RNA–Protein interactions for RNA: ENST00000414142.5

SNHG17-202, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,102 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-202ENST00000414142 FANCIQ9NVI1 1328 aa17.75■□□□□ 0.43
SNHG17-202ENST00000414142 RARSP54136 660 aaKnown RBP17.74■□□□□ 0.43
SNHG17-202ENST00000414142 AMPHP49418 695 aa17.74■□□□□ 0.43
SNHG17-202ENST00000414142 PSME1Q06323 249 aa17.74■□□□□ 0.43
SNHG17-202ENST00000414142 SULT6B1Q6IMI4 303 aa17.73■□□□□ 0.43
SNHG17-202ENST00000414142 SBNO1A3KN83 1393 aa17.73■□□□□ 0.43
SNHG17-202ENST00000414142 EXOSC9Q06265 439 aaKnown RBP17.72■□□□□ 0.43
SNHG17-202ENST00000414142 FRAT1Q92837 279 aaPredicted RBP17.72■□□□□ 0.43
SNHG17-202ENST00000414142 FLT4P35916 1363 aa17.71■□□□□ 0.43
SNHG17-202ENST00000414142 AEBP1Q8IUX7 1158 aa17.71■□□□□ 0.43
SNHG17-202ENST00000414142 CT47B1P0C2W7 299 aaPredicted RBP17.71■□□□□ 0.42
SNHG17-202ENST00000414142 CALD1Q05682 793 aaKnown RBP17.7■□□□□ 0.42
SNHG17-202ENST00000414142 LMOD3Q0VAK6 560 aa17.7■□□□□ 0.42
SNHG17-202ENST00000414142 PDE3AQ14432 1141 aa17.7■□□□□ 0.42
SNHG17-202ENST00000414142 LAS1LQ9Y4W2 734 aaKnown RBP17.7■□□□□ 0.42
SNHG17-202ENST00000414142 HSPA2P54652 639 aa17.69■□□□□ 0.42
SNHG17-202ENST00000414142 ORAI2Q96SN7 254 aa17.69■□□□□ 0.42
SNHG17-202ENST00000414142 BCL2L13Q9BXK5 485 aa17.69■□□□□ 0.42
SNHG17-202ENST00000414142 DLG5Q8TDM6 1919 aa17.69■□□□□ 0.42
SNHG17-202ENST00000414142 MARF1Q9Y4F3 1742 aaKnown RBP17.69■□□□□ 0.42
SNHG17-202ENST00000414142 C19orf44Q9H6X5 657 aa17.68■□□□□ 0.42
SNHG17-202ENST00000414142 USP54Q70EL1 1684 aa17.68■□□□□ 0.42
SNHG17-202ENST00000414142 THUMPD2Q9BTF0 503 aaKnown RBP17.68■□□□□ 0.42
SNHG17-202ENST00000414142 FOXO3O43524 673 aa17.66■□□□□ 0.42
SNHG17-202ENST00000414142 RGPD1P0DJD0 1748 aa17.66■□□□□ 0.42
SNHG17-202ENST00000414142 ARHGEF10O15013 1369 aa17.66■□□□□ 0.42
SNHG17-202ENST00000414142 PANK1Q8TE04 598 aa17.66■□□□□ 0.42
SNHG17-202ENST00000414142 HOXC9P31274 260 aa17.65■□□□□ 0.42
SNHG17-202ENST00000414142 GNAI1P63096 354 aa17.65■□□□□ 0.42
SNHG17-202ENST00000414142 KIF24Q5T7B8 1368 aa17.65■□□□□ 0.42
SNHG17-202ENST00000414142 XPCQ01831 940 aaPredicted RBP17.65■□□□□ 0.42
SNHG17-202ENST00000414142 SMC4Q9NTJ3 1288 aa17.64■□□□□ 0.41
SNHG17-202ENST00000414142 IFT57Q9NWB7 429 aa17.64■□□□□ 0.41
SNHG17-202ENST00000414142 FAM83GA6ND36 823 aa17.63■□□□□ 0.41
SNHG17-202ENST00000414142 ATF3P18847 181 aa17.63■□□□□ 0.41
SNHG17-202ENST00000414142 EYA1Q99502 592 aa17.63■□□□□ 0.41
SNHG17-202ENST00000414142 COG6Q9Y2V7 657 aa17.63■□□□□ 0.41
SNHG17-202ENST00000414142 TMEM94Q12767 1356 aa17.63■□□□□ 0.41
SNHG17-202ENST00000414142 KDM4FA0A1W2PPD8 638 aa17.63■□□□□ 0.41
SNHG17-202ENST00000414142 STRCP1A6NGW2 1772 aa17.62■□□□□ 0.41
SNHG17-202ENST00000414142 DCTN1Q14203 1278 aa17.62■□□□□ 0.41
SNHG17-202ENST00000414142 C1orf167Q5SNV9 1468 aa17.62■□□□□ 0.41
SNHG17-202ENST00000414142 LMOD2Q6P5Q4 547 aa17.62■□□□□ 0.41
SNHG17-202ENST00000414142 SSH1Q8WYL5 1049 aa17.62■□□□□ 0.41
SNHG17-202ENST00000414142 LTV1Q96GA3 475 aaPredicted RBP17.62■□□□□ 0.41
SNHG17-202ENST00000414142 ZKSCAN2Q63HK3 967 aa17.61■□□□□ 0.41
SNHG17-202ENST00000414142 KRT28Q7Z3Y7 464 aa17.61■□□□□ 0.41
SNHG17-202ENST00000414142 KCNH5Q8NCM2 988 aa17.61■□□□□ 0.41
SNHG17-202ENST00000414142 IGSF1Q8N6C5 1336 aa17.61■□□□□ 0.41
SNHG17-202ENST00000414142 LTN1O94822 1766 aa17.61■□□□□ 0.41
SNHG17-202ENST00000414142 ZBTB7CA1YPR0 619 aa17.6■□□□□ 0.41
SNHG17-202ENST00000414142 ZNF853P0CG23 659 aa17.6■□□□□ 0.41
SNHG17-202ENST00000414142 CFAP44Q96MT7 982 aa17.6■□□□□ 0.41
SNHG17-202ENST00000414142 TNNQ9UQP3 1299 aa17.6■□□□□ 0.41
SNHG17-202ENST00000414142 CLUAP1Q96AJ1 413 aa17.6■□□□□ 0.41
SNHG17-202ENST00000414142 MBIPQ9NS73 344 aa17.6■□□□□ 0.41
SNHG17-202ENST00000414142 PLEKHG5O94827 1062 aa17.59■□□□□ 0.41
SNHG17-202ENST00000414142 KIF1AQ12756 1690 aa17.59■□□□□ 0.41
SNHG17-202ENST00000414142 RTL1A6NKG5 1358 aa17.59■□□□□ 0.41
SNHG17-202ENST00000414142 MS4A1P11836 297 aa17.59■□□□□ 0.41
SNHG17-202ENST00000414142 CENPQQ7L2Z9 268 aaPredicted RBP17.59■□□□□ 0.41
SNHG17-202ENST00000414142 KDRP35968 1356 aa17.58■□□□□ 0.4
SNHG17-202ENST00000414142 RLBP1P12271 317 aa17.58■□□□□ 0.4
SNHG17-202ENST00000414142 FTSJ3Q8IY81 847 aaKnown RBP17.58■□□□□ 0.4
SNHG17-202ENST00000414142 IP6K1Q92551 441 aa17.58■□□□□ 0.4
SNHG17-202ENST00000414142 NCOA3Q9Y6Q9 1424 aa17.58■□□□□ 0.4
SNHG17-202ENST00000414142 ALDH1L2Q3SY69 923 aa17.57■□□□□ 0.4
SNHG17-202ENST00000414142 ZNF428Q96B54 188 aa17.57■□□□□ 0.4
SNHG17-202ENST00000414142 NFAT5O94916 1531 aa17.57■□□□□ 0.4
SNHG17-202ENST00000414142 KDM2BQ8NHM5 1336 aa17.57■□□□□ 0.4
SNHG17-202ENST00000414142 MTHFSDQ2M296 383 aaKnown RBP17.57■□□□□ 0.4
SNHG17-202ENST00000414142 MCM10Q7L590 875 aa17.57■□□□□ 0.4
SNHG17-202ENST00000414142 DZIP1LQ8IYY4 767 aaKnown RBP17.57■□□□□ 0.4
SNHG17-202ENST00000414142 NOB1Q9ULX3 412 aaKnown RBP17.56■□□□□ 0.4
SNHG17-202ENST00000414142 MST1RQ04912 1400 aa17.56■□□□□ 0.4
SNHG17-202ENST00000414142 VAMP4O75379 141 aa17.56■□□□□ 0.4
SNHG17-202ENST00000414142 GAS2L2Q8NHY3 880 aa17.56■□□□□ 0.4
SNHG17-202ENST00000414142 RTF1Q92541 710 aaKnown RBP17.56■□□□□ 0.4
SNHG17-202ENST00000414142 ANP32EQ9BTT0 268 aa17.56■□□□□ 0.4
SNHG17-202ENST00000414142 DCCP43146 1447 aa17.55■□□□□ 0.4
SNHG17-202ENST00000414142 LMTK3Q96Q04 1460 aa17.55■□□□□ 0.4
SNHG17-202ENST00000414142 ELL2O00472 640 aaPredicted RBP17.55■□□□□ 0.4
SNHG17-202ENST00000414142 TCERG1O14776 1098 aaKnown RBP17.55■□□□□ 0.4
SNHG17-202ENST00000414142 IPO8O15397 1037 aaKnown RBP17.55■□□□□ 0.4
SNHG17-202ENST00000414142 GCP02774 474 aa17.55■□□□□ 0.4
SNHG17-202ENST00000414142 CADPS2Q86UW7 1296 aa17.55■□□□□ 0.4
SNHG17-202ENST00000414142 KIF16BQ96L93 1317 aa17.55■□□□□ 0.4
SNHG17-202ENST00000414142 AAMPQ13685 434 aa17.54■□□□□ 0.4
SNHG17-202ENST00000414142 TSPYL6Q8N831 410 aa17.54■□□□□ 0.4
SNHG17-202ENST00000414142 TRPM3Q9HCF6 1732 aaPredicted RBP17.54■□□□□ 0.4
SNHG17-202ENST00000414142 TWISTNBQ3B726 338 aaPredicted RBP17.54■□□□□ 0.4
SNHG17-202ENST00000414142 ATF7IPQ6VMQ6 1270 aa17.54■□□□□ 0.4
SNHG17-202ENST00000414142 TRIM27P14373 513 aa17.53■□□□□ 0.4
SNHG17-202ENST00000414142 MVPQ14764 893 aaKnown RBP17.53■□□□□ 0.4
SNHG17-202ENST00000414142 MSH6P52701 1360 aa17.53■□□□□ 0.4
SNHG17-202ENST00000414142 C8orf58Q8NAV2 365 aa17.53■□□□□ 0.4
SNHG17-202ENST00000414142 STRCQ7RTU9 1775 aa17.52■□□□□ 0.4
SNHG17-202ENST00000414142 CHL1O00533 1208 aa17.52■□□□□ 0.4
SNHG17-202ENST00000414142 USHBP1Q8N6Y0 703 aa17.52■□□□□ 0.4
SNHG17-202ENST00000414142 SLIT3O75094 1523 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms