RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 NALCNQ8IZF0 1738 aa17.67■□□□□ 0.42
CDCA3-202ENST00000422785 FTSJ3Q8IY81 847 aaKnown RBP17.67■□□□□ 0.42
CDCA3-202ENST00000422785 USP31Q70CQ4 1352 aa17.66■□□□□ 0.42
CDCA3-202ENST00000422785 CEP170BQ9Y4F5 1589 aaPredicted RBP17.66■□□□□ 0.42
CDCA3-202ENST00000422785 FAM161AQ3B820 660 aa17.66■□□□□ 0.42
CDCA3-202ENST00000422785 ALDH1L2Q3SY69 923 aa17.66■□□□□ 0.42
CDCA3-202ENST00000422785 PIK3R4Q99570 1358 aa17.66■□□□□ 0.42
CDCA3-202ENST00000422785 TTC21AQ8NDW8 1320 aa17.65■□□□□ 0.42
CDCA3-202ENST00000422785 RGS3P49796 1198 aa17.65■□□□□ 0.42
CDCA3-202ENST00000422785 NPM2Q86SE8 214 aaKnown RBP17.65■□□□□ 0.42
CDCA3-202ENST00000422785 ZNF428Q96B54 188 aa17.65■□□□□ 0.42
CDCA3-202ENST00000422785 PCDHB15Q9Y5E8 787 aa17.65■□□□□ 0.42
CDCA3-202ENST00000422785 LMOD3Q0VAK6 560 aa17.65■□□□□ 0.42
CDCA3-202ENST00000422785 ATF7IPQ6VMQ6 1270 aa17.65■□□□□ 0.42
CDCA3-202ENST00000422785 TRIM27P14373 513 aa17.64■□□□□ 0.41
CDCA3-202ENST00000422785 IFT57Q9NWB7 429 aa17.64■□□□□ 0.41
CDCA3-202ENST00000422785 ZBTB47Q9UFB7 747 aaPredicted RBP17.64■□□□□ 0.41
CDCA3-202ENST00000422785 KIF16BQ96L93 1317 aa17.64■□□□□ 0.41
CDCA3-202ENST00000422785 GNAI1P63096 354 aa17.63■□□□□ 0.41
CDCA3-202ENST00000422785 EIF4A2Q14240 407 aaKnown RBP17.63■□□□□ 0.41
CDCA3-202ENST00000422785 RIMS1Q86UR5 1692 aaKnown RBP17.63■□□□□ 0.41
CDCA3-202ENST00000422785 PAK3O75914 559 aaPredicted RBP17.63■□□□□ 0.41
CDCA3-202ENST00000422785 C8orf34Q49A92 452 aa17.63■□□□□ 0.41
CDCA3-202ENST00000422785 NOB1Q9ULX3 412 aaKnown RBP17.63■□□□□ 0.41
CDCA3-202ENST00000422785 IPO8O15397 1037 aaKnown RBP17.62■□□□□ 0.41
CDCA3-202ENST00000422785 ZNF853P0CG23 659 aa17.62■□□□□ 0.41
CDCA3-202ENST00000422785 DLG5Q8TDM6 1919 aa17.62■□□□□ 0.41
CDCA3-202ENST00000422785 BRPF1P55201 1214 aaPredicted RBP17.62■□□□□ 0.41
CDCA3-202ENST00000422785 RWDD1Q9H446 243 aaPredicted RBP17.62■□□□□ 0.41
CDCA3-202ENST00000422785 LAS1LQ9Y4W2 734 aaKnown RBP17.62■□□□□ 0.41
CDCA3-202ENST00000422785 THUMPD2Q9BTF0 503 aaKnown RBP17.62■□□□□ 0.41
CDCA3-202ENST00000422785 ANKARQ7Z5J8 1434 aa17.62■□□□□ 0.41
CDCA3-202ENST00000422785 RGPD8O14715 1765 aaPredicted RBP17.61■□□□□ 0.41
CDCA3-202ENST00000422785 PEAK1Q9H792 1746 aa17.61■□□□□ 0.41
CDCA3-202ENST00000422785 NGDNQ8NEJ9 315 aaKnown RBP17.61■□□□□ 0.41
CDCA3-202ENST00000422785 DDX19BQ9UMR2 479 aa17.61■□□□□ 0.41
CDCA3-202ENST00000422785 KCNA6P17658 529 aa17.6■□□□□ 0.41
CDCA3-202ENST00000422785 CFAP44Q96MT7 982 aa17.59■□□□□ 0.41
CDCA3-202ENST00000422785 RGPD1P0DJD0 1748 aa17.58■□□□□ 0.41
CDCA3-202ENST00000422785 VAMP4O75379 141 aa17.58■□□□□ 0.41
CDCA3-202ENST00000422785 SULT6B1Q6IMI4 303 aa17.58■□□□□ 0.41
CDCA3-202ENST00000422785 MBIPQ9NS73 344 aa17.58■□□□□ 0.41
CDCA3-202ENST00000422785 HSP90AB2PQ58FF8 381 aa17.58■□□□□ 0.4
CDCA3-202ENST00000422785 ITPRIPQ8IWB1 547 aa17.58■□□□□ 0.4
CDCA3-202ENST00000422785 AEBP1Q8IUX7 1158 aa17.57■□□□□ 0.4
CDCA3-202ENST00000422785 FMN2Q9NZ56 1722 aa17.57■□□□□ 0.4
CDCA3-202ENST00000422785 TMEM57Q8N5G2 664 aa17.57■□□□□ 0.4
CDCA3-202ENST00000422785 ZNF142P52746 1687 aaPredicted RBP17.56■□□□□ 0.4
CDCA3-202ENST00000422785 ANKLE2Q86XL3 938 aa17.56■□□□□ 0.4
CDCA3-202ENST00000422785 MAP3K19Q56UN5 1328 aa17.56■□□□□ 0.4
CDCA3-202ENST00000422785 PIK3C2AO00443 1686 aa17.55■□□□□ 0.4
CDCA3-202ENST00000422785 SBNO1A3KN83 1393 aa17.55■□□□□ 0.4
CDCA3-202ENST00000422785 ARHGAP45Q92619 1136 aa17.55■□□□□ 0.4
CDCA3-202ENST00000422785 DDRGK1Q96HY6 314 aa17.55■□□□□ 0.4
CDCA3-202ENST00000422785 FAM83GA6ND36 823 aa17.55■□□□□ 0.4
CDCA3-202ENST00000422785 HDAC1Q13547 482 aaPredicted RBP17.55■□□□□ 0.4
CDCA3-202ENST00000422785 TSPYL6Q8N831 410 aa17.55■□□□□ 0.4
CDCA3-202ENST00000422785 ARHGEF10O15013 1369 aa17.54■□□□□ 0.4
CDCA3-202ENST00000422785 FLT4P35916 1363 aa17.54■□□□□ 0.4
CDCA3-202ENST00000422785 MRPL50Q8N5N7 158 aaKnown RBP17.54■□□□□ 0.4
CDCA3-202ENST00000422785 PDZRN3Q9UPQ7 1066 aa17.54■□□□□ 0.4
CDCA3-202ENST00000422785 CHD2O14647 1828 aaKnown RBP17.54■□□□□ 0.4
CDCA3-202ENST00000422785 VIRMAQ69YN4 1812 aaKnown RBP17.54■□□□□ 0.4
CDCA3-202ENST00000422785 ZBTB40Q9NUA8 1239 aa17.54■□□□□ 0.4
CDCA3-202ENST00000422785 SOX12O15370 315 aa17.53■□□□□ 0.4
CDCA3-202ENST00000422785 TWISTNBQ3B726 338 aaPredicted RBP17.53■□□□□ 0.4
CDCA3-202ENST00000422785 ADAMTSL3P82987 1691 aa17.53■□□□□ 0.4
CDCA3-202ENST00000422785 DCTN1Q14203 1278 aa17.52■□□□□ 0.4
CDCA3-202ENST00000422785 C8orf58Q8NAV2 365 aa17.51■□□□□ 0.39
CDCA3-202ENST00000422785 USP54Q70EL1 1684 aa17.51■□□□□ 0.39
CDCA3-202ENST00000422785 NLRP6P59044 892 aa17.5■□□□□ 0.39
CDCA3-202ENST00000422785 ELL2O00472 640 aaPredicted RBP17.5■□□□□ 0.39
CDCA3-202ENST00000422785 KDRP35968 1356 aa17.49■□□□□ 0.39
CDCA3-202ENST00000422785 KIF24Q5T7B8 1368 aa17.49■□□□□ 0.39
CDCA3-202ENST00000422785 AMPHP49418 695 aa17.49■□□□□ 0.39
CDCA3-202ENST00000422785 SETD1BQ9UPS6 1966 aaKnown RBP17.49■□□□□ 0.39
CDCA3-202ENST00000422785 CHMP4BQ9H444 224 aaKnown RBP17.49■□□□□ 0.39
CDCA3-202ENST00000422785 MARF1Q9Y4F3 1742 aaKnown RBP17.48■□□□□ 0.39
CDCA3-202ENST00000422785 CHL1O00533 1208 aa17.48■□□□□ 0.39
CDCA3-202ENST00000422785 SMC5Q8IY18 1101 aa17.47■□□□□ 0.39
CDCA3-202ENST00000422785 IGSF1Q8N6C5 1336 aa17.47■□□□□ 0.39
CDCA3-202ENST00000422785 HAP1P54257 671 aaPredicted RBP17.47■□□□□ 0.39
CDCA3-202ENST00000422785 MCM10Q7L590 875 aa17.46■□□□□ 0.39
CDCA3-202ENST00000422785 ABCC4O15439 1325 aa17.46■□□□□ 0.39
CDCA3-202ENST00000422785 EYA1Q99502 592 aa17.46■□□□□ 0.39
CDCA3-202ENST00000422785 PHF8Q9UPP1 1060 aa17.46■□□□□ 0.39
CDCA3-202ENST00000422785 KIAA0232Q92628 1395 aa17.46■□□□□ 0.38
CDCA3-202ENST00000422785 ZBTB7BO15156 539 aaPredicted RBP17.45■□□□□ 0.38
CDCA3-202ENST00000422785 ABTB2Q8N961 1025 aa17.45■□□□□ 0.38
CDCA3-202ENST00000422785 API5Q9BZZ5 524 aaKnown RBP17.45■□□□□ 0.38
CDCA3-202ENST00000422785 CRB1P82279 1406 aa17.45■□□□□ 0.38
CDCA3-202ENST00000422785 MTHFSDQ2M296 383 aaKnown RBP17.44■□□□□ 0.38
CDCA3-202ENST00000422785 ADGRL3Q9HAR2 1447 aa17.44■□□□□ 0.38
CDCA3-202ENST00000422785 HOXC9P31274 260 aa17.44■□□□□ 0.38
CDCA3-202ENST00000422785 NUTM2GQ5VZR2 741 aa17.43■□□□□ 0.38
CDCA3-202ENST00000422785 USP19O94966 1318 aa17.42■□□□□ 0.38
CDCA3-202ENST00000422785 NPHP4O75161 1426 aaPredicted RBP17.42■□□□□ 0.38
CDCA3-202ENST00000422785 GAS2L2Q8NHY3 880 aa17.42■□□□□ 0.38
CDCA3-202ENST00000422785 RTF1Q92541 710 aaKnown RBP17.41■□□□□ 0.38
CDCA3-202ENST00000422785 FOXO3O43524 673 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms