RNA–Protein interactions for RNA: ENST00000420103.1

CHCHD4-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 3

Gene CHCHD4, Length 584 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-203ENST00000420103 SBF2Q86WG5 1849 aa16.93■□□□□ 0.3
CHCHD4-203ENST00000420103 SOX12O15370 315 aa16.93■□□□□ 0.3
CHCHD4-203ENST00000420103 ARHGEF25Q86VW2 580 aa16.93■□□□□ 0.3
CHCHD4-203ENST00000420103 BCL11BQ9C0K0 894 aaPredicted RBP16.93■□□□□ 0.3
CHCHD4-203ENST00000420103 PPP1R1BQ9UD71 204 aaPredicted RBP16.93■□□□□ 0.3
CHCHD4-203ENST00000420103 WDR17Q8IZU2 1322 aa16.93■□□□□ 0.3
CHCHD4-203ENST00000420103 ZBTB7AO95365 584 aa16.92■□□□□ 0.3
CHCHD4-203ENST00000420103 L3MBTL2Q969R5 705 aa16.92■□□□□ 0.3
CHCHD4-203ENST00000420103 SIN3AQ96ST3 1273 aa16.92■□□□□ 0.3
CHCHD4-203ENST00000420103 TTC21BQ7Z4L5 1316 aa16.92■□□□□ 0.3
CHCHD4-203ENST00000420103 BRD4O60885 1362 aaPredicted RBP16.91■□□□□ 0.3
CHCHD4-203ENST00000420103 PTGER2P43116 358 aa16.91■□□□□ 0.3
CHCHD4-203ENST00000420103 CASZ1Q86V15 1759 aa16.91■□□□□ 0.3
CHCHD4-203ENST00000420103 CPSF1Q10570 1443 aaKnown RBP16.9■□□□□ 0.3
CHCHD4-203ENST00000420103 ATF5Q9Y2D1 282 aaPredicted RBP16.89■□□□□ 0.29
CHCHD4-203ENST00000420103 NINLQ9Y2I6 1382 aa16.89■□□□□ 0.29
CHCHD4-203ENST00000420103 CARD10Q9BWT7 1032 aa16.88■□□□□ 0.29
CHCHD4-203ENST00000420103 RGPD5Q99666 1765 aa16.87■□□□□ 0.29
CHCHD4-203ENST00000420103 C11orf95C9JLR9 678 aaPredicted RBP16.87■□□□□ 0.29
CHCHD4-203ENST00000420103 TXNRD1Q16881 649 aa16.87■□□□□ 0.29
CHCHD4-203ENST00000420103 RGPD3A6NKT7 1758 aaPredicted RBP16.87■□□□□ 0.29
CHCHD4-203ENST00000420103 RGPD4Q7Z3J3 1758 aa16.87■□□□□ 0.29
CHCHD4-203ENST00000420103 BCL9O00512 1426 aa16.87■□□□□ 0.29
CHCHD4-203ENST00000420103 EVC2Q86UK5 1308 aa16.86■□□□□ 0.29
CHCHD4-203ENST00000420103 WNK3Q9BYP7 1800 aa16.86■□□□□ 0.29
CHCHD4-203ENST00000420103 NFAT5O94916 1531 aa16.86■□□□□ 0.29
CHCHD4-203ENST00000420103 CSB-PGBD3P0DP91 1061 aa16.85■□□□□ 0.29
CHCHD4-203ENST00000420103 NEUROD1Q13562 356 aa16.85■□□□□ 0.29
CHCHD4-203ENST00000420103 MYOM1P52179 1685 aa16.85■□□□□ 0.29
CHCHD4-203ENST00000420103 EXOC5O00471 708 aa16.83■□□□□ 0.28
CHCHD4-203ENST00000420103 SLC15A2Q16348 729 aa16.83■□□□□ 0.28
CHCHD4-203ENST00000420103 ACSBG1Q96GR2 724 aa16.83■□□□□ 0.28
CHCHD4-203ENST00000420103 SGIP1Q9BQI5 828 aa16.83■□□□□ 0.28
CHCHD4-203ENST00000420103 KCNH5Q8NCM2 988 aa16.82■□□□□ 0.28
CHCHD4-203ENST00000420103 ZNF692Q9BU19 519 aaPredicted RBP16.82■□□□□ 0.28
CHCHD4-203ENST00000420103 CDCA7Q9BWT1 371 aaPredicted RBP16.82■□□□□ 0.28
CHCHD4-203ENST00000420103 GOLGB1Q14789 3259 aaKnown RBP16.82■□□□□ 0.28
CHCHD4-203ENST00000420103 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.81■□□□□ 0.28
CHCHD4-203ENST00000420103 FHDC1Q9C0D6 1143 aaPredicted RBP16.81■□□□□ 0.28
CHCHD4-203ENST00000420103 AKAP12Q02952 1782 aa16.81■□□□□ 0.28
CHCHD4-203ENST00000420103 ROCK2O75116 1388 aaKnown RBP16.8■□□□□ 0.28
CHCHD4-203ENST00000420103 KTN1Q86UP2 1357 aaKnown RBP16.8■□□□□ 0.28
CHCHD4-203ENST00000420103 TTC21AQ8NDW8 1320 aa16.8■□□□□ 0.28
CHCHD4-203ENST00000420103 NME9Q86XW9 330 aa16.8■□□□□ 0.28
CHCHD4-203ENST00000420103 SYT17Q9BSW7 474 aa16.8■□□□□ 0.28
CHCHD4-203ENST00000420103 STK32BQ9NY57 414 aa16.8■□□□□ 0.28
CHCHD4-203ENST00000420103 CD163L1Q9NR16 1453 aa16.8■□□□□ 0.28
CHCHD4-203ENST00000420103 TNS2Q63HR2 1409 aa16.79■□□□□ 0.28
CHCHD4-203ENST00000420103 ZNF827Q17R98 1081 aa16.78■□□□□ 0.28
CHCHD4-203ENST00000420103 ZNF784Q8NCA9 323 aaPredicted RBP16.78■□□□□ 0.28
CHCHD4-203ENST00000420103 LRRC4BQ9NT99 713 aa16.78■□□□□ 0.28
CHCHD4-203ENST00000420103 CCDC7Q96M83 1385 aa16.77■□□□□ 0.28
CHCHD4-203ENST00000420103 SBNO2Q9Y2G9 1366 aa16.77■□□□□ 0.28
CHCHD4-203ENST00000420103 ERBB3P21860 1342 aa16.77■□□□□ 0.28
CHCHD4-203ENST00000420103 USP31Q70CQ4 1352 aa16.77■□□□□ 0.27
CHCHD4-203ENST00000420103 DCAF8L1A6NGE4 600 aa16.76■□□□□ 0.27
CHCHD4-203ENST00000420103 MTFR1LQ9H019 292 aa16.76■□□□□ 0.27
CHCHD4-203ENST00000420103 NLRP2Q9NX02 1062 aa16.76■□□□□ 0.27
CHCHD4-203ENST00000420103 PAPPAQ13219 1627 aa16.75■□□□□ 0.27
CHCHD4-203ENST00000420103 SLC12A5Q9H2X9 1139 aa16.75■□□□□ 0.27
CHCHD4-203ENST00000420103 NHSQ6T4R5 1651 aa16.75■□□□□ 0.27
CHCHD4-203ENST00000420103 ANKRD24Q8TF21 1146 aa16.74■□□□□ 0.27
CHCHD4-203ENST00000420103 MON2Q7Z3U7 1717 aa16.73■□□□□ 0.27
CHCHD4-203ENST00000420103 KCNQ4P56696 695 aa16.73■□□□□ 0.27
CHCHD4-203ENST00000420103 ABCC6O95255 1503 aa16.73■□□□□ 0.27
CHCHD4-203ENST00000420103 IL2RBP14784 551 aa16.72■□□□□ 0.27
CHCHD4-203ENST00000420103 FBLN1P23142 703 aa16.72■□□□□ 0.27
CHCHD4-203ENST00000420103 TMC1Q8TDI8 760 aa16.71■□□□□ 0.27
CHCHD4-203ENST00000420103 ARXQ96QS3 562 aa16.71■□□□□ 0.27
CHCHD4-203ENST00000420103 AKT1S1Q96B36 256 aa16.7■□□□□ 0.26
CHCHD4-203ENST00000420103 BTAF1O14981 1849 aa16.7■□□□□ 0.26
CHCHD4-203ENST00000420103 USP54Q70EL1 1684 aa16.69■□□□□ 0.26
CHCHD4-203ENST00000420103 DDX54Q8TDD1 881 aaKnown RBP16.68■□□□□ 0.26
CHCHD4-203ENST00000420103 LTV1Q96GA3 475 aaPredicted RBP16.68■□□□□ 0.26
CHCHD4-203ENST00000420103 LTN1O94822 1766 aa16.68■□□□□ 0.26
CHCHD4-203ENST00000420103 A0A1W2PP64 1363 aa16.67■□□□□ 0.26
CHCHD4-203ENST00000420103 TONSLQ96HA7 1378 aa16.67■□□□□ 0.26
CHCHD4-203ENST00000420103 CARD11Q9BXL7 1154 aa16.66■□□□□ 0.26
CHCHD4-203ENST00000420103 PNPLA7Q6ZV29 1317 aa16.66■□□□□ 0.26
CHCHD4-203ENST00000420103 IP6K1Q92551 441 aa16.65■□□□□ 0.26
CHCHD4-203ENST00000420103 NSD2O96028 1365 aa16.64■□□□□ 0.26
CHCHD4-203ENST00000420103 MAP3K5Q99683 1374 aa16.64■□□□□ 0.26
CHCHD4-203ENST00000420103 EDC4Q6P2E9 1401 aaKnown RBP16.64■□□□□ 0.25
CHCHD4-203ENST00000420103 PRIM1P49642 420 aaKnown RBP16.64■□□□□ 0.25
CHCHD4-203ENST00000420103 NLGN2Q8NFZ4 835 aa16.64■□□□□ 0.25
CHCHD4-203ENST00000420103 HDGFL2Q7Z4V5 671 aaPredicted RBP16.63■□□□□ 0.25
CHCHD4-203ENST00000420103 CEP350Q5VT06 3117 aa16.63■□□□□ 0.25
CHCHD4-203ENST00000420103 C1QTNF8P60827 252 aa16.62■□□□□ 0.25
CHCHD4-203ENST00000420103 KLHL34Q8N239 644 aa16.62■□□□□ 0.25
CHCHD4-203ENST00000420103 MAP3K19Q56UN5 1328 aa16.62■□□□□ 0.25
CHCHD4-203ENST00000420103 GPR162Q16538 588 aa16.61■□□□□ 0.25
CHCHD4-203ENST00000420103 SYTL4Q96C24 671 aaPredicted RBP16.61■□□□□ 0.25
CHCHD4-203ENST00000420103 KAT6BQ8WYB5 2073 aa16.61■□□□□ 0.25
CHCHD4-203ENST00000420103 HOXC9P31274 260 aa16.6■□□□□ 0.25
CHCHD4-203ENST00000420103 SLC27A3Q5K4L6 730 aa16.6■□□□□ 0.25
CHCHD4-203ENST00000420103 TESK2Q96S53 571 aa16.6■□□□□ 0.25
CHCHD4-203ENST00000420103 MEGF6O75095 1541 aa16.6■□□□□ 0.25
CHCHD4-203ENST00000420103 TUBGCP6Q96RT7 1819 aa16.59■□□□□ 0.25
CHCHD4-203ENST00000420103 SENP3-EIF4A1A0A087X0R7 540 aa16.59■□□□□ 0.25
CHCHD4-203ENST00000420103 TERF2IPQ9NYB0 399 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms