RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 PIK3C2AO00443 1686 aa22.23■■□□□ 1.15
SBDSP1-201ENST00000415772 TTC21BQ7Z4L5 1316 aa22.22■■□□□ 1.15
SBDSP1-201ENST00000415772 CPSF1Q10570 1443 aaKnown RBP22.22■■□□□ 1.15
SBDSP1-201ENST00000415772 LRRC37A3O60309 1634 aa22.21■■□□□ 1.15
SBDSP1-201ENST00000415772 SIN3AQ96ST3 1273 aa22.21■■□□□ 1.15
SBDSP1-201ENST00000415772 TTC21AQ8NDW8 1320 aa22.21■■□□□ 1.15
SBDSP1-201ENST00000415772 KTN1Q86UP2 1357 aaKnown RBP22.19■■□□□ 1.14
SBDSP1-201ENST00000415772 PLSCR1O15162 318 aa22.18■■□□□ 1.14
SBDSP1-201ENST00000415772 KCNQ2O43526 872 aa22.18■■□□□ 1.14
SBDSP1-201ENST00000415772 BCL11BQ9C0K0 894 aaPredicted RBP22.18■■□□□ 1.14
SBDSP1-201ENST00000415772 AXIN2Q9Y2T1 843 aa22.18■■□□□ 1.14
SBDSP1-201ENST00000415772 ARHGEF25Q86VW2 580 aa22.17■■□□□ 1.14
SBDSP1-201ENST00000415772 EXOC5O00471 708 aa22.16■■□□□ 1.14
SBDSP1-201ENST00000415772 CARD10Q9BWT7 1032 aa22.16■■□□□ 1.14
SBDSP1-201ENST00000415772 WNK3Q9BYP7 1800 aa22.15■■□□□ 1.14
SBDSP1-201ENST00000415772 AKAP12Q02952 1782 aa22.15■■□□□ 1.14
SBDSP1-201ENST00000415772 PEAK1Q9H792 1746 aa22.15■■□□□ 1.14
SBDSP1-201ENST00000415772 RGPD3A6NKT7 1758 aaPredicted RBP22.15■■□□□ 1.14
SBDSP1-201ENST00000415772 RGPD4Q7Z3J3 1758 aa22.15■■□□□ 1.14
SBDSP1-201ENST00000415772 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.14■■□□□ 1.13
SBDSP1-201ENST00000415772 COL18A1P39060 1754 aa22.14■■□□□ 1.13
SBDSP1-201ENST00000415772 CCDC7Q96M83 1385 aa22.13■■□□□ 1.13
SBDSP1-201ENST00000415772 MARCH10Q8NA82 808 aaPredicted RBP22.13■■□□□ 1.13
SBDSP1-201ENST00000415772 YY1P25490 414 aa22.12■■□□□ 1.13
SBDSP1-201ENST00000415772 TMC1Q8TDI8 760 aa22.12■■□□□ 1.13
SBDSP1-201ENST00000415772 SBF2Q86WG5 1849 aa22.12■■□□□ 1.13
SBDSP1-201ENST00000415772 HDGFL2Q7Z4V5 671 aaPredicted RBP22.11■■□□□ 1.13
SBDSP1-201ENST00000415772 RGPD5Q99666 1765 aa22.11■■□□□ 1.13
SBDSP1-201ENST00000415772 CARD11Q9BXL7 1154 aa22.1■■□□□ 1.13
SBDSP1-201ENST00000415772 STK32BQ9NY57 414 aa22.1■■□□□ 1.13
SBDSP1-201ENST00000415772 NINLQ9Y2I6 1382 aa22.1■■□□□ 1.13
SBDSP1-201ENST00000415772 NLRP2Q9NX02 1062 aa22.09■■□□□ 1.13
SBDSP1-201ENST00000415772 NFAT5O94916 1531 aa22.07■■□□□ 1.12
SBDSP1-201ENST00000415772 ABCC6O95255 1503 aa22.07■■□□□ 1.12
SBDSP1-201ENST00000415772 PTF1AQ7RTS3 328 aa22.07■■□□□ 1.12
SBDSP1-201ENST00000415772 ANO8Q9HCE9 1232 aaPredicted RBP22.07■■□□□ 1.12
SBDSP1-201ENST00000415772 BCL9O00512 1426 aa22.06■■□□□ 1.12
SBDSP1-201ENST00000415772 MON2Q7Z3U7 1717 aa22.06■■□□□ 1.12
SBDSP1-201ENST00000415772 TXNRD1Q16881 649 aa22.06■■□□□ 1.12
SBDSP1-201ENST00000415772 TNS2Q63HR2 1409 aa22.06■■□□□ 1.12
SBDSP1-201ENST00000415772 SBNO2Q9Y2G9 1366 aa22.04■■□□□ 1.12
SBDSP1-201ENST00000415772 ZBTB7AO95365 584 aa22.04■■□□□ 1.12
SBDSP1-201ENST00000415772 NME9Q86XW9 330 aa22.04■■□□□ 1.12
SBDSP1-201ENST00000415772 TERF2IPQ9NYB0 399 aa22.04■■□□□ 1.12
SBDSP1-201ENST00000415772 ACSBG1Q96GR2 724 aa22.03■■□□□ 1.12
SBDSP1-201ENST00000415772 TONSLQ96HA7 1378 aa22.02■■□□□ 1.12
SBDSP1-201ENST00000415772 IL2RBP14784 551 aa22.02■■□□□ 1.12
SBDSP1-201ENST00000415772 ERBB3P21860 1342 aa22.02■■□□□ 1.12
SBDSP1-201ENST00000415772 USP31Q70CQ4 1352 aa22.01■■□□□ 1.11
SBDSP1-201ENST00000415772 SLC15A2Q16348 729 aa22.01■■□□□ 1.11
SBDSP1-201ENST00000415772 ANKRD24Q8TF21 1146 aa22.01■■□□□ 1.11
SBDSP1-201ENST00000415772 ATF5Q9Y2D1 282 aaPredicted RBP22.01■■□□□ 1.11
SBDSP1-201ENST00000415772 CASZ1Q86V15 1759 aa22■■□□□ 1.11
SBDSP1-201ENST00000415772 PROM2Q8N271 834 aa22■■□□□ 1.11
SBDSP1-201ENST00000415772 LTN1O94822 1766 aa21.99■■□□□ 1.11
SBDSP1-201ENST00000415772 EDC4Q6P2E9 1401 aaKnown RBP21.99■■□□□ 1.11
SBDSP1-201ENST00000415772 SLC12A5Q9H2X9 1139 aa21.98■■□□□ 1.11
SBDSP1-201ENST00000415772 NHSQ6T4R5 1651 aa21.98■■□□□ 1.11
SBDSP1-201ENST00000415772 PDGFDQ9GZP0 370 aaPredicted RBP21.97■■□□□ 1.11
SBDSP1-201ENST00000415772 USP54Q70EL1 1684 aa21.96■■□□□ 1.11
SBDSP1-201ENST00000415772 MTFR1LQ9H019 292 aa21.95■■□□□ 1.1
SBDSP1-201ENST00000415772 LTV1Q96GA3 475 aaPredicted RBP21.94■■□□□ 1.1
SBDSP1-201ENST00000415772 CD163L1Q9NR16 1453 aa21.94■■□□□ 1.1
SBDSP1-201ENST00000415772 MYOM1P52179 1685 aa21.94■■□□□ 1.1
SBDSP1-201ENST00000415772 A0A1W2PP64 1363 aa21.93■■□□□ 1.1
SBDSP1-201ENST00000415772 DDX54Q8TDD1 881 aaKnown RBP21.92■■□□□ 1.1
SBDSP1-201ENST00000415772 COG3Q96JB2 828 aa21.92■■□□□ 1.1
SBDSP1-201ENST00000415772 SLC24A1O60721 1099 aa21.91■■□□□ 1.1
SBDSP1-201ENST00000415772 PTGER2P43116 358 aa21.91■■□□□ 1.1
SBDSP1-201ENST00000415772 PUS7Q96PZ0 661 aaKnown RBP21.9■■□□□ 1.1
SBDSP1-201ENST00000415772 FHDC1Q9C0D6 1143 aaPredicted RBP21.9■■□□□ 1.1
SBDSP1-201ENST00000415772 AMPHP49418 695 aa21.89■■□□□ 1.09
SBDSP1-201ENST00000415772 IP6K1Q92551 441 aa21.89■■□□□ 1.09
SBDSP1-201ENST00000415772 SYTL4Q96C24 671 aaPredicted RBP21.89■■□□□ 1.09
SBDSP1-201ENST00000415772 FAM208AQ9UK61 1670 aaKnown RBP21.88■■□□□ 1.09
SBDSP1-201ENST00000415772 BTAF1O14981 1849 aa21.88■■□□□ 1.09
SBDSP1-201ENST00000415772 ARXQ96QS3 562 aa21.87■■□□□ 1.09
SBDSP1-201ENST00000415772 SYT17Q9BSW7 474 aa21.87■■□□□ 1.09
SBDSP1-201ENST00000415772 KLHL34Q8N239 644 aa21.85■■□□□ 1.09
SBDSP1-201ENST00000415772 ST20-MTHFSA0A0A6YYL1 179 aa21.84■■□□□ 1.09
SBDSP1-201ENST00000415772 SLC27A3Q5K4L6 730 aa21.84■■□□□ 1.09
SBDSP1-201ENST00000415772 POLD1P28340 1107 aa21.83■■□□□ 1.09
SBDSP1-201ENST00000415772 TRIM26Q12899 539 aaPredicted RBP21.83■■□□□ 1.09
SBDSP1-201ENST00000415772 KAT6BQ8WYB5 2073 aa21.83■■□□□ 1.08
SBDSP1-201ENST00000415772 HOXC9P31274 260 aa21.82■■□□□ 1.08
SBDSP1-201ENST00000415772 MAP3K19Q56UN5 1328 aa21.81■■□□□ 1.08
SBDSP1-201ENST00000415772 PAPPAQ13219 1627 aa21.81■■□□□ 1.08
SBDSP1-201ENST00000415772 ZNF827Q17R98 1081 aa21.81■■□□□ 1.08
SBDSP1-201ENST00000415772 TFCP2L1Q9NZI6 479 aa21.81■■□□□ 1.08
SBDSP1-201ENST00000415772 SMG6Q86US8 1419 aaKnown RBP21.8■■□□□ 1.08
SBDSP1-201ENST00000415772 ZCRB1Q8TBF4 217 aaKnown RBP21.8■■□□□ 1.08
SBDSP1-201ENST00000415772 SLC16A10Q8TF71 515 aa21.8■■□□□ 1.08
SBDSP1-201ENST00000415772 LRRC4BQ9NT99 713 aa21.8■■□□□ 1.08
SBDSP1-201ENST00000415772 PRIM1P49642 420 aaKnown RBP21.79■■□□□ 1.08
SBDSP1-201ENST00000415772 ANKRD36BQ8N2N9 1353 aa21.78■■□□□ 1.08
SBDSP1-201ENST00000415772 TMF1P82094 1093 aa21.78■■□□□ 1.08
SBDSP1-201ENST00000415772 GPR162Q16538 588 aa21.78■■□□□ 1.08
SBDSP1-201ENST00000415772 PELP1Q8IZL8 1130 aaKnown RBP21.78■■□□□ 1.08
SBDSP1-201ENST00000415772 SGIP1Q9BQI5 828 aa21.78■■□□□ 1.08
SBDSP1-201ENST00000415772 MSH5O43196 834 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms