RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.73■□□□□ 0.11
CTCFL-204ENST00000422869 PNPLA6Q8IY17 1366 aa15.73■□□□□ 0.11
CTCFL-204ENST00000422869 RPGRIP1LQ68CZ1 1315 aa15.72■□□□□ 0.11
CTCFL-204ENST00000422869 MCTP1Q6DN14 999 aa15.72■□□□□ 0.11
CTCFL-204ENST00000422869 LMBRD1Q9NUN5 540 aa15.72■□□□□ 0.11
CTCFL-204ENST00000422869 CDC42BPGQ6DT37 1551 aa15.72■□□□□ 0.11
CTCFL-204ENST00000422869 KNDC1Q76NI1 1749 aa15.72■□□□□ 0.11
CTCFL-204ENST00000422869 FYB1O15117 783 aa15.72■□□□□ 0.11
CTCFL-204ENST00000422869 TERF1P54274 439 aa15.72■□□□□ 0.11
CTCFL-204ENST00000422869 MRPL50Q8N5N7 158 aaKnown RBP15.72■□□□□ 0.11
CTCFL-204ENST00000422869 ZNF428Q96B54 188 aa15.72■□□□□ 0.11
CTCFL-204ENST00000422869 CAVIN1Q6NZI2 390 aaKnown RBP15.72■□□□□ 0.11
CTCFL-204ENST00000422869 DIAPH1O60610 1272 aaKnown RBP15.71■□□□□ 0.11
CTCFL-204ENST00000422869 PKP1Q13835 747 aa15.71■□□□□ 0.11
CTCFL-204ENST00000422869 HS1BP3Q53T59 392 aa15.71■□□□□ 0.11
CTCFL-204ENST00000422869 PDLIM2Q96JY6 352 aa15.71■□□□□ 0.11
CTCFL-204ENST00000422869 BCL11BQ9C0K0 894 aaPredicted RBP15.71■□□□□ 0.11
CTCFL-204ENST00000422869 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.71■□□□□ 0.11
CTCFL-204ENST00000422869 CD163L1Q9NR16 1453 aa15.71■□□□□ 0.11
CTCFL-204ENST00000422869 PDIA4P13667 645 aaKnown RBP15.71■□□□□ 0.11
CTCFL-204ENST00000422869 ARHGAP45Q92619 1136 aa15.71■□□□□ 0.11
CTCFL-204ENST00000422869 RBSNQ9H1K0 784 aa15.71■□□□□ 0.11
CTCFL-204ENST00000422869 ABCC4O15439 1325 aa15.7■□□□□ 0.1
CTCFL-204ENST00000422869 VAMP4O75379 141 aa15.7■□□□□ 0.1
CTCFL-204ENST00000422869 SAFB2Q14151 953 aaKnown RBP eCLIP15.7■□□□□ 0.1
CTCFL-204ENST00000422869 RABEP1Q15276 862 aa15.7■□□□□ 0.1
CTCFL-204ENST00000422869 NEXMIFQ5QGS0 1516 aa15.7■□□□□ 0.1
CTCFL-204ENST00000422869 NOL7Q9UMY1 257 aaKnown RBP15.7■□□□□ 0.1
CTCFL-204ENST00000422869 FAM135BQ49AJ0 1406 aa15.7■□□□□ 0.1
CTCFL-204ENST00000422869 NUCB2P80303 420 aa15.69■□□□□ 0.1
CTCFL-204ENST00000422869 NUTM2DQ5VT03 806 aaPredicted RBP15.69■□□□□ 0.1
CTCFL-204ENST00000422869 PIK3C2BO00750 1634 aa15.69■□□□□ 0.1
CTCFL-204ENST00000422869 TSPYL6Q8N831 410 aa15.69■□□□□ 0.1
CTCFL-204ENST00000422869 CHMP4BQ9H444 224 aaKnown RBP15.69■□□□□ 0.1
CTCFL-204ENST00000422869 SIGLEC1Q9BZZ2 1709 aa15.69■□□□□ 0.1
CTCFL-204ENST00000422869 ZNF500O60304 480 aaPredicted RBP15.69■□□□□ 0.1
CTCFL-204ENST00000422869 CALD1Q05682 793 aaKnown RBP15.69■□□□□ 0.1
CTCFL-204ENST00000422869 PLEKHM2Q8IWE5 1019 aa15.69■□□□□ 0.1
CTCFL-204ENST00000422869 HECW2Q9P2P5 1572 aa15.68■□□□□ 0.1
CTCFL-204ENST00000422869 KIF20BQ96Q89 1820 aa15.68■□□□□ 0.1
CTCFL-204ENST00000422869 FCHSD2O94868 740 aa15.68■□□□□ 0.1
CTCFL-204ENST00000422869 PRIM1P49642 420 aaKnown RBP15.68■□□□□ 0.1
CTCFL-204ENST00000422869 RBM10P98175 930 aaKnown RBP15.68■□□□□ 0.1
CTCFL-204ENST00000422869 NCLP19338 710 aaKnown RBP15.67■□□□□ 0.1
CTCFL-204ENST00000422869 FRMPD1Q5SYB0 1578 aa15.67■□□□□ 0.1
CTCFL-204ENST00000422869 SRPK2P78362 688 aaKnown RBP15.67■□□□□ 0.1
CTCFL-204ENST00000422869 GPT2Q8TD30 523 aa15.67■□□□□ 0.1
CTCFL-204ENST00000422869 USP26Q9BXU7 913 aa15.67■□□□□ 0.1
CTCFL-204ENST00000422869 R3HCC1Q9Y3T6 440 aaKnown RBP15.67■□□□□ 0.1
CTCFL-204ENST00000422869 CLTCQ00610 1675 aaKnown RBP15.67■□□□□ 0.1
CTCFL-204ENST00000422869 PRKAR2BP31323 418 aa15.66■□□□□ 0.1
CTCFL-204ENST00000422869 THUMPD2Q9BTF0 503 aaKnown RBP15.66■□□□□ 0.1
CTCFL-204ENST00000422869 TTC22Q5TAA0 569 aa15.66■□□□□ 0.1
CTCFL-204ENST00000422869 FGD1P98174 961 aa15.65■□□□□ 0.1
CTCFL-204ENST00000422869 XPCQ01831 940 aaPredicted RBP15.65■□□□□ 0.1
CTCFL-204ENST00000422869 ZFYVE9O95405 1425 aa15.65■□□□□ 0.1
CTCFL-204ENST00000422869 RBM27Q9P2N5 1060 aaKnown RBP15.65■□□□□ 0.1
CTCFL-204ENST00000422869 ZDHHC9Q9Y397 364 aa15.65■□□□□ 0.1
CTCFL-204ENST00000422869 YEATS2Q9ULM3 1422 aa15.65■□□□□ 0.1
CTCFL-204ENST00000422869 ZGPATQ8N5A5 531 aaKnown RBP15.64■□□□□ 0.09
CTCFL-204ENST00000422869 PHACTR3Q96KR7 559 aa15.64■□□□□ 0.09
CTCFL-204ENST00000422869 ABCC3O15438 1527 aa15.64■□□□□ 0.09
CTCFL-204ENST00000422869 PRPF40AO75400 957 aaKnown RBP15.64■□□□□ 0.09
CTCFL-204ENST00000422869 TERF2IPQ9NYB0 399 aa15.64■□□□□ 0.09
CTCFL-204ENST00000422869 ATAD2Q6PL18 1390 aa15.64■□□□□ 0.09
CTCFL-204ENST00000422869 PTPRMP28827 1452 aa15.64■□□□□ 0.09
CTCFL-204ENST00000422869 ELL2O00472 640 aaPredicted RBP15.63■□□□□ 0.09
CTCFL-204ENST00000422869 VGFO15240 615 aaPredicted RBP15.63■□□□□ 0.09
CTCFL-204ENST00000422869 CWC22Q9HCG8 908 aaKnown RBP15.63■□□□□ 0.09
CTCFL-204ENST00000422869 C16orf71Q8IYS4 520 aaPredicted RBP15.63■□□□□ 0.09
CTCFL-204ENST00000422869 KLHL34Q8N239 644 aa15.63■□□□□ 0.09
CTCFL-204ENST00000422869 DCTPP1Q9H773 170 aa15.63■□□□□ 0.09
CTCFL-204ENST00000422869 ZKSCAN5Q9Y2L8 839 aa15.63■□□□□ 0.09
CTCFL-204ENST00000422869 NFE2L2Q16236 605 aa15.63■□□□□ 0.09
CTCFL-204ENST00000422869 MBIPQ9NS73 344 aa15.63■□□□□ 0.09
CTCFL-204ENST00000422869 FAM13BQ9NYF5 915 aa15.63■□□□□ 0.09
CTCFL-204ENST00000422869 TMEM63CQ9P1W3 806 aa15.62■□□□□ 0.09
CTCFL-204ENST00000422869 DLG5Q8TDM6 1919 aa15.62■□□□□ 0.09
CTCFL-204ENST00000422869 ZNF853P0CG23 659 aa15.62■□□□□ 0.09
CTCFL-204ENST00000422869 GGT6Q6P531 493 aa15.62■□□□□ 0.09
CTCFL-204ENST00000422869 CHAMP1Q96JM3 812 aa15.62■□□□□ 0.09
CTCFL-204ENST00000422869 CFAP44Q96MT7 982 aa15.62■□□□□ 0.09
CTCFL-204ENST00000422869 IFT57Q9NWB7 429 aa15.62■□□□□ 0.09
CTCFL-204ENST00000422869 STK26Q9P289 416 aa15.62■□□□□ 0.09
CTCFL-204ENST00000422869 INTS3Q68E01 1043 aaKnown RBP15.61■□□□□ 0.09
CTCFL-204ENST00000422869 UQCRHLA0A096LP55 91 aa15.61■□□□□ 0.09
CTCFL-204ENST00000422869 UQCRHP07919 91 aa15.61■□□□□ 0.09
CTCFL-204ENST00000422869 LRSAM1Q6UWE0 723 aa15.61■□□□□ 0.09
CTCFL-204ENST00000422869 OTUD7AQ8TE49 926 aaPredicted RBP15.61■□□□□ 0.09
CTCFL-204ENST00000422869 NSFL1CQ9UNZ2 370 aaKnown RBP15.61■□□□□ 0.09
CTCFL-204ENST00000422869 MAP2P11137 1827 aaKnown RBP15.61■□□□□ 0.09
CTCFL-204ENST00000422869 FBLN1P23142 703 aa15.6■□□□□ 0.09
CTCFL-204ENST00000422869 GNAI1P63096 354 aa15.6■□□□□ 0.09
CTCFL-204ENST00000422869 ATP10DQ9P241 1426 aa15.6■□□□□ 0.09
CTCFL-204ENST00000422869 TWISTNBQ3B726 338 aaPredicted RBP15.6■□□□□ 0.09
CTCFL-204ENST00000422869 MAP7D2Q96T17 732 aa15.6■□□□□ 0.09
CTCFL-204ENST00000422869 MINK1Q8N4C8 1332 aaPredicted RBP15.6■□□□□ 0.09
CTCFL-204ENST00000422869 HMOX1P09601 288 aa15.6■□□□□ 0.09
CTCFL-204ENST00000422869 C8orf58Q8NAV2 365 aa15.6■□□□□ 0.09
CTCFL-204ENST00000422869 SYCE3A1L190 88 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms