RNA–Protein interactions for RNA: ENST00000417539.1

AC078883.3-202, humanhuman

TSL 3 BASIC

Gene AC078883.3, Length 754 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078883.3-202ENST00000417539 PMFBP1Q8TBY8 1022 aa13.16□□□□□ -0.3
AC078883.3-202ENST00000417539 SALL2Q9Y467 1007 aaPredicted RBP13.16□□□□□ -0.3
AC078883.3-202ENST00000417539 SPATA31A3Q5VYP0 1347 aa13.15□□□□□ -0.3
AC078883.3-202ENST00000417539 EDC4Q6P2E9 1401 aaKnown RBP13.15□□□□□ -0.3
AC078883.3-202ENST00000417539 PPIP5K1Q6PFW1 1433 aa13.15□□□□□ -0.3
AC078883.3-202ENST00000417539 AKAP12Q02952 1782 aa13.15□□□□□ -0.3
AC078883.3-202ENST00000417539 IRX6P78412 446 aaPredicted RBP13.15□□□□□ -0.3
AC078883.3-202ENST00000417539 KRT28Q7Z3Y7 464 aa13.15□□□□□ -0.3
AC078883.3-202ENST00000417539 RCAN3Q9UKA8 241 aa13.15□□□□□ -0.3
AC078883.3-202ENST00000417539 CCDC61Q9Y6R9 512 aa13.15□□□□□ -0.3
AC078883.3-202ENST00000417539 KIF20BQ96Q89 1820 aa13.14□□□□□ -0.31
AC078883.3-202ENST00000417539 PRKAR2AP13861 404 aaKnown RBP13.14□□□□□ -0.31
AC078883.3-202ENST00000417539 TNNT2P45379 298 aaPredicted RBP13.14□□□□□ -0.31
AC078883.3-202ENST00000417539 GOLGA2Q08379 1002 aa13.14□□□□□ -0.31
AC078883.3-202ENST00000417539 SPDYE1Q8NFV5 336 aaPredicted RBP13.14□□□□□ -0.31
AC078883.3-202ENST00000417539 CDCA7LQ96GN5 454 aa13.14□□□□□ -0.31
AC078883.3-202ENST00000417539 GGNBP2Q9H3C7 697 aa13.14□□□□□ -0.31
AC078883.3-202ENST00000417539 CLEC11AQ9Y240 323 aa13.14□□□□□ -0.31
AC078883.3-202ENST00000417539 SBNO1A3KN83 1393 aa13.14□□□□□ -0.31
AC078883.3-202ENST00000417539 TNS3Q68CZ2 1445 aa13.13□□□□□ -0.31
AC078883.3-202ENST00000417539 PLEKHG3A1L390 1219 aa13.13□□□□□ -0.31
AC078883.3-202ENST00000417539 RUNDC1Q96C34 613 aa13.13□□□□□ -0.31
AC078883.3-202ENST00000417539 ZNF692Q9BU19 519 aaPredicted RBP13.13□□□□□ -0.31
AC078883.3-202ENST00000417539 APAF1O14727 1248 aa13.12□□□□□ -0.31
AC078883.3-202ENST00000417539 RRP1P56182 461 aaKnown RBP13.12□□□□□ -0.31
AC078883.3-202ENST00000417539 CCDC146Q8IYE0 955 aa13.12□□□□□ -0.31
AC078883.3-202ENST00000417539 COL3A1P02461 1466 aaPredicted RBP13.11□□□□□ -0.31
AC078883.3-202ENST00000417539 SLFN5Q08AF3 891 aa13.11□□□□□ -0.31
AC078883.3-202ENST00000417539 MKRN4PQ13434 485 aaPredicted RBP13.11□□□□□ -0.31
AC078883.3-202ENST00000417539 TRMT2AQ8IZ69 625 aaKnown RBP13.11□□□□□ -0.31
AC078883.3-202ENST00000417539 MON2Q7Z3U7 1717 aa13.1□□□□□ -0.31
AC078883.3-202ENST00000417539 NUTM2BA6NNL0 878 aaPredicted RBP13.1□□□□□ -0.31
AC078883.3-202ENST00000417539 NUTM2EB1AL46 878 aaPredicted RBP13.1□□□□□ -0.31
AC078883.3-202ENST00000417539 PSME1Q06323 249 aa13.1□□□□□ -0.31
AC078883.3-202ENST00000417539 DUSP27Q5VZP5 1158 aa13.1□□□□□ -0.31
AC078883.3-202ENST00000417539 POTEAQ6S8J7 498 aa13.1□□□□□ -0.31
AC078883.3-202ENST00000417539 NUTM2AQ8IVF1 878 aaPredicted RBP13.1□□□□□ -0.31
AC078883.3-202ENST00000417539 ACEP12821 1306 aa13.1□□□□□ -0.31
AC078883.3-202ENST00000417539 E9PSI1 815 aa13.09□□□□□ -0.31
AC078883.3-202ENST00000417539 NRKQ7Z2Y5 1582 aa13.09□□□□□ -0.31
AC078883.3-202ENST00000417539 PHRF1Q9P1Y6 1649 aaKnown RBP13.09□□□□□ -0.31
AC078883.3-202ENST00000417539 SSH2Q76I76 1423 aa13.08□□□□□ -0.32
AC078883.3-202ENST00000417539 CCDC27Q2M243 656 aa13.08□□□□□ -0.32
AC078883.3-202ENST00000417539 NGDNQ8NEJ9 315 aaKnown RBP13.08□□□□□ -0.32
AC078883.3-202ENST00000417539 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.08□□□□□ -0.32
AC078883.3-202ENST00000417539 AATKQ6ZMQ8 1374 aa13.07□□□□□ -0.32
AC078883.3-202ENST00000417539 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.07□□□□□ -0.32
AC078883.3-202ENST00000417539 ARHGEF10O15013 1369 aa13.07□□□□□ -0.32
AC078883.3-202ENST00000417539 PIK3C2AO00443 1686 aa13.06□□□□□ -0.32
AC078883.3-202ENST00000417539 PLCH1Q4KWH8 1693 aa13.06□□□□□ -0.32
AC078883.3-202ENST00000417539 U2AF1L5P0DN76 240 aaPredicted RBP13.06□□□□□ -0.32
AC078883.3-202ENST00000417539 U2AF1Q01081 240 aaKnown RBP eCLIP13.06□□□□□ -0.32
AC078883.3-202ENST00000417539 PNNQ9H307 717 aaKnown RBP13.06□□□□□ -0.32
AC078883.3-202ENST00000417539 NWD2Q9ULI1 1742 aa13.05□□□□□ -0.32
AC078883.3-202ENST00000417539 DIAPH1O60610 1272 aaKnown RBP13.05□□□□□ -0.32
AC078883.3-202ENST00000417539 WDR63Q8IWG1 891 aa13.05□□□□□ -0.32
AC078883.3-202ENST00000417539 WWC1Q8IX03 1113 aa13.05□□□□□ -0.32
AC078883.3-202ENST00000417539 TCP11L2Q8N4U5 519 aa13.05□□□□□ -0.32
AC078883.3-202ENST00000417539 CABLES1Q8TDN4 633 aa13.05□□□□□ -0.32
AC078883.3-202ENST00000417539 SSUH2Q9Y2M2 353 aa13.05□□□□□ -0.32
AC078883.3-202ENST00000417539 AFF2P51816 1311 aa13.05□□□□□ -0.32
AC078883.3-202ENST00000417539 USP6P35125 1406 aa13.05□□□□□ -0.32
AC078883.3-202ENST00000417539 ADAMTS2O95450 1211 aa13.04□□□□□ -0.32
AC078883.3-202ENST00000417539 MEX3CQ5U5Q3 659 aaKnown RBP13.04□□□□□ -0.32
AC078883.3-202ENST00000417539 FNBP4Q8N3X1 1017 aaPredicted RBP13.04□□□□□ -0.32
AC078883.3-202ENST00000417539 COG3Q96JB2 828 aa13.04□□□□□ -0.32
AC078883.3-202ENST00000417539 POLKQ9UBT6 870 aa13.04□□□□□ -0.32
AC078883.3-202ENST00000417539 NRAPQ86VF7 1730 aa13.04□□□□□ -0.32
AC078883.3-202ENST00000417539 BCL9LQ86UU0 1499 aa13.04□□□□□ -0.32
AC078883.3-202ENST00000417539 SLIT2O94813 1529 aa13.03□□□□□ -0.32
AC078883.3-202ENST00000417539 USP54Q70EL1 1684 aa13.03□□□□□ -0.32
AC078883.3-202ENST00000417539 C19orf67A6NJJ6 358 aa13.03□□□□□ -0.32
AC078883.3-202ENST00000417539 NME9Q86XW9 330 aa13.03□□□□□ -0.32
AC078883.3-202ENST00000417539 C8orf37Q96NL8 207 aa13.03□□□□□ -0.32
AC078883.3-202ENST00000417539 CDK12Q9NYV4 1490 aaPredicted RBP13.03□□□□□ -0.32
AC078883.3-202ENST00000417539 PLEKHF1Q96S99 279 aa13.02□□□□□ -0.33
AC078883.3-202ENST00000417539 TTC21BQ7Z4L5 1316 aa13.02□□□□□ -0.33
AC078883.3-202ENST00000417539 COL14A1Q05707 1796 aaKnown RBP13.02□□□□□ -0.33
AC078883.3-202ENST00000417539 U2SURPO15042 1029 aaKnown RBP13.01□□□□□ -0.33
AC078883.3-202ENST00000417539 ZNF772Q68DY9 489 aaPredicted RBP13.01□□□□□ -0.33
AC078883.3-202ENST00000417539 B4GALNT3Q6L9W6 998 aa13.01□□□□□ -0.33
AC078883.3-202ENST00000417539 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.01□□□□□ -0.33
AC078883.3-202ENST00000417539 TTC21AQ8NDW8 1320 aa13.01□□□□□ -0.33
AC078883.3-202ENST00000417539 MAPK8IP3Q9UPT6 1336 aa13□□□□□ -0.33
AC078883.3-202ENST00000417539 PAK3O75914 559 aaPredicted RBP13□□□□□ -0.33
AC078883.3-202ENST00000417539 FCHSD2O94868 740 aa13□□□□□ -0.33
AC078883.3-202ENST00000417539 LMOD2Q6P5Q4 547 aa13□□□□□ -0.33
AC078883.3-202ENST00000417539 NGLY1Q96IV0 654 aa13□□□□□ -0.33
AC078883.3-202ENST00000417539 CCDC136Q96JN2 1154 aa13□□□□□ -0.33
AC078883.3-202ENST00000417539 TSHZ2Q9NRE2 1034 aa13□□□□□ -0.33
AC078883.3-202ENST00000417539 SLIT3O75094 1523 aa12.99□□□□□ -0.33
AC078883.3-202ENST00000417539 OVOS2A0A0J9YW53 1432 aa12.99□□□□□ -0.33
AC078883.3-202ENST00000417539 ATRNO75882 1429 aa12.99□□□□□ -0.33
AC078883.3-202ENST00000417539 OVOS2Q6IE36 1432 aa12.99□□□□□ -0.33
AC078883.3-202ENST00000417539 USP19O94966 1318 aa12.99□□□□□ -0.33
AC078883.3-202ENST00000417539 COL18A1P39060 1754 aa12.99□□□□□ -0.33
AC078883.3-202ENST00000417539 LMO7Q8WWI1 1683 aa12.99□□□□□ -0.33
AC078883.3-202ENST00000417539 USP31Q70CQ4 1352 aa12.98□□□□□ -0.33
AC078883.3-202ENST00000417539 FAM83GA6ND36 823 aa12.98□□□□□ -0.33
AC078883.3-202ENST00000417539 ZRANB1Q9UGI0 708 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms