RNA–Protein interactions for RNA: ENST00000418653.5

SNAP47-204, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SNAP47, Length 1,867 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-204ENST00000418653 TXNRD1Q16881 649 aa16.88■□□□□ 0.29
SNAP47-204ENST00000418653 POLR3AO14802 1390 aaPredicted RBP16.88■□□□□ 0.29
SNAP47-204ENST00000418653 HSPA6P17066 643 aa16.88■□□□□ 0.29
SNAP47-204ENST00000418653 DDB1Q16531 1140 aa16.88■□□□□ 0.29
SNAP47-204ENST00000418653 DIEXFQ68CQ4 756 aaKnown RBP16.88■□□□□ 0.29
SNAP47-204ENST00000418653 NHSQ6T4R5 1651 aa16.87■□□□□ 0.29
SNAP47-204ENST00000418653 CDCA7Q9BWT1 371 aaPredicted RBP16.87■□□□□ 0.29
SNAP47-204ENST00000418653 CFAP70Q5T0N1 1121 aa16.86■□□□□ 0.29
SNAP47-204ENST00000418653 GRIN3BO60391 1043 aa16.83■□□□□ 0.28
SNAP47-204ENST00000418653 ATP10DQ9P241 1426 aa16.83■□□□□ 0.28
SNAP47-204ENST00000418653 SLC16A10Q8TF71 515 aa16.82■□□□□ 0.28
SNAP47-204ENST00000418653 BRD4O60885 1362 aaPredicted RBP16.82■□□□□ 0.28
SNAP47-204ENST00000418653 ARHGEF28Q8N1W1 1705 aaKnown RBP16.82■□□□□ 0.28
SNAP47-204ENST00000418653 MINK1Q8N4C8 1332 aaPredicted RBP16.82■□□□□ 0.28
SNAP47-204ENST00000418653 ZNF316A6NFI3 1004 aaPredicted RBP16.82■□□□□ 0.28
SNAP47-204ENST00000418653 HIRIP3Q9BW71 556 aaPredicted RBP16.82■□□□□ 0.28
SNAP47-204ENST00000418653 PTF1AQ7RTS3 328 aa16.81■□□□□ 0.28
SNAP47-204ENST00000418653 SLIT3O75094 1523 aa16.8■□□□□ 0.28
SNAP47-204ENST00000418653 COL18A1P39060 1754 aa16.8■□□□□ 0.28
SNAP47-204ENST00000418653 MARCH10Q8NA82 808 aaPredicted RBP16.8■□□□□ 0.28
SNAP47-204ENST00000418653 TRPM1Q7Z4N2 1603 aa16.79■□□□□ 0.28
SNAP47-204ENST00000418653 NUDT16Q96DE0 195 aaKnown RBP16.79■□□□□ 0.28
SNAP47-204ENST00000418653 ADCY9O60503 1353 aa16.79■□□□□ 0.28
SNAP47-204ENST00000418653 POLD1P28340 1107 aa16.78■□□□□ 0.28
SNAP47-204ENST00000418653 NLRP13Q86W25 1043 aa16.78■□□□□ 0.28
SNAP47-204ENST00000418653 GCP02774 474 aa16.77■□□□□ 0.27
SNAP47-204ENST00000418653 NUTM2GQ5VZR2 741 aa16.77■□□□□ 0.27
SNAP47-204ENST00000418653 TNS2Q63HR2 1409 aa16.77■□□□□ 0.27
SNAP47-204ENST00000418653 ABCC6O95255 1503 aa16.77■□□□□ 0.27
SNAP47-204ENST00000418653 PLEKHG3A1L390 1219 aa16.76■□□□□ 0.27
SNAP47-204ENST00000418653 CENPBP07199 599 aaPredicted RBP16.76■□□□□ 0.27
SNAP47-204ENST00000418653 ABTB2Q8N961 1025 aa16.76■□□□□ 0.27
SNAP47-204ENST00000418653 WDR17Q8IZU2 1322 aa16.76■□□□□ 0.27
SNAP47-204ENST00000418653 GPBP1L1Q9HC44 474 aaPredicted RBP16.76■□□□□ 0.27
SNAP47-204ENST00000418653 TRAK1Q9UPV9 953 aa16.76■□□□□ 0.27
SNAP47-204ENST00000418653 ACEP12821 1306 aa16.75■□□□□ 0.27
SNAP47-204ENST00000418653 BTAF1O14981 1849 aa16.75■□□□□ 0.27
SNAP47-204ENST00000418653 TOM1L2Q6ZVM7 507 aa16.73■□□□□ 0.27
SNAP47-204ENST00000418653 CLSPNQ9HAW4 1339 aa16.73■□□□□ 0.27
SNAP47-204ENST00000418653 PELP1Q8IZL8 1130 aaKnown RBP16.73■□□□□ 0.27
SNAP47-204ENST00000418653 CCDC61Q9Y6R9 512 aa16.73■□□□□ 0.27
SNAP47-204ENST00000418653 TUBGCP6Q96RT7 1819 aa16.72■□□□□ 0.27
SNAP47-204ENST00000418653 CCDC7Q96M83 1385 aa16.71■□□□□ 0.27
SNAP47-204ENST00000418653 APLP1P51693 650 aa16.71■□□□□ 0.27
SNAP47-204ENST00000418653 ZNF827Q17R98 1081 aa16.7■□□□□ 0.26
SNAP47-204ENST00000418653 MPHOSPH9Q99550 1183 aa16.7■□□□□ 0.26
SNAP47-204ENST00000418653 CARD10Q9BWT7 1032 aa16.7■□□□□ 0.26
SNAP47-204ENST00000418653 YBX3P16989 372 aaKnown RBP eCLIP16.69■□□□□ 0.26
SNAP47-204ENST00000418653 CPSF1Q10570 1443 aaKnown RBP16.69■□□□□ 0.26
SNAP47-204ENST00000418653 NLGN2Q8NFZ4 835 aa16.69■□□□□ 0.26
SNAP47-204ENST00000418653 AKT1S1Q96B36 256 aa16.69■□□□□ 0.26
SNAP47-204ENST00000418653 EXOC5O00471 708 aa16.68■□□□□ 0.26
SNAP47-204ENST00000418653 KLHL34Q8N239 644 aa16.68■□□□□ 0.26
SNAP47-204ENST00000418653 STAC3Q96MF2 364 aa16.68■□□□□ 0.26
SNAP47-204ENST00000418653 USP6P35125 1406 aa16.67■□□□□ 0.26
SNAP47-204ENST00000418653 QRICH2Q9H0J4 1663 aa16.67■□□□□ 0.26
SNAP47-204ENST00000418653 SLC27A3Q5K4L6 730 aa16.67■□□□□ 0.26
SNAP47-204ENST00000418653 CDK19Q9BWU1 502 aa16.66■□□□□ 0.26
SNAP47-204ENST00000418653 RGPD5Q99666 1765 aa16.66■□□□□ 0.26
SNAP47-204ENST00000418653 PNPLA7Q6ZV29 1317 aa16.65■□□□□ 0.26
SNAP47-204ENST00000418653 PPIP5K1Q6PFW1 1433 aa16.65■□□□□ 0.26
SNAP47-204ENST00000418653 PIK3C2AO00443 1686 aa16.65■□□□□ 0.26
SNAP47-204ENST00000418653 PRELPP51888 382 aa16.64■□□□□ 0.25
SNAP47-204ENST00000418653 WDR90Q96KV7 1748 aa16.64■□□□□ 0.25
SNAP47-204ENST00000418653 GOLGB1Q14789 3259 aaKnown RBP16.63■□□□□ 0.25
SNAP47-204ENST00000418653 DNAJC5GQ8N7S2 189 aa16.63■□□□□ 0.25
SNAP47-204ENST00000418653 LY75O60449 1722 aa16.62■□□□□ 0.25
SNAP47-204ENST00000418653 CICQ96RK0 1608 aaPredicted RBP16.62■□□□□ 0.25
SNAP47-204ENST00000418653 LRRC4BQ9NT99 713 aa16.62■□□□□ 0.25
SNAP47-204ENST00000418653 KIF3CO14782 793 aa16.61■□□□□ 0.25
SNAP47-204ENST00000418653 KIAA1210Q9ULL0 1709 aa16.6■□□□□ 0.25
SNAP47-204ENST00000418653 AXIN2Q9Y2T1 843 aa16.6■□□□□ 0.25
SNAP47-204ENST00000418653 CD2APQ9Y5K6 639 aa16.6■□□□□ 0.25
SNAP47-204ENST00000418653 NLRP6P59044 892 aa16.59■□□□□ 0.25
SNAP47-204ENST00000418653 ARHGEF25Q86VW2 580 aa16.59■□□□□ 0.25
SNAP47-204ENST00000418653 ZBTB7CA1YPR0 619 aa16.59■□□□□ 0.25
SNAP47-204ENST00000418653 KCNH5Q8NCM2 988 aa16.59■□□□□ 0.25
SNAP47-204ENST00000418653 JMYQ8N9B5 988 aa16.58■□□□□ 0.24
SNAP47-204ENST00000418653 NFAT5O94916 1531 aa16.58■□□□□ 0.24
SNAP47-204ENST00000418653 SLC34A2O95436 690 aa16.57■□□□□ 0.24
SNAP47-204ENST00000418653 CSB-PGBD3P0DP91 1061 aa16.57■□□□□ 0.24
SNAP47-204ENST00000418653 ACSBG1Q96GR2 724 aa16.56■□□□□ 0.24
SNAP47-204ENST00000418653 TFCP2L1Q9NZI6 479 aa16.56■□□□□ 0.24
SNAP47-204ENST00000418653 TOMM70O94826 608 aa16.55■□□□□ 0.24
SNAP47-204ENST00000418653 NEUROD1Q13562 356 aa16.55■□□□□ 0.24
SNAP47-204ENST00000418653 COL13A1Q5TAT6 717 aaPredicted RBP16.55■□□□□ 0.24
SNAP47-204ENST00000418653 TNS4Q8IZW8 715 aa16.54■□□□□ 0.24
SNAP47-204ENST00000418653 ZNF526Q8TF50 670 aaPredicted RBP16.54■□□□□ 0.24
SNAP47-204ENST00000418653 KAT6BQ8WYB5 2073 aa16.54■□□□□ 0.24
SNAP47-204ENST00000418653 USP54Q70EL1 1684 aa16.54■□□□□ 0.24
SNAP47-204ENST00000418653 HMGB2P26583 209 aaKnown RBP16.53■□□□□ 0.24
SNAP47-204ENST00000418653 KLRG1Q96E93 195 aa16.52■□□□□ 0.24
SNAP47-204ENST00000418653 IL2RBP14784 551 aa16.51■□□□□ 0.23
SNAP47-204ENST00000418653 FAM208AQ9UK61 1670 aaKnown RBP16.51■□□□□ 0.23
SNAP47-204ENST00000418653 CAPN15O75808 1086 aa16.5■□□□□ 0.23
SNAP47-204ENST00000418653 DOT1LQ8TEK3 1739 aa16.5■□□□□ 0.23
SNAP47-204ENST00000418653 SRPK2P78362 688 aaKnown RBP16.49■□□□□ 0.23
SNAP47-204ENST00000418653 ERBB3P21860 1342 aa16.49■□□□□ 0.23
SNAP47-204ENST00000418653 DCAF11Q8TEB1 546 aa16.48■□□□□ 0.23
SNAP47-204ENST00000418653 TTC21AQ8NDW8 1320 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms