RNA–Protein interactions for RNA: ENST00000416754.1

RUNX1-206, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-206ENST00000416754 ABTB2Q8N961 1025 aa13.08□□□□□ -0.32
RUNX1-206ENST00000416754 ACEP12821 1306 aa13.08□□□□□ -0.32
RUNX1-206ENST00000416754 CASZ1Q86V15 1759 aa13.07□□□□□ -0.32
RUNX1-206ENST00000416754 MARCH10Q8NA82 808 aaPredicted RBP13.07□□□□□ -0.32
RUNX1-206ENST00000416754 CDK19Q9BWU1 502 aa13.07□□□□□ -0.32
RUNX1-206ENST00000416754 THRAP3Q9Y2W1 955 aaKnown RBP13.07□□□□□ -0.32
RUNX1-206ENST00000416754 MYOM1P52179 1685 aa13.07□□□□□ -0.32
RUNX1-206ENST00000416754 EIF3AQ14152 1382 aaKnown RBP13.07□□□□□ -0.32
RUNX1-206ENST00000416754 PHRF1Q9P1Y6 1649 aaKnown RBP13.06□□□□□ -0.32
RUNX1-206ENST00000416754 GCP02774 474 aa13.06□□□□□ -0.32
RUNX1-206ENST00000416754 TXNRD1Q16881 649 aa13.06□□□□□ -0.32
RUNX1-206ENST00000416754 SGIP1Q9BQI5 828 aa13.06□□□□□ -0.32
RUNX1-206ENST00000416754 ATP7BP35670 1465 aa13.05□□□□□ -0.32
RUNX1-206ENST00000416754 SLC15A2Q16348 729 aa13.05□□□□□ -0.32
RUNX1-206ENST00000416754 DDB1Q16531 1140 aa13.05□□□□□ -0.32
RUNX1-206ENST00000416754 STK32BQ9NY57 414 aa13.05□□□□□ -0.32
RUNX1-206ENST00000416754 USP19O94966 1318 aa13.05□□□□□ -0.32
RUNX1-206ENST00000416754 CEP350Q5VT06 3117 aa13.05□□□□□ -0.32
RUNX1-206ENST00000416754 CPDO75976 1380 aa13.05□□□□□ -0.32
RUNX1-206ENST00000416754 OVOS2A0A0G2JMS6 1433 aa13.05□□□□□ -0.32
RUNX1-206ENST00000416754 OVOS2A0A0J9YW53 1432 aa13.05□□□□□ -0.32
RUNX1-206ENST00000416754 OVOS2Q6IE36 1432 aa13.05□□□□□ -0.32
RUNX1-206ENST00000416754 PEAK1Q9H792 1746 aa13.04□□□□□ -0.32
RUNX1-206ENST00000416754 COL5A2P05997 1499 aaPredicted RBP13.03□□□□□ -0.32
RUNX1-206ENST00000416754 LMO7Q8WWI1 1683 aa13.02□□□□□ -0.32
RUNX1-206ENST00000416754 PLEKHG3A1L390 1219 aa13.02□□□□□ -0.33
RUNX1-206ENST00000416754 DCAF11Q8TEB1 546 aa13.02□□□□□ -0.33
RUNX1-206ENST00000416754 ARXQ96QS3 562 aa13.02□□□□□ -0.33
RUNX1-206ENST00000416754 MTFR1LQ9H019 292 aa13.02□□□□□ -0.33
RUNX1-206ENST00000416754 AXIN2Q9Y2T1 843 aa13.02□□□□□ -0.33
RUNX1-206ENST00000416754 POLR3AO14802 1390 aaPredicted RBP13.02□□□□□ -0.33
RUNX1-206ENST00000416754 C11orf95C9JLR9 678 aaPredicted RBP13.01□□□□□ -0.33
RUNX1-206ENST00000416754 PITPNM1O00562 1244 aa13.01□□□□□ -0.33
RUNX1-206ENST00000416754 GPR162Q16538 588 aa13.01□□□□□ -0.33
RUNX1-206ENST00000416754 TOM1L2Q6ZVM7 507 aa13.01□□□□□ -0.33
RUNX1-206ENST00000416754 NLRP13Q86W25 1043 aa13.01□□□□□ -0.33
RUNX1-206ENST00000416754 CCDC61Q9Y6R9 512 aa13.01□□□□□ -0.33
RUNX1-206ENST00000416754 CRB1P82279 1406 aa13.01□□□□□ -0.33
RUNX1-206ENST00000416754 PARP4Q9UKK3 1724 aaKnown RBP13□□□□□ -0.33
RUNX1-206ENST00000416754 GIGYF1O75420 1035 aaPredicted RBP13□□□□□ -0.33
RUNX1-206ENST00000416754 SBF2Q86WG5 1849 aa12.99□□□□□ -0.33
RUNX1-206ENST00000416754 PELP1Q8IZL8 1130 aaKnown RBP12.98□□□□□ -0.33
RUNX1-206ENST00000416754 KLHL34Q8N239 644 aa12.98□□□□□ -0.33
RUNX1-206ENST00000416754 NLRP6P59044 892 aa12.97□□□□□ -0.33
RUNX1-206ENST00000416754 ZNF827Q17R98 1081 aa12.97□□□□□ -0.33
RUNX1-206ENST00000416754 ACSBG1Q96GR2 724 aa12.97□□□□□ -0.33
RUNX1-206ENST00000416754 LRRC37A3O60309 1634 aa12.97□□□□□ -0.33
RUNX1-206ENST00000416754 CHD4Q14839 1912 aa12.97□□□□□ -0.33
RUNX1-206ENST00000416754 AATKQ6ZMQ8 1374 aa12.96□□□□□ -0.33
RUNX1-206ENST00000416754 PIP4P2Q8N4L2 257 aa12.96□□□□□ -0.33
RUNX1-206ENST00000416754 CABP2Q9NPB3 220 aa12.96□□□□□ -0.33
RUNX1-206ENST00000416754 RGPD3A6NKT7 1758 aaPredicted RBP12.95□□□□□ -0.34
RUNX1-206ENST00000416754 RGPD4Q7Z3J3 1758 aa12.95□□□□□ -0.34
RUNX1-206ENST00000416754 WDR17Q8IZU2 1322 aa12.94□□□□□ -0.34
RUNX1-206ENST00000416754 EXOC5O00471 708 aa12.94□□□□□ -0.34
RUNX1-206ENST00000416754 SOX12O15370 315 aa12.94□□□□□ -0.34
RUNX1-206ENST00000416754 NLGN2Q8NFZ4 835 aa12.94□□□□□ -0.34
RUNX1-206ENST00000416754 LRRC4BQ9NT99 713 aa12.94□□□□□ -0.34
RUNX1-206ENST00000416754 SPDYE2BA6NHP3 402 aa12.93□□□□□ -0.34
RUNX1-206ENST00000416754 SPDYE6P0CI01 402 aa12.93□□□□□ -0.34
RUNX1-206ENST00000416754 SRPK2P78362 688 aaKnown RBP12.93□□□□□ -0.34
RUNX1-206ENST00000416754 SPDYE2Q495Y8 402 aa12.93□□□□□ -0.34
RUNX1-206ENST00000416754 CABP1Q9NZU7 370 aa12.93□□□□□ -0.34
RUNX1-206ENST00000416754 BCL9O00512 1426 aa12.93□□□□□ -0.34
RUNX1-206ENST00000416754 ITSN1Q15811 1721 aa12.93□□□□□ -0.34
RUNX1-206ENST00000416754 CSB-PGBD3P0DP91 1061 aa12.92□□□□□ -0.34
RUNX1-206ENST00000416754 NBPF1Q3BBV0 1214 aa12.92□□□□□ -0.34
RUNX1-206ENST00000416754 PPIP5K1Q6PFW1 1433 aa12.92□□□□□ -0.34
RUNX1-206ENST00000416754 CARD10Q9BWT7 1032 aa12.92□□□□□ -0.34
RUNX1-206ENST00000416754 MAP3K5Q99683 1374 aa12.92□□□□□ -0.34
RUNX1-206ENST00000416754 ARHGEF28Q8N1W1 1705 aaKnown RBP12.91□□□□□ -0.34
RUNX1-206ENST00000416754 YBX3P16989 372 aaKnown RBP eCLIP12.91□□□□□ -0.34
RUNX1-206ENST00000416754 KCNQ4P56696 695 aa12.91□□□□□ -0.34
RUNX1-206ENST00000416754 ARHGEF25Q86VW2 580 aa12.91□□□□□ -0.34
RUNX1-206ENST00000416754 CDCA7Q9BWT1 371 aaPredicted RBP12.91□□□□□ -0.34
RUNX1-206ENST00000416754 TOPAZ1Q8N9V7 1692 aa12.91□□□□□ -0.34
RUNX1-206ENST00000416754 COL18A1P39060 1754 aa12.9□□□□□ -0.34
RUNX1-206ENST00000416754 GOLGB1Q14789 3259 aaKnown RBP12.9□□□□□ -0.34
RUNX1-206ENST00000416754 SHANK3Q9BYB0 1731 aa12.88□□□□□ -0.35
RUNX1-206ENST00000416754 FXR2P51116 673 aaKnown RBP eCLIP12.88□□□□□ -0.35
RUNX1-206ENST00000416754 SLIT3O75094 1523 aa12.88□□□□□ -0.35
RUNX1-206ENST00000416754 USP6P35125 1406 aa12.88□□□□□ -0.35
RUNX1-206ENST00000416754 CPSF1Q10570 1443 aaKnown RBP12.87□□□□□ -0.35
RUNX1-206ENST00000416754 PNPLA7Q6ZV29 1317 aa12.87□□□□□ -0.35
RUNX1-206ENST00000416754 POLD1P28340 1107 aa12.86□□□□□ -0.35
RUNX1-206ENST00000416754 ZNF692Q9BU19 519 aaPredicted RBP12.86□□□□□ -0.35
RUNX1-206ENST00000416754 SSUH2Q9Y2M2 353 aa12.86□□□□□ -0.35
RUNX1-206ENST00000416754 PAPPAQ13219 1627 aa12.85□□□□□ -0.35
RUNX1-206ENST00000416754 ZNF526Q8TF50 670 aaPredicted RBP12.85□□□□□ -0.35
RUNX1-206ENST00000416754 ATP10DQ9P241 1426 aa12.85□□□□□ -0.35
RUNX1-206ENST00000416754 AKAP12Q02952 1782 aa12.84□□□□□ -0.35
RUNX1-206ENST00000416754 RAB3GAP2Q9H2M9 1393 aa12.84□□□□□ -0.35
RUNX1-206ENST00000416754 STAC3Q96MF2 364 aa12.84□□□□□ -0.35
RUNX1-206ENST00000416754 NLRP2Q9NX02 1062 aa12.84□□□□□ -0.35
RUNX1-206ENST00000416754 TTC21BQ7Z4L5 1316 aa12.84□□□□□ -0.35
RUNX1-206ENST00000416754 RGPD5Q99666 1765 aa12.84□□□□□ -0.35
RUNX1-206ENST00000416754 KAT6BQ8WYB5 2073 aa12.84□□□□□ -0.35
RUNX1-206ENST00000416754 WNK3Q9BYP7 1800 aa12.83□□□□□ -0.35
RUNX1-206ENST00000416754 TNS2Q63HR2 1409 aa12.83□□□□□ -0.36
RUNX1-206ENST00000416754 HSPA6P17066 643 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms