RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 ARHGEF25Q86VW2 580 aa25.23■■□□□ 1.63
GPC1-203ENST00000425056 PSDA5PKW4 1024 aaPredicted RBP25.22■■□□□ 1.63
GPC1-203ENST00000425056 EZH2Q15910 746 aaKnown RBP25.22■■□□□ 1.63
GPC1-203ENST00000425056 CAMKK2Q96RR4 588 aa25.22■■□□□ 1.63
GPC1-203ENST00000425056 WDR17Q8IZU2 1322 aa25.21■■□□□ 1.63
GPC1-203ENST00000425056 AXIN2Q9Y2T1 843 aa25.21■■□□□ 1.63
GPC1-203ENST00000425056 NUP188Q5SRE5 1749 aa25.2■■□□□ 1.62
GPC1-203ENST00000425056 OVOS2A0A0G2JMS6 1433 aa25.2■■□□□ 1.62
GPC1-203ENST00000425056 OVOS2A0A0J9YW53 1432 aa25.2■■□□□ 1.62
GPC1-203ENST00000425056 OVOS2Q6IE36 1432 aa25.2■■□□□ 1.62
GPC1-203ENST00000425056 APBA3O96018 575 aa25.19■■□□□ 1.62
GPC1-203ENST00000425056 TOM1L2Q6ZVM7 507 aa25.19■■□□□ 1.62
GPC1-203ENST00000425056 USP31Q70CQ4 1352 aa25.18■■□□□ 1.62
GPC1-203ENST00000425056 SBF2Q86WG5 1849 aa25.18■■□□□ 1.62
GPC1-203ENST00000425056 C11orf95C9JLR9 678 aaPredicted RBP25.17■■□□□ 1.62
GPC1-203ENST00000425056 SOX12O15370 315 aa25.16■■□□□ 1.62
GPC1-203ENST00000425056 RGPD3A6NKT7 1758 aaPredicted RBP25.16■■□□□ 1.62
GPC1-203ENST00000425056 RGPD4Q7Z3J3 1758 aa25.16■■□□□ 1.62
GPC1-203ENST00000425056 EDC4Q6P2E9 1401 aaKnown RBP25.15■■□□□ 1.62
GPC1-203ENST00000425056 R3HDM1Q15032 1099 aaKnown RBP25.15■■□□□ 1.62
GPC1-203ENST00000425056 LTN1O94822 1766 aa25.14■■□□□ 1.62
GPC1-203ENST00000425056 PUS7Q96PZ0 661 aaKnown RBP25.14■■□□□ 1.62
GPC1-203ENST00000425056 DDB1Q16531 1140 aa25.13■■□□□ 1.61
GPC1-203ENST00000425056 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.13■■□□□ 1.61
GPC1-203ENST00000425056 CDCA7Q9BWT1 371 aaPredicted RBP25.13■■□□□ 1.61
GPC1-203ENST00000425056 CARD10Q9BWT7 1032 aa25.12■■□□□ 1.61
GPC1-203ENST00000425056 A0A1W2PP64 1363 aa25.12■■□□□ 1.61
GPC1-203ENST00000425056 TRIM26Q12899 539 aaPredicted RBP25.11■■□□□ 1.61
GPC1-203ENST00000425056 HDGFL2Q7Z4V5 671 aaPredicted RBP25.11■■□□□ 1.61
GPC1-203ENST00000425056 NME9Q86XW9 330 aa25.11■■□□□ 1.61
GPC1-203ENST00000425056 TMC1Q8TDI8 760 aa25.11■■□□□ 1.61
GPC1-203ENST00000425056 SLC12A5Q9H2X9 1139 aa25.11■■□□□ 1.61
GPC1-203ENST00000425056 BCL9O00512 1426 aa25.11■■□□□ 1.61
GPC1-203ENST00000425056 CCDC7Q96M83 1385 aa25.09■■□□□ 1.61
GPC1-203ENST00000425056 NINLQ9Y2I6 1382 aa25.09■■□□□ 1.61
GPC1-203ENST00000425056 CSB-PGBD3P0DP91 1061 aa25.09■■□□□ 1.61
GPC1-203ENST00000425056 TESK2Q96S53 571 aa25.09■■□□□ 1.61
GPC1-203ENST00000425056 TERF2IPQ9NYB0 399 aa25.08■■□□□ 1.61
GPC1-203ENST00000425056 TNS2Q63HR2 1409 aa25.06■■□□□ 1.6
GPC1-203ENST00000425056 ERBB3P21860 1342 aa25.06■■□□□ 1.6
GPC1-203ENST00000425056 ST20-MTHFSA0A0A6YYL1 179 aa25.04■■□□□ 1.6
GPC1-203ENST00000425056 MARCH10Q8NA82 808 aaPredicted RBP25.04■■□□□ 1.6
GPC1-203ENST00000425056 PLSCR1O15162 318 aa25.02■■□□□ 1.6
GPC1-203ENST00000425056 SLC24A1O60721 1099 aa25.02■■□□□ 1.6
GPC1-203ENST00000425056 BCL11BQ9C0K0 894 aaPredicted RBP25.02■■□□□ 1.6
GPC1-203ENST00000425056 NBPF14Q5TI25 921 aa25.01■■□□□ 1.59
GPC1-203ENST00000425056 FAM208AQ9UK61 1670 aaKnown RBP25■■□□□ 1.59
GPC1-203ENST00000425056 EXOC5O00471 708 aa24.98■■□□□ 1.59
GPC1-203ENST00000425056 PTF1AQ7RTS3 328 aa24.98■■□□□ 1.59
GPC1-203ENST00000425056 NHSQ6T4R5 1651 aa24.97■■□□□ 1.59
GPC1-203ENST00000425056 ANKRD36BQ8N2N9 1353 aa24.96■■□□□ 1.59
GPC1-203ENST00000425056 USP47Q96K76 1375 aa24.96■■□□□ 1.59
GPC1-203ENST00000425056 ANKRD24Q8TF21 1146 aa24.96■■□□□ 1.59
GPC1-203ENST00000425056 NLRP2Q9NX02 1062 aa24.96■■□□□ 1.59
GPC1-203ENST00000425056 CASZ1Q86V15 1759 aa24.93■■□□□ 1.58
GPC1-203ENST00000425056 IL2RBP14784 551 aa24.92■■□□□ 1.58
GPC1-203ENST00000425056 IP6K1Q92551 441 aa24.92■■□□□ 1.58
GPC1-203ENST00000425056 COG3Q96JB2 828 aa24.91■■□□□ 1.58
GPC1-203ENST00000425056 ANO8Q9HCE9 1232 aaPredicted RBP24.91■■□□□ 1.58
GPC1-203ENST00000425056 TMF1P82094 1093 aa24.9■■□□□ 1.58
GPC1-203ENST00000425056 PROM2Q8N271 834 aa24.89■■□□□ 1.58
GPC1-203ENST00000425056 MAP3K19Q56UN5 1328 aa24.87■■□□□ 1.57
GPC1-203ENST00000425056 BTAF1O14981 1849 aa24.86■■□□□ 1.57
GPC1-203ENST00000425056 KIF20BQ96Q89 1820 aa24.86■■□□□ 1.57
GPC1-203ENST00000425056 MYOM1P52179 1685 aa24.86■■□□□ 1.57
GPC1-203ENST00000425056 RTL1A6NKG5 1358 aa24.86■■□□□ 1.57
GPC1-203ENST00000425056 KCNQ2O43526 872 aa24.86■■□□□ 1.57
GPC1-203ENST00000425056 HOXC9P31274 260 aa24.85■■□□□ 1.57
GPC1-203ENST00000425056 TXNRD1Q16881 649 aa24.85■■□□□ 1.57
GPC1-203ENST00000425056 SPON1Q9HCB6 807 aa24.85■■□□□ 1.57
GPC1-203ENST00000425056 RGPD2P0DJD1 1756 aa24.85■■□□□ 1.57
GPC1-203ENST00000425056 TIMELESSQ9UNS1 1208 aa24.83■■□□□ 1.57
GPC1-203ENST00000425056 PAPPAQ13219 1627 aa24.83■■□□□ 1.56
GPC1-203ENST00000425056 CDCA8Q53HL2 280 aa24.82■■□□□ 1.56
GPC1-203ENST00000425056 ACSBG1Q96GR2 724 aa24.82■■□□□ 1.56
GPC1-203ENST00000425056 CLSPNQ9HAW4 1339 aa24.82■■□□□ 1.56
GPC1-203ENST00000425056 SHANK3Q9BYB0 1731 aa24.81■■□□□ 1.56
GPC1-203ENST00000425056 FYB1O15117 783 aa24.81■■□□□ 1.56
GPC1-203ENST00000425056 AMPHP49418 695 aa24.81■■□□□ 1.56
GPC1-203ENST00000425056 LTV1Q96GA3 475 aaPredicted RBP24.81■■□□□ 1.56
GPC1-203ENST00000425056 FBLN1P23142 703 aa24.8■■□□□ 1.56
GPC1-203ENST00000425056 GGNBP2Q9H3C7 697 aa24.79■■□□□ 1.56
GPC1-203ENST00000425056 KAT6BQ8WYB5 2073 aa24.79■■□□□ 1.56
GPC1-203ENST00000425056 STK32BQ9NY57 414 aa24.78■■□□□ 1.56
GPC1-203ENST00000425056 MEGF6O75095 1541 aa24.77■■□□□ 1.56
GPC1-203ENST00000425056 DOT1LQ8TEK3 1739 aa24.77■■□□□ 1.56
GPC1-203ENST00000425056 RRS1Q15050 365 aaKnown RBP24.76■■□□□ 1.55
GPC1-203ENST00000425056 SLC15A2Q16348 729 aa24.76■■□□□ 1.55
GPC1-203ENST00000425056 PDGFDQ9GZP0 370 aaPredicted RBP24.76■■□□□ 1.55
GPC1-203ENST00000425056 PPP1R1BQ9UD71 204 aaPredicted RBP24.76■■□□□ 1.55
GPC1-203ENST00000425056 SMG6Q86US8 1419 aaKnown RBP24.74■■□□□ 1.55
GPC1-203ENST00000425056 KIF24Q5T7B8 1368 aa24.73■■□□□ 1.55
GPC1-203ENST00000425056 DDX54Q8TDD1 881 aaKnown RBP24.73■■□□□ 1.55
GPC1-203ENST00000425056 NSD3Q9BZ95 1437 aa24.72■■□□□ 1.55
GPC1-203ENST00000425056 FLT4P35916 1363 aa24.71■■□□□ 1.55
GPC1-203ENST00000425056 ANKRD26Q9UPS8 1709 aa24.71■■□□□ 1.55
GPC1-203ENST00000425056 INSRP06213 1382 aa24.7■■□□□ 1.55
GPC1-203ENST00000425056 ZBTB7AO95365 584 aa24.7■■□□□ 1.54
GPC1-203ENST00000425056 CARD14Q9BXL6 1004 aa24.7■■□□□ 1.54
GPC1-203ENST00000425056 PTGER2P43116 358 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms