RNA–Protein interactions for RNA: ENST00000415068.1

ZNF3-206, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best)

Gene ZNF3, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-206ENST00000415068 CCDC146Q8IYE0 955 aa17.57■□□□□ 0.4
ZNF3-206ENST00000415068 IQSEC2Q5JU85 1478 aa17.56■□□□□ 0.4
ZNF3-206ENST00000415068 PEAK1Q9H792 1746 aa17.56■□□□□ 0.4
ZNF3-206ENST00000415068 TNS3Q68CZ2 1445 aa17.55■□□□□ 0.4
ZNF3-206ENST00000415068 KDRP35968 1356 aa17.55■□□□□ 0.4
ZNF3-206ENST00000415068 RNF123Q5XPI4 1314 aa17.55■□□□□ 0.4
ZNF3-206ENST00000415068 IL16Q14005 1332 aa17.54■□□□□ 0.4
ZNF3-206ENST00000415068 E9PSI1 815 aa17.54■□□□□ 0.4
ZNF3-206ENST00000415068 NEFMP07197 916 aa17.54■□□□□ 0.4
ZNF3-206ENST00000415068 NUTM2GQ5VZR2 741 aa17.54■□□□□ 0.4
ZNF3-206ENST00000415068 RGPD1P0DJD0 1748 aa17.54■□□□□ 0.4
ZNF3-206ENST00000415068 IGSF1Q8N6C5 1336 aa17.53■□□□□ 0.4
ZNF3-206ENST00000415068 DUSP27Q5VZP5 1158 aa17.53■□□□□ 0.4
ZNF3-206ENST00000415068 ERICH6BQ5W0A0 696 aa17.52■□□□□ 0.4
ZNF3-206ENST00000415068 MED1Q15648 1581 aaPredicted RBP17.52■□□□□ 0.39
ZNF3-206ENST00000415068 CPDO75976 1380 aa17.52■□□□□ 0.39
ZNF3-206ENST00000415068 ABCC6O95255 1503 aa17.52■□□□□ 0.39
ZNF3-206ENST00000415068 MAPK8IP3Q9UPT6 1336 aa17.51■□□□□ 0.39
ZNF3-206ENST00000415068 PRKAR2BP31323 418 aa17.51■□□□□ 0.39
ZNF3-206ENST00000415068 XPCQ01831 940 aaPredicted RBP17.51■□□□□ 0.39
ZNF3-206ENST00000415068 NFE2L2Q16236 605 aa17.51■□□□□ 0.39
ZNF3-206ENST00000415068 EYA1Q99502 592 aa17.51■□□□□ 0.39
ZNF3-206ENST00000415068 TRIM35Q9UPQ4 493 aa17.51■□□□□ 0.39
ZNF3-206ENST00000415068 CDCA7LQ96GN5 454 aa17.5■□□□□ 0.39
ZNF3-206ENST00000415068 NHSL1Q5SYE7 1610 aa17.5■□□□□ 0.39
ZNF3-206ENST00000415068 PHACTR3Q96KR7 559 aa17.49■□□□□ 0.39
ZNF3-206ENST00000415068 SALL2Q9Y467 1007 aaPredicted RBP17.49■□□□□ 0.39
ZNF3-206ENST00000415068 PLEKHG2Q9H7P9 1386 aa17.49■□□□□ 0.39
ZNF3-206ENST00000415068 NCAPD2Q15021 1401 aa17.48■□□□□ 0.39
ZNF3-206ENST00000415068 HTATSF1O43719 755 aaKnown RBP17.48■□□□□ 0.39
ZNF3-206ENST00000415068 RIPK4P57078 832 aa17.48■□□□□ 0.39
ZNF3-206ENST00000415068 SULT6B1Q6IMI4 303 aa17.48■□□□□ 0.39
ZNF3-206ENST00000415068 DDX17Q92841 729 aaKnown RBP17.48■□□□□ 0.39
ZNF3-206ENST00000415068 LRRC59Q96AG4 307 aaKnown RBP17.48■□□□□ 0.39
ZNF3-206ENST00000415068 GTF3C3Q9Y5Q9 886 aa17.48■□□□□ 0.39
ZNF3-206ENST00000415068 CALD1Q05682 793 aaKnown RBP17.47■□□□□ 0.39
ZNF3-206ENST00000415068 LMOD3Q0VAK6 560 aa17.47■□□□□ 0.39
ZNF3-206ENST00000415068 LTN1O94822 1766 aa17.46■□□□□ 0.39
ZNF3-206ENST00000415068 TOM1O60784 492 aa17.46■□□□□ 0.39
ZNF3-206ENST00000415068 HMOX1P09601 288 aa17.46■□□□□ 0.39
ZNF3-206ENST00000415068 CT47B1P0C2W7 299 aaPredicted RBP17.46■□□□□ 0.39
ZNF3-206ENST00000415068 LMOD2Q6P5Q4 547 aa17.46■□□□□ 0.39
ZNF3-206ENST00000415068 SUPT16HQ9Y5B9 1047 aaKnown RBP17.46■□□□□ 0.39
ZNF3-206ENST00000415068 SOX12O15370 315 aa17.45■□□□□ 0.38
ZNF3-206ENST00000415068 AHDC1Q5TGY3 1603 aaPredicted RBP17.45■□□□□ 0.38
ZNF3-206ENST00000415068 CRYBG1Q9Y4K1 1723 aa17.44■□□□□ 0.38
ZNF3-206ENST00000415068 AEBP2Q6ZN18 517 aaPredicted RBP17.44■□□□□ 0.38
ZNF3-206ENST00000415068 MYH16Q9H6N6 1097 aa17.44■□□□□ 0.38
ZNF3-206ENST00000415068 SPINK5Q9NQ38 1064 aaPredicted RBP17.44■□□□□ 0.38
ZNF3-206ENST00000415068 COL18A1P39060 1754 aa17.43■□□□□ 0.38
ZNF3-206ENST00000415068 RCAN3Q9UKA8 241 aa17.43■□□□□ 0.38
ZNF3-206ENST00000415068 AEBP1Q8IUX7 1158 aa17.42■□□□□ 0.38
ZNF3-206ENST00000415068 AXIN2Q9Y2T1 843 aa17.42■□□□□ 0.38
ZNF3-206ENST00000415068 RRP7AQ9Y3A4 280 aaKnown RBP17.42■□□□□ 0.38
ZNF3-206ENST00000415068 ZNF853P0CG23 659 aa17.41■□□□□ 0.38
ZNF3-206ENST00000415068 NEUROD2Q15784 382 aa17.41■□□□□ 0.38
ZNF3-206ENST00000415068 NBPF6Q5VWK0 638 aa17.41■□□□□ 0.38
ZNF3-206ENST00000415068 NBPF4Q96M43 638 aa17.41■□□□□ 0.38
ZNF3-206ENST00000415068 GAS2L2Q8NHY3 880 aa17.4■□□□□ 0.38
ZNF3-206ENST00000415068 ZC3H6P61129 1189 aaKnown RBP17.39■□□□□ 0.37
ZNF3-206ENST00000415068 ANKRD24Q8TF21 1146 aa17.39■□□□□ 0.37
ZNF3-206ENST00000415068 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.39■□□□□ 0.37
ZNF3-206ENST00000415068 ERBB3P21860 1342 aa17.39■□□□□ 0.37
ZNF3-206ENST00000415068 SENP3-EIF4A1A0A087X0R7 540 aa17.38■□□□□ 0.37
ZNF3-206ENST00000415068 AMOTQ4VCS5 1084 aa17.38■□□□□ 0.37
ZNF3-206ENST00000415068 ZNF428Q96B54 188 aa17.38■□□□□ 0.37
ZNF3-206ENST00000415068 IFT57Q9NWB7 429 aa17.38■□□□□ 0.37
ZNF3-206ENST00000415068 BABAM1Q9NWV8 329 aa17.38■□□□□ 0.37
ZNF3-206ENST00000415068 ROBO1Q9Y6N7 1651 aa17.37■□□□□ 0.37
ZNF3-206ENST00000415068 CAMTA1Q9Y6Y1 1673 aa17.37■□□□□ 0.37
ZNF3-206ENST00000415068 NEFLP07196 543 aa17.37■□□□□ 0.37
ZNF3-206ENST00000415068 GNAI1P63096 354 aa17.37■□□□□ 0.37
ZNF3-206ENST00000415068 CFAP44Q96MT7 982 aa17.37■□□□□ 0.37
ZNF3-206ENST00000415068 MTHFSDQ2M296 383 aaKnown RBP17.36■□□□□ 0.37
ZNF3-206ENST00000415068 CABLES1Q8TDN4 633 aa17.36■□□□□ 0.37
ZNF3-206ENST00000415068 LMO7Q8WWI1 1683 aa17.36■□□□□ 0.37
ZNF3-206ENST00000415068 KIAA0232Q92628 1395 aa17.35■□□□□ 0.37
ZNF3-206ENST00000415068 COL22A1Q8NFW1 1626 aaPredicted RBP17.35■□□□□ 0.37
ZNF3-206ENST00000415068 CHL1O00533 1208 aa17.34■□□□□ 0.37
ZNF3-206ENST00000415068 PLEKHO1Q53GL0 409 aaPredicted RBP17.34■□□□□ 0.37
ZNF3-206ENST00000415068 GNAT3A8MTJ3 354 aa17.33■□□□□ 0.36
ZNF3-206ENST00000415068 BRPF1P55201 1214 aaPredicted RBP17.33■□□□□ 0.36
ZNF3-206ENST00000415068 LTV1Q96GA3 475 aaPredicted RBP17.33■□□□□ 0.36
ZNF3-206ENST00000415068 DLG5Q8TDM6 1919 aa17.33■□□□□ 0.36
ZNF3-206ENST00000415068 FAM208AQ9UK61 1670 aaKnown RBP17.32■□□□□ 0.36
ZNF3-206ENST00000415068 CERKQ8TCT0 537 aa17.32■□□□□ 0.36
ZNF3-206ENST00000415068 RRP1P56182 461 aaKnown RBP17.31■□□□□ 0.36
ZNF3-206ENST00000415068 PRDM11Q9NQV5 511 aa17.31■□□□□ 0.36
ZNF3-206ENST00000415068 WDR17Q8IZU2 1322 aa17.3■□□□□ 0.36
ZNF3-206ENST00000415068 FANCIQ9NVI1 1328 aa17.3■□□□□ 0.36
ZNF3-206ENST00000415068 FAM83GA6ND36 823 aa17.3■□□□□ 0.36
ZNF3-206ENST00000415068 FKBP8Q14318 412 aa17.3■□□□□ 0.36
ZNF3-206ENST00000415068 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.3■□□□□ 0.36
ZNF3-206ENST00000415068 RGPD5Q99666 1765 aa17.3■□□□□ 0.36
ZNF3-206ENST00000415068 CRB1P82279 1406 aa17.3■□□□□ 0.36
ZNF3-206ENST00000415068 RARSP54136 660 aaKnown RBP17.29■□□□□ 0.36
ZNF3-206ENST00000415068 AKAP4Q5JQC9 854 aa17.29■□□□□ 0.36
ZNF3-206ENST00000415068 RTF1Q92541 710 aaKnown RBP17.29■□□□□ 0.36
ZNF3-206ENST00000415068 CARD10Q9BWT7 1032 aa17.29■□□□□ 0.36
ZNF3-206ENST00000415068 CEMIPQ8WUJ3 1361 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms