RNA–Protein interactions for RNA: ENST00000419314.5

CCT6P3-201, Transcript of chaperonin containing TCP1 subunit 6 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CCT6P3, Length 3,702 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6P3-201ENST00000419314 SIRT1Q96EB6 747 aa17.52■□□□□ 0.4
CCT6P3-201ENST00000419314 PHF8Q9UPP1 1060 aa17.52■□□□□ 0.4
CCT6P3-201ENST00000419314 USHBP1Q8N6Y0 703 aa17.51■□□□□ 0.39
CCT6P3-201ENST00000419314 PDZRN3Q9UPQ7 1066 aa17.51■□□□□ 0.39
CCT6P3-201ENST00000419314 PLEKHG1Q9ULL1 1385 aa17.51■□□□□ 0.39
CCT6P3-201ENST00000419314 MBIPQ9NS73 344 aa17.51■□□□□ 0.39
CCT6P3-201ENST00000419314 TSPYL4Q9UJ04 414 aa17.51■□□□□ 0.39
CCT6P3-201ENST00000419314 ARHGEF28Q8N1W1 1705 aaKnown RBP17.5■□□□□ 0.39
CCT6P3-201ENST00000419314 DDRGK1Q96HY6 314 aa17.5■□□□□ 0.39
CCT6P3-201ENST00000419314 CT47B1P0C2W7 299 aaPredicted RBP17.49■□□□□ 0.39
CCT6P3-201ENST00000419314 SPATA31D1Q6ZQQ2 1576 aa17.49■□□□□ 0.39
CCT6P3-201ENST00000419314 PLEKHG3A1L390 1219 aa17.49■□□□□ 0.39
CCT6P3-201ENST00000419314 MAP3K19Q56UN5 1328 aa17.49■□□□□ 0.39
CCT6P3-201ENST00000419314 KRT24Q2M2I5 525 aa17.49■□□□□ 0.39
CCT6P3-201ENST00000419314 C8orf58Q8NAV2 365 aa17.47■□□□□ 0.39
CCT6P3-201ENST00000419314 LNPKQ9C0E8 428 aa17.47■□□□□ 0.39
CCT6P3-201ENST00000419314 MYO3AQ8NEV4 1616 aa17.47■□□□□ 0.39
CCT6P3-201ENST00000419314 HAP1P54257 671 aaPredicted RBP17.46■□□□□ 0.39
CCT6P3-201ENST00000419314 ANKRD45Q5TZF3 282 aa17.46■□□□□ 0.39
CCT6P3-201ENST00000419314 IFT57Q9NWB7 429 aa17.46■□□□□ 0.39
CCT6P3-201ENST00000419314 IL16Q14005 1332 aa17.46■□□□□ 0.39
CCT6P3-201ENST00000419314 ATP7BP35670 1465 aa17.46■□□□□ 0.39
CCT6P3-201ENST00000419314 FAM135BQ49AJ0 1406 aa17.46■□□□□ 0.39
CCT6P3-201ENST00000419314 PHF23Q9BUL5 403 aaPredicted RBP17.45■□□□□ 0.38
CCT6P3-201ENST00000419314 CHMP4BQ9H444 224 aaKnown RBP17.45■□□□□ 0.38
CCT6P3-201ENST00000419314 CFAP44Q96MT7 982 aa17.45■□□□□ 0.38
CCT6P3-201ENST00000419314 STK31Q9BXU1 1019 aa17.45■□□□□ 0.38
CCT6P3-201ENST00000419314 KDM2BQ8NHM5 1336 aa17.45■□□□□ 0.38
CCT6P3-201ENST00000419314 NLRP1Q9C000 1473 aa17.44■□□□□ 0.38
CCT6P3-201ENST00000419314 ADAMTS13Q76LX8 1427 aa17.44■□□□□ 0.38
CCT6P3-201ENST00000419314 CSB-PGBD3P0DP91 1061 aa17.44■□□□□ 0.38
CCT6P3-201ENST00000419314 CD163L1Q9NR16 1453 aa17.44■□□□□ 0.38
CCT6P3-201ENST00000419314 EIF2S2P20042 333 aaKnown RBP17.43■□□□□ 0.38
CCT6P3-201ENST00000419314 API5Q9BZZ5 524 aaKnown RBP17.43■□□□□ 0.38
CCT6P3-201ENST00000419314 VAMP4O75379 141 aa17.43■□□□□ 0.38
CCT6P3-201ENST00000419314 MFAP1P55081 439 aaKnown RBP17.43■□□□□ 0.38
CCT6P3-201ENST00000419314 ATF3P18847 181 aa17.42■□□□□ 0.38
CCT6P3-201ENST00000419314 EYA1Q99502 592 aa17.42■□□□□ 0.38
CCT6P3-201ENST00000419314 TTC21AQ8NDW8 1320 aa17.42■□□□□ 0.38
CCT6P3-201ENST00000419314 SLC4A2P04920 1241 aa17.42■□□□□ 0.38
CCT6P3-201ENST00000419314 GAS2L2Q8NHY3 880 aa17.42■□□□□ 0.38
CCT6P3-201ENST00000419314 ZC3H6P61129 1189 aaKnown RBP17.42■□□□□ 0.38
CCT6P3-201ENST00000419314 ORAI2Q96SN7 254 aa17.41■□□□□ 0.38
CCT6P3-201ENST00000419314 SPRYD3Q8NCJ5 442 aa17.41■□□□□ 0.38
CCT6P3-201ENST00000419314 MTHFSDQ2M296 383 aaKnown RBP17.41■□□□□ 0.38
CCT6P3-201ENST00000419314 ALDH1L2Q3SY69 923 aa17.4■□□□□ 0.38
CCT6P3-201ENST00000419314 AAMPQ13685 434 aa17.4■□□□□ 0.38
CCT6P3-201ENST00000419314 CPSF1Q10570 1443 aaKnown RBP17.4■□□□□ 0.38
CCT6P3-201ENST00000419314 HSPA2P54652 639 aa17.39■□□□□ 0.37
CCT6P3-201ENST00000419314 REREQ9P2R6 1566 aa17.39■□□□□ 0.37
CCT6P3-201ENST00000419314 PNPLA6Q8IY17 1366 aa17.38■□□□□ 0.37
CCT6P3-201ENST00000419314 PTPRUQ92729 1446 aa17.38■□□□□ 0.37
CCT6P3-201ENST00000419314 TEFQ10587 303 aa17.38■□□□□ 0.37
CCT6P3-201ENST00000419314 FKBP5Q13451 457 aaPredicted RBP17.38■□□□□ 0.37
CCT6P3-201ENST00000419314 CPS1P31327 1500 aa17.38■□□□□ 0.37
CCT6P3-201ENST00000419314 KIF13AQ9H1H9 1805 aa17.38■□□□□ 0.37
CCT6P3-201ENST00000419314 USP6P35125 1406 aa17.37■□□□□ 0.37
CCT6P3-201ENST00000419314 DLC1Q96QB1 1528 aa17.37■□□□□ 0.37
CCT6P3-201ENST00000419314 MRPL50Q8N5N7 158 aaKnown RBP17.36■□□□□ 0.37
CCT6P3-201ENST00000419314 AATKQ6ZMQ8 1374 aa17.36■□□□□ 0.37
CCT6P3-201ENST00000419314 FLT4P35916 1363 aa17.36■□□□□ 0.37
CCT6P3-201ENST00000419314 BECN1Q14457 450 aa17.36■□□□□ 0.37
CCT6P3-201ENST00000419314 ZNF428Q96B54 188 aa17.36■□□□□ 0.37
CCT6P3-201ENST00000419314 NLRP2Q9NX02 1062 aa17.36■□□□□ 0.37
CCT6P3-201ENST00000419314 F6X3S4 739 aa17.35■□□□□ 0.37
CCT6P3-201ENST00000419314 HOXC9P31274 260 aa17.35■□□□□ 0.37
CCT6P3-201ENST00000419314 SLKQ9H2G2 1235 aaPredicted RBP17.35■□□□□ 0.37
CCT6P3-201ENST00000419314 GNAT3A8MTJ3 354 aa17.35■□□□□ 0.37
CCT6P3-201ENST00000419314 LRRC59Q96AG4 307 aaKnown RBP17.35■□□□□ 0.37
CCT6P3-201ENST00000419314 C1orf141Q5JVX7 400 aa17.34■□□□□ 0.37
CCT6P3-201ENST00000419314 C8orf34Q49A92 452 aa17.34■□□□□ 0.37
CCT6P3-201ENST00000419314 NCBP3Q53F19 620 aaKnown RBP17.34■□□□□ 0.37
CCT6P3-201ENST00000419314 ZNF530Q6P9A1 599 aaPredicted RBP17.33■□□□□ 0.37
CCT6P3-201ENST00000419314 KRT28Q7Z3Y7 464 aa17.33■□□□□ 0.36
CCT6P3-201ENST00000419314 HSP90AA1P07900 732 aaKnown RBP17.33■□□□□ 0.36
CCT6P3-201ENST00000419314 DDX17Q92841 729 aaKnown RBP17.33■□□□□ 0.36
CCT6P3-201ENST00000419314 MED14O60244 1454 aa17.32■□□□□ 0.36
CCT6P3-201ENST00000419314 A0A0G2JS52 829 aa17.31■□□□□ 0.36
CCT6P3-201ENST00000419314 ZBTB40Q9NUA8 1239 aa17.31■□□□□ 0.36
CCT6P3-201ENST00000419314 IQSEC2Q5JU85 1478 aa17.31■□□□□ 0.36
CCT6P3-201ENST00000419314 TECPR2O15040 1411 aa17.3■□□□□ 0.36
CCT6P3-201ENST00000419314 MPRIPQ6WCQ1 1025 aa17.3■□□□□ 0.36
CCT6P3-201ENST00000419314 KCNH5Q8NCM2 988 aa17.3■□□□□ 0.36
CCT6P3-201ENST00000419314 SEC24BO95487 1268 aa17.3■□□□□ 0.36
CCT6P3-201ENST00000419314 SBNO1A3KN83 1393 aa17.29■□□□□ 0.36
CCT6P3-201ENST00000419314 HDGFL1Q5TGJ6 251 aa17.29■□□□□ 0.36
CCT6P3-201ENST00000419314 CABLES1Q8TDN4 633 aa17.29■□□□□ 0.36
CCT6P3-201ENST00000419314 GCP02774 474 aa17.28■□□□□ 0.36
CCT6P3-201ENST00000419314 LRRC7Q96NW7 1537 aa17.28■□□□□ 0.36
CCT6P3-201ENST00000419314 CDK12Q9NYV4 1490 aaPredicted RBP17.28■□□□□ 0.36
CCT6P3-201ENST00000419314 CHL1O00533 1208 aa17.28■□□□□ 0.36
CCT6P3-201ENST00000419314 PLEKHO1Q53GL0 409 aaPredicted RBP17.28■□□□□ 0.36
CCT6P3-201ENST00000419314 CCDC30Q5VVM6 783 aa17.28■□□□□ 0.36
CCT6P3-201ENST00000419314 CHD1LQ86WJ1 897 aa17.28■□□□□ 0.36
CCT6P3-201ENST00000419314 RAPGEF4Q8WZA2 1011 aa17.27■□□□□ 0.36
CCT6P3-201ENST00000419314 TAF7Q15545 349 aaPredicted RBP17.27■□□□□ 0.35
CCT6P3-201ENST00000419314 COL3A1P02461 1466 aaPredicted RBP17.26■□□□□ 0.35
CCT6P3-201ENST00000419314 CHRNA2Q15822 529 aa17.26■□□□□ 0.35
CCT6P3-201ENST00000419314 NBPF6Q5VWK0 638 aa17.26■□□□□ 0.35
CCT6P3-201ENST00000419314 G2E3Q7L622 706 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms