RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 CABP1Q9NZU7 370 aa18.92■□□□□ 0.62
CPNE1-209ENST00000415920 LRRC37A3O60309 1634 aa18.92■□□□□ 0.62
CPNE1-209ENST00000415920 COL18A1P39060 1754 aa18.91■□□□□ 0.62
CPNE1-209ENST00000415920 CDCA8Q53HL2 280 aa18.9■□□□□ 0.62
CPNE1-209ENST00000415920 PARD3Q8TEW0 1356 aa18.9■□□□□ 0.62
CPNE1-209ENST00000415920 CCDC7Q96M83 1385 aa18.9■□□□□ 0.62
CPNE1-209ENST00000415920 KIF20BQ96Q89 1820 aa18.89■□□□□ 0.61
CPNE1-209ENST00000415920 KIF7Q2M1P5 1343 aa18.89■□□□□ 0.61
CPNE1-209ENST00000415920 CRB1P82279 1406 aa18.89■□□□□ 0.61
CPNE1-209ENST00000415920 SBF2Q86WG5 1849 aa18.88■□□□□ 0.61
CPNE1-209ENST00000415920 WNK3Q9BYP7 1800 aa18.88■□□□□ 0.61
CPNE1-209ENST00000415920 PTF1AQ7RTS3 328 aa18.88■□□□□ 0.61
CPNE1-209ENST00000415920 NLRP6P59044 892 aa18.87■□□□□ 0.61
CPNE1-209ENST00000415920 RGPD5Q99666 1765 aa18.87■□□□□ 0.61
CPNE1-209ENST00000415920 THRAP3Q9Y2W1 955 aaKnown RBP18.87■□□□□ 0.61
CPNE1-209ENST00000415920 WASHC2AQ641Q2 1341 aa18.86■□□□□ 0.61
CPNE1-209ENST00000415920 C11orf95C9JLR9 678 aaPredicted RBP18.86■□□□□ 0.61
CPNE1-209ENST00000415920 AXIN2Q9Y2T1 843 aa18.86■□□□□ 0.61
CPNE1-209ENST00000415920 AATKQ6ZMQ8 1374 aa18.85■□□□□ 0.61
CPNE1-209ENST00000415920 NINLQ9Y2I6 1382 aa18.85■□□□□ 0.61
CPNE1-209ENST00000415920 BRD4O60885 1362 aaPredicted RBP18.84■□□□□ 0.61
CPNE1-209ENST00000415920 TMC1Q8TDI8 760 aa18.84■□□□□ 0.61
CPNE1-209ENST00000415920 OVOS2A0A0G2JMS6 1433 aa18.83■□□□□ 0.61
CPNE1-209ENST00000415920 OVOS2A0A0J9YW53 1432 aa18.83■□□□□ 0.61
CPNE1-209ENST00000415920 OVOS2Q6IE36 1432 aa18.83■□□□□ 0.61
CPNE1-209ENST00000415920 ZNF316A6NFI3 1004 aaPredicted RBP18.83■□□□□ 0.6
CPNE1-209ENST00000415920 TOM1L2Q6ZVM7 507 aa18.82■□□□□ 0.6
CPNE1-209ENST00000415920 CPSF1Q10570 1443 aaKnown RBP18.82■□□□□ 0.6
CPNE1-209ENST00000415920 RGPD3A6NKT7 1758 aaPredicted RBP18.81■□□□□ 0.6
CPNE1-209ENST00000415920 RGPD4Q7Z3J3 1758 aa18.81■□□□□ 0.6
CPNE1-209ENST00000415920 ANKRD26Q9UPS8 1709 aa18.81■□□□□ 0.6
CPNE1-209ENST00000415920 SOX12O15370 315 aa18.81■□□□□ 0.6
CPNE1-209ENST00000415920 CD163L1Q9NR16 1453 aa18.81■□□□□ 0.6
CPNE1-209ENST00000415920 TTC21BQ7Z4L5 1316 aa18.8■□□□□ 0.6
CPNE1-209ENST00000415920 NBPF14Q5TI25 921 aa18.8■□□□□ 0.6
CPNE1-209ENST00000415920 PUS7Q96PZ0 661 aaKnown RBP18.8■□□□□ 0.6
CPNE1-209ENST00000415920 ANO8Q9HCE9 1232 aaPredicted RBP18.8■□□□□ 0.6
CPNE1-209ENST00000415920 WDR17Q8IZU2 1322 aa18.79■□□□□ 0.6
CPNE1-209ENST00000415920 DDB1Q16531 1140 aa18.79■□□□□ 0.6
CPNE1-209ENST00000415920 MARCH10Q8NA82 808 aaPredicted RBP18.79■□□□□ 0.6
CPNE1-209ENST00000415920 A0A1W2PP64 1363 aa18.79■□□□□ 0.6
CPNE1-209ENST00000415920 NFAT5O94916 1531 aa18.79■□□□□ 0.6
CPNE1-209ENST00000415920 CASZ1Q86V15 1759 aa18.78■□□□□ 0.6
CPNE1-209ENST00000415920 ARHGEF25Q86VW2 580 aa18.78■□□□□ 0.6
CPNE1-209ENST00000415920 PDGFDQ9GZP0 370 aaPredicted RBP18.78■□□□□ 0.6
CPNE1-209ENST00000415920 ANKRD36BQ8N2N9 1353 aa18.78■□□□□ 0.6
CPNE1-209ENST00000415920 PROM2Q8N271 834 aa18.76■□□□□ 0.59
CPNE1-209ENST00000415920 SLC12A5Q9H2X9 1139 aa18.76■□□□□ 0.59
CPNE1-209ENST00000415920 KTN1Q86UP2 1357 aaKnown RBP18.75■□□□□ 0.59
CPNE1-209ENST00000415920 NSD3Q9BZ95 1437 aa18.74■□□□□ 0.59
CPNE1-209ENST00000415920 PLSCR1O15162 318 aa18.74■□□□□ 0.59
CPNE1-209ENST00000415920 KCNQ2O43526 872 aa18.74■□□□□ 0.59
CPNE1-209ENST00000415920 HDGFL2Q7Z4V5 671 aaPredicted RBP18.74■□□□□ 0.59
CPNE1-209ENST00000415920 BCL11BQ9C0K0 894 aaPredicted RBP18.74■□□□□ 0.59
CPNE1-209ENST00000415920 SPON1Q9HCB6 807 aa18.74■□□□□ 0.59
CPNE1-209ENST00000415920 USP54Q70EL1 1684 aa18.73■□□□□ 0.59
CPNE1-209ENST00000415920 TERF2IPQ9NYB0 399 aa18.73■□□□□ 0.59
CPNE1-209ENST00000415920 CSB-PGBD3P0DP91 1061 aa18.72■□□□□ 0.59
CPNE1-209ENST00000415920 CARD10Q9BWT7 1032 aa18.72■□□□□ 0.59
CPNE1-209ENST00000415920 EDC4Q6P2E9 1401 aaKnown RBP18.72■□□□□ 0.59
CPNE1-209ENST00000415920 KCNH5Q8NCM2 988 aa18.71■□□□□ 0.59
CPNE1-209ENST00000415920 ZNF692Q9BU19 519 aaPredicted RBP18.71■□□□□ 0.59
CPNE1-209ENST00000415920 PPP1R1BQ9UD71 204 aaPredicted RBP18.71■□□□□ 0.59
CPNE1-209ENST00000415920 BCL9O00512 1426 aa18.71■□□□□ 0.59
CPNE1-209ENST00000415920 TTC21AQ8NDW8 1320 aa18.71■□□□□ 0.59
CPNE1-209ENST00000415920 LTN1O94822 1766 aa18.69■□□□□ 0.58
CPNE1-209ENST00000415920 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.69■□□□□ 0.58
CPNE1-209ENST00000415920 ZBTB7AO95365 584 aa18.68■□□□□ 0.58
CPNE1-209ENST00000415920 DDX10Q13206 875 aaKnown RBP18.68■□□□□ 0.58
CPNE1-209ENST00000415920 NME9Q86XW9 330 aa18.68■□□□□ 0.58
CPNE1-209ENST00000415920 CDCA7Q9BWT1 371 aaPredicted RBP18.68■□□□□ 0.58
CPNE1-209ENST00000415920 PANK3Q9H999 370 aa18.68■□□□□ 0.58
CPNE1-209ENST00000415920 TNS2Q63HR2 1409 aa18.67■□□□□ 0.58
CPNE1-209ENST00000415920 NHSQ6T4R5 1651 aa18.67■□□□□ 0.58
CPNE1-209ENST00000415920 YY1P25490 414 aa18.67■□□□□ 0.58
CPNE1-209ENST00000415920 TXNRD1Q16881 649 aa18.67■□□□□ 0.58
CPNE1-209ENST00000415920 ABCC6O95255 1503 aa18.67■□□□□ 0.58
CPNE1-209ENST00000415920 USP31Q70CQ4 1352 aa18.66■□□□□ 0.58
CPNE1-209ENST00000415920 EXOC5O00471 708 aa18.65■□□□□ 0.58
CPNE1-209ENST00000415920 PTGER2P43116 358 aa18.65■□□□□ 0.58
CPNE1-209ENST00000415920 ACSBG1Q96GR2 724 aa18.64■□□□□ 0.57
CPNE1-209ENST00000415920 ATF5Q9Y2D1 282 aaPredicted RBP18.64■□□□□ 0.57
CPNE1-209ENST00000415920 ERBB3P21860 1342 aa18.64■□□□□ 0.57
CPNE1-209ENST00000415920 PAPPAQ13219 1627 aa18.63■□□□□ 0.57
CPNE1-209ENST00000415920 CARD14Q9BXL6 1004 aa18.62■□□□□ 0.57
CPNE1-209ENST00000415920 NLRP2Q9NX02 1062 aa18.62■□□□□ 0.57
CPNE1-209ENST00000415920 BTAF1O14981 1849 aa18.62■□□□□ 0.57
CPNE1-209ENST00000415920 SLC15A2Q16348 729 aa18.61■□□□□ 0.57
CPNE1-209ENST00000415920 STK32BQ9NY57 414 aa18.61■□□□□ 0.57
CPNE1-209ENST00000415920 CGNL1Q0VF96 1302 aa18.6■□□□□ 0.57
CPNE1-209ENST00000415920 KNSTRNQ9Y448 316 aa18.6■□□□□ 0.57
CPNE1-209ENST00000415920 MAP2P11137 1827 aaKnown RBP18.6■□□□□ 0.57
CPNE1-209ENST00000415920 CNGB1Q14028 1251 aaPredicted RBP18.59■□□□□ 0.57
CPNE1-209ENST00000415920 ANKRD24Q8TF21 1146 aa18.59■□□□□ 0.57
CPNE1-209ENST00000415920 NSD2O96028 1365 aa18.58■□□□□ 0.57
CPNE1-209ENST00000415920 IL2RBP14784 551 aa18.57■□□□□ 0.56
CPNE1-209ENST00000415920 SGIP1Q9BQI5 828 aa18.57■□□□□ 0.56
CPNE1-209ENST00000415920 ZNF827Q17R98 1081 aa18.56■□□□□ 0.56
CPNE1-209ENST00000415920 GGNBP2Q9H3C7 697 aa18.56■□□□□ 0.56
CPNE1-209ENST00000415920 KAT6BQ8WYB5 2073 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms