202ENST00000425393 SOCS7O14512 581 aa11.13□□□□□ -0.63
RAB3GAP1-202ENST00000425393 GPR37L1O60883 481 aa11.13□□□□□ -0.63
RAB3GAP1-202ENST00000425393 KDF1Q8NAX2 398 aaPredicted RBP11.13□□□□□ -0.63
RAB3GAP1-202ENST00000425393 MTMR14Q8NCE2 650 aa11.13□□□□□ -0.63
RAB3GAP1-202ENST00000425393 BANK1Q8NDB2 785 aa11.13□□□□□ -0.63
RAB3GAP1-202ENST00000425393 POLMQ9NP87 494 aaPredicted RBP11.13□□□□□ -0.63
RAB3GAP1-202ENST00000425393 PCDHB9Q9Y5E1 797 aa11.13□□□□□ -0.63
RAB3GAP1-202ENST00000425393 RNF217Q8TC41 542 aa11.12□□□□□ -0.63
RAB3GAP1-202ENST00000425393 GIGYF1O75420 1035 aaPredicted RBP11.11□□□□□ -0.63
RAB3GAP1-202ENST00000425393 CCDC155Q8N6L0 562 aa11.11□□□□□ -0.63
RAB3GAP1-202ENST00000425393 CYLDQ9NQC7 956 aa11.11□□□□□ -0.63
RAB3GAP1-202ENST00000425393 SLC35F4A4IF30 521 aa11.1□□□□□ -0.63
RAB3GAP1-202ENST00000425393 PTGIRP43119 386 aa11.09□□□□□ -0.63
RAB3GAP1-202ENST00000425393 FOXD4L5Q5VV16 416 aaPredicted RBP11.09□□□□□ -0.63
RAB3GAP1-202ENST00000425393 NR1H3Q13133 447 aa11.08□□□□□ -0.64
RAB3GAP1-202ENST00000425393 GPR161Q8N6U8 529 aaKnown RBP11.08□□□□□ -0.64
RAB3GAP1-202ENST00000425393 NDUFB9Q9Y6M9 179 aa11.08□□□□□ -0.64
RAB3GAP1-202ENST00000425393 SNRKQ9NRH2 765 aa11.07□□□□□ -0.64
RAB3GAP1-202ENST00000425393 KRT76Q01546 638 aa11.06□□□□□ -0.64
RAB3GAP1-202ENST00000425393 NANOS1Q8WY41 292 aaKnown RBP11.06□□□□□ -0.64
RAB3GAP1-202ENST00000425393 SENP3-EIF4A1A0A087X0R7 540 aa11.05□□□□□ -0.64
RAB3GAP1-202ENST00000425393 TRIM52Q96A61 297 aa11.05□□□□□ -0.64
RAB3GAP1-202ENST00000425393 ITGA6P23229 1130 aa11.04□□□□□ -0.64
RAB3GAP1-202ENST00000425393 ATP5J2-PTCD1G3V325 749 aa11.03□□□□□ -0.64
RAB3GAP1-202ENST00000425393 APBB1O00213 710 aa11.03□□□□□ -0.64
RAB3GAP1-202ENST00000425393 ERVK-9P63128 1117 aa11.03□□□□□ -0.64
RAB3GAP1-202ENST00000425393 CCDC125Q86Z20 511 aa11.03□□□□□ -0.64
RAB3GAP1-202ENST00000425393 MCCD1P59942 119 aaPredicted RBP11.02□□□□□ -0.65
RAB3GAP1-202ENST00000425393 RNF20Q5VTR2 975 aa11.02□□□□□ -0.65
RAB3GAP1-202ENST00000425393 ZNF592Q92610 1267 aa11.02□□□□□ -0.65
RAB3GAP1-202ENST00000425393 ZNF330Q9Y3S2 320 aaPredicted RBP11.02□□□□□ -0.65
RAB3GAP1-202ENST00000425393 CC2D2BQ6DHV5 1058 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms