RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 TTC21BQ7Z4L5 1316 aa17.55■□□□□ 0.4
LIMS2-210ENST00000413578 KCNQ2O43526 872 aa17.55■□□□□ 0.4
LIMS2-210ENST00000413578 TOM1L2Q6ZVM7 507 aa17.55■□□□□ 0.4
LIMS2-210ENST00000413578 MARCH10Q8NA82 808 aaPredicted RBP17.55■□□□□ 0.4
LIMS2-210ENST00000413578 BCL11BQ9C0K0 894 aaPredicted RBP17.55■□□□□ 0.4
LIMS2-210ENST00000413578 SPON1Q9HCB6 807 aa17.55■□□□□ 0.4
LIMS2-210ENST00000413578 ZBTB7CA1YPR0 619 aa17.54■□□□□ 0.4
LIMS2-210ENST00000413578 PROM2Q8N271 834 aa17.53■□□□□ 0.4
LIMS2-210ENST00000413578 ZNF692Q9BU19 519 aaPredicted RBP17.53■□□□□ 0.4
LIMS2-210ENST00000413578 CDCA7Q9BWT1 371 aaPredicted RBP17.53■□□□□ 0.4
LIMS2-210ENST00000413578 CARD10Q9BWT7 1032 aa17.53■□□□□ 0.4
LIMS2-210ENST00000413578 TRPM1Q7Z4N2 1603 aa17.53■□□□□ 0.4
LIMS2-210ENST00000413578 NINLQ9Y2I6 1382 aa17.53■□□□□ 0.4
LIMS2-210ENST00000413578 NFAT5O94916 1531 aa17.52■□□□□ 0.4
LIMS2-210ENST00000413578 KCNH5Q8NCM2 988 aa17.52■□□□□ 0.4
LIMS2-210ENST00000413578 TTC21AQ8NDW8 1320 aa17.51■□□□□ 0.39
LIMS2-210ENST00000413578 SBF2Q86WG5 1849 aa17.51■□□□□ 0.39
LIMS2-210ENST00000413578 WNK3Q9BYP7 1800 aa17.5■□□□□ 0.39
LIMS2-210ENST00000413578 CASZ1Q86V15 1759 aa17.49■□□□□ 0.39
LIMS2-210ENST00000413578 ABCC6O95255 1503 aa17.49■□□□□ 0.39
LIMS2-210ENST00000413578 ROCK2O75116 1388 aaKnown RBP17.49■□□□□ 0.39
LIMS2-210ENST00000413578 SIN3AQ96ST3 1273 aa17.48■□□□□ 0.39
LIMS2-210ENST00000413578 PDGFDQ9GZP0 370 aaPredicted RBP17.48■□□□□ 0.39
LIMS2-210ENST00000413578 YY1P25490 414 aa17.47■□□□□ 0.39
LIMS2-210ENST00000413578 PPP1R1BQ9UD71 204 aaPredicted RBP17.47■□□□□ 0.39
LIMS2-210ENST00000413578 USP31Q70CQ4 1352 aa17.47■□□□□ 0.39
LIMS2-210ENST00000413578 CCDC7Q96M83 1385 aa17.47■□□□□ 0.39
LIMS2-210ENST00000413578 SBNO2Q9Y2G9 1366 aa17.47■□□□□ 0.39
LIMS2-210ENST00000413578 AKAP12Q02952 1782 aa17.47■□□□□ 0.39
LIMS2-210ENST00000413578 TNS2Q63HR2 1409 aa17.47■□□□□ 0.39
LIMS2-210ENST00000413578 CD163L1Q9NR16 1453 aa17.45■□□□□ 0.38
LIMS2-210ENST00000413578 KTN1Q86UP2 1357 aaKnown RBP17.45■□□□□ 0.38
LIMS2-210ENST00000413578 SOX12O15370 315 aa17.45■□□□□ 0.38
LIMS2-210ENST00000413578 PTGER2P43116 358 aa17.45■□□□□ 0.38
LIMS2-210ENST00000413578 EXOC5O00471 708 aa17.44■□□□□ 0.38
LIMS2-210ENST00000413578 CSB-PGBD3P0DP91 1061 aa17.44■□□□□ 0.38
LIMS2-210ENST00000413578 TXNRD1Q16881 649 aa17.44■□□□□ 0.38
LIMS2-210ENST00000413578 ERBB3P21860 1342 aa17.44■□□□□ 0.38
LIMS2-210ENST00000413578 USP54Q70EL1 1684 aa17.42■□□□□ 0.38
LIMS2-210ENST00000413578 MON2Q7Z3U7 1717 aa17.41■□□□□ 0.38
LIMS2-210ENST00000413578 RGPD5Q99666 1765 aa17.41■□□□□ 0.38
LIMS2-210ENST00000413578 ZBTB7AO95365 584 aa17.41■□□□□ 0.38
LIMS2-210ENST00000413578 SLC15A2Q16348 729 aa17.41■□□□□ 0.38
LIMS2-210ENST00000413578 SGIP1Q9BQI5 828 aa17.4■□□□□ 0.38
LIMS2-210ENST00000413578 UTRNP46939 3433 aa17.4■□□□□ 0.38
LIMS2-210ENST00000413578 NME9Q86XW9 330 aa17.39■□□□□ 0.37
LIMS2-210ENST00000413578 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.39■□□□□ 0.37
LIMS2-210ENST00000413578 STK32BQ9NY57 414 aa17.39■□□□□ 0.37
LIMS2-210ENST00000413578 NEUROD1Q13562 356 aa17.38■□□□□ 0.37
LIMS2-210ENST00000413578 MYOM1P52179 1685 aa17.38■□□□□ 0.37
LIMS2-210ENST00000413578 NHSQ6T4R5 1651 aa17.38■□□□□ 0.37
LIMS2-210ENST00000413578 PAPPAQ13219 1627 aa17.37■□□□□ 0.37
LIMS2-210ENST00000413578 IL2RBP14784 551 aa17.36■□□□□ 0.37
LIMS2-210ENST00000413578 MTFR1LQ9H019 292 aa17.36■□□□□ 0.37
LIMS2-210ENST00000413578 NLRP2Q9NX02 1062 aa17.36■□□□□ 0.37
LIMS2-210ENST00000413578 ATF5Q9Y2D1 282 aaPredicted RBP17.36■□□□□ 0.37
LIMS2-210ENST00000413578 EDC4Q6P2E9 1401 aaKnown RBP17.36■□□□□ 0.37
LIMS2-210ENST00000413578 DCAF8L1A6NGE4 600 aa17.35■□□□□ 0.37
LIMS2-210ENST00000413578 ACSBG1Q96GR2 724 aa17.35■□□□□ 0.37
LIMS2-210ENST00000413578 ANKRD24Q8TF21 1146 aa17.34■□□□□ 0.37
LIMS2-210ENST00000413578 SYT17Q9BSW7 474 aa17.34■□□□□ 0.37
LIMS2-210ENST00000413578 CARD11Q9BXL7 1154 aa17.34■□□□□ 0.37
LIMS2-210ENST00000413578 SLC12A5Q9H2X9 1139 aa17.34■□□□□ 0.37
LIMS2-210ENST00000413578 A0A1W2PP64 1363 aa17.33■□□□□ 0.36
LIMS2-210ENST00000413578 PUS7Q96PZ0 661 aaKnown RBP17.33■□□□□ 0.36
LIMS2-210ENST00000413578 FHDC1Q9C0D6 1143 aaPredicted RBP17.33■□□□□ 0.36
LIMS2-210ENST00000413578 HDGFL2Q7Z4V5 671 aaPredicted RBP17.32■□□□□ 0.36
LIMS2-210ENST00000413578 LRRC4BQ9NT99 713 aa17.32■□□□□ 0.36
LIMS2-210ENST00000413578 MAP3K5Q99683 1374 aa17.31■□□□□ 0.36
LIMS2-210ENST00000413578 ZNF827Q17R98 1081 aa17.31■□□□□ 0.36
LIMS2-210ENST00000413578 TMC1Q8TDI8 760 aa17.3■□□□□ 0.36
LIMS2-210ENST00000413578 IP6K1Q92551 441 aa17.29■□□□□ 0.36
LIMS2-210ENST00000413578 TERF2IPQ9NYB0 399 aa17.29■□□□□ 0.36
LIMS2-210ENST00000413578 LTN1O94822 1766 aa17.29■□□□□ 0.36
LIMS2-210ENST00000413578 ZNF784Q8NCA9 323 aaPredicted RBP17.28■□□□□ 0.36
LIMS2-210ENST00000413578 AKT1S1Q96B36 256 aa17.28■□□□□ 0.36
LIMS2-210ENST00000413578 TESK2Q96S53 571 aa17.28■□□□□ 0.36
LIMS2-210ENST00000413578 BTAF1O14981 1849 aa17.28■□□□□ 0.36
LIMS2-210ENST00000413578 ARXQ96QS3 562 aa17.27■□□□□ 0.36
LIMS2-210ENST00000413578 SLC27A3Q5K4L6 730 aa17.26■□□□□ 0.35
LIMS2-210ENST00000413578 MAP3K19Q56UN5 1328 aa17.24■□□□□ 0.35
LIMS2-210ENST00000413578 NSD2O96028 1365 aa17.24■□□□□ 0.35
LIMS2-210ENST00000413578 SLC16A10Q8TF71 515 aa17.23■□□□□ 0.35
LIMS2-210ENST00000413578 ANKRD36BQ8N2N9 1353 aa17.23■□□□□ 0.35
LIMS2-210ENST00000413578 FAM208AQ9UK61 1670 aaKnown RBP17.23■□□□□ 0.35
LIMS2-210ENST00000413578 PNPLA7Q6ZV29 1317 aa17.22■□□□□ 0.35
LIMS2-210ENST00000413578 HOXC9P31274 260 aa17.22■□□□□ 0.35
LIMS2-210ENST00000413578 DDX54Q8TDD1 881 aaKnown RBP17.22■□□□□ 0.35
LIMS2-210ENST00000413578 FBLN1P23142 703 aa17.21■□□□□ 0.35
LIMS2-210ENST00000413578 MEGF6O75095 1541 aa17.21■□□□□ 0.34
LIMS2-210ENST00000413578 TONSLQ96HA7 1378 aa17.2■□□□□ 0.34
LIMS2-210ENST00000413578 ST20-MTHFSA0A0A6YYL1 179 aa17.2■□□□□ 0.34
LIMS2-210ENST00000413578 PRIM1P49642 420 aaKnown RBP17.2■□□□□ 0.34
LIMS2-210ENST00000413578 LTV1Q96GA3 475 aaPredicted RBP17.2■□□□□ 0.34
LIMS2-210ENST00000413578 COG3Q96JB2 828 aa17.2■□□□□ 0.34
LIMS2-210ENST00000413578 COL24A1Q17RW2 1714 aa17.2■□□□□ 0.34
LIMS2-210ENST00000413578 QSER1Q2KHR3 1735 aa17.19■□□□□ 0.34
LIMS2-210ENST00000413578 RTL1A6NKG5 1358 aa17.19■□□□□ 0.34
LIMS2-210ENST00000413578 KCNQ4P56696 695 aa17.18■□□□□ 0.34
LIMS2-210ENST00000413578 ZCRB1Q8TBF4 217 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms