RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 PRKAR2BP31323 418 aa21.92■■□□□ 1.1
SDCBP-202ENST00000413219 IFT57Q9NWB7 429 aa21.92■■□□□ 1.1
SDCBP-202ENST00000413219 KIF24Q5T7B8 1368 aa21.92■■□□□ 1.1
SDCBP-202ENST00000413219 MINK1Q8N4C8 1332 aaPredicted RBP21.92■■□□□ 1.1
SDCBP-202ENST00000413219 GOLGA6L22H0YM25 854 aa21.92■■□□□ 1.1
SDCBP-202ENST00000413219 CDC45O75419 566 aa21.92■■□□□ 1.1
SDCBP-202ENST00000413219 GNAI1P63096 354 aa21.92■■□□□ 1.1
SDCBP-202ENST00000413219 GAS2L3Q86XJ1 694 aa21.92■■□□□ 1.1
SDCBP-202ENST00000413219 TRIM44Q96DX7 344 aaPredicted RBP21.92■■□□□ 1.1
SDCBP-202ENST00000413219 ARHGEF40Q8TER5 1519 aa21.92■■□□□ 1.1
SDCBP-202ENST00000413219 PRAM1Q96QH2 718 aa21.91■■□□□ 1.1
SDCBP-202ENST00000413219 CD2BP2O95400 341 aaKnown RBP21.9■■□□□ 1.1
SDCBP-202ENST00000413219 TMEM131LA2VDJ0 1609 aa21.9■■□□□ 1.1
SDCBP-202ENST00000413219 ZNF853P0CG23 659 aa21.89■■□□□ 1.1
SDCBP-202ENST00000413219 SIRT2Q8IXJ6 389 aa21.89■■□□□ 1.1
SDCBP-202ENST00000413219 DIP2CQ9Y2E4 1556 aa21.89■■□□□ 1.1
SDCBP-202ENST00000413219 POLKQ9UBT6 870 aa21.88■■□□□ 1.09
SDCBP-202ENST00000413219 ATP7BP35670 1465 aa21.88■■□□□ 1.09
SDCBP-202ENST00000413219 NEO1Q92859 1461 aa21.88■■□□□ 1.09
SDCBP-202ENST00000413219 ERBB4Q15303 1308 aa21.88■■□□□ 1.09
SDCBP-202ENST00000413219 API5Q9BZZ5 524 aaKnown RBP21.87■■□□□ 1.09
SDCBP-202ENST00000413219 YEATS2Q9ULM3 1422 aa21.87■■□□□ 1.09
SDCBP-202ENST00000413219 NPM1P06748 294 aaKnown RBP eCLIP21.87■■□□□ 1.09
SDCBP-202ENST00000413219 CCDC173Q0VFZ6 552 aa21.87■■□□□ 1.09
SDCBP-202ENST00000413219 KLHL40Q2TBA0 621 aa21.87■■□□□ 1.09
SDCBP-202ENST00000413219 CDK19Q9BWU1 502 aa21.87■■□□□ 1.09
SDCBP-202ENST00000413219 RABEP1Q15276 862 aa21.86■■□□□ 1.09
SDCBP-202ENST00000413219 GAS2L2Q8NHY3 880 aa21.86■■□□□ 1.09
SDCBP-202ENST00000413219 C1orf115Q9H7X2 142 aa21.86■■□□□ 1.09
SDCBP-202ENST00000413219 PPP1R9BQ96SB3 815 aa21.86■■□□□ 1.09
SDCBP-202ENST00000413219 RRP9O43818 475 aaKnown RBP21.85■■□□□ 1.09
SDCBP-202ENST00000413219 SSFA2P28290 1259 aa21.85■■□□□ 1.09
SDCBP-202ENST00000413219 CABP1Q9NZU7 370 aa21.85■■□□□ 1.09
SDCBP-202ENST00000413219 LMOD3Q0VAK6 560 aa21.84■■□□□ 1.09
SDCBP-202ENST00000413219 TSPYL6Q8N831 410 aa21.84■■□□□ 1.09
SDCBP-202ENST00000413219 MYO5BQ9ULV0 1848 aa21.84■■□□□ 1.09
SDCBP-202ENST00000413219 GLIPR1L2Q4G1C9 344 aa21.84■■□□□ 1.09
SDCBP-202ENST00000413219 PHACTR3Q96KR7 559 aa21.84■■□□□ 1.09
SDCBP-202ENST00000413219 RBM42Q9BTD8 480 aaKnown RBP21.84■■□□□ 1.09
SDCBP-202ENST00000413219 ALKQ9UM73 1620 aa21.83■■□□□ 1.09
SDCBP-202ENST00000413219 PREX1Q8TCU6 1659 aa21.83■■□□□ 1.09
SDCBP-202ENST00000413219 BAG4O95429 457 aaKnown RBP21.83■■□□□ 1.09
SDCBP-202ENST00000413219 MBIPQ9NS73 344 aa21.83■■□□□ 1.09
SDCBP-202ENST00000413219 TWISTNBQ3B726 338 aaPredicted RBP21.83■■□□□ 1.08
SDCBP-202ENST00000413219 DLC1Q96QB1 1528 aa21.82■■□□□ 1.08
SDCBP-202ENST00000413219 NUCB2P80303 420 aa21.82■■□□□ 1.08
SDCBP-202ENST00000413219 FOXD4L1Q9NU39 408 aa21.82■■□□□ 1.08
SDCBP-202ENST00000413219 CDK12Q9NYV4 1490 aaPredicted RBP21.82■■□□□ 1.08
SDCBP-202ENST00000413219 GSPT1P15170 499 aaKnown RBP21.81■■□□□ 1.08
SDCBP-202ENST00000413219 PLEKHM2Q8IWE5 1019 aa21.81■■□□□ 1.08
SDCBP-202ENST00000413219 DCTPP1Q9H773 170 aa21.81■■□□□ 1.08
SDCBP-202ENST00000413219 DDX49Q9Y6V7 483 aaKnown RBP21.8■■□□□ 1.08
SDCBP-202ENST00000413219 IL13P35225 146 aa21.79■■□□□ 1.08
SDCBP-202ENST00000413219 NASPP49321 788 aaPredicted RBP21.79■■□□□ 1.08
SDCBP-202ENST00000413219 TTC22Q5TAA0 569 aa21.79■■□□□ 1.08
SDCBP-202ENST00000413219 ANP32BQ92688 251 aaKnown RBP21.79■■□□□ 1.08
SDCBP-202ENST00000413219 THUMPD2Q9BTF0 503 aaKnown RBP21.79■■□□□ 1.08
SDCBP-202ENST00000413219 ZNF445P59923 1031 aa21.79■■□□□ 1.08
SDCBP-202ENST00000413219 TPM2P07951 284 aa21.78■■□□□ 1.08
SDCBP-202ENST00000413219 HMOX1P09601 288 aa21.78■■□□□ 1.08
SDCBP-202ENST00000413219 HSP90AA2PQ14568 343 aaPredicted RBP21.78■■□□□ 1.08
SDCBP-202ENST00000413219 AATKQ6ZMQ8 1374 aa21.78■■□□□ 1.08
SDCBP-202ENST00000413219 CPSF1Q10570 1443 aaKnown RBP21.78■■□□□ 1.08
SDCBP-202ENST00000413219 CYP2E1P05181 493 aaPredicted RBP21.78■■□□□ 1.08
SDCBP-202ENST00000413219 KNDC1Q76NI1 1749 aa21.77■■□□□ 1.08
SDCBP-202ENST00000413219 INTS3Q68E01 1043 aaKnown RBP21.77■■□□□ 1.08
SDCBP-202ENST00000413219 CWC22Q9HCG8 908 aaKnown RBP21.77■■□□□ 1.08
SDCBP-202ENST00000413219 MAP2P11137 1827 aaKnown RBP21.77■■□□□ 1.08
SDCBP-202ENST00000413219 EDC4Q6P2E9 1401 aaKnown RBP21.77■■□□□ 1.07
SDCBP-202ENST00000413219 USP26Q9BXU7 913 aa21.76■■□□□ 1.07
SDCBP-202ENST00000413219 RIMS2Q9UQ26 1411 aa21.76■■□□□ 1.07
SDCBP-202ENST00000413219 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.76■■□□□ 1.07
SDCBP-202ENST00000413219 C8orf58Q8NAV2 365 aa21.76■■□□□ 1.07
SDCBP-202ENST00000413219 ZSCAN30Q86W11 494 aa21.75■■□□□ 1.07
SDCBP-202ENST00000413219 RAPGEF3O95398 923 aa21.75■■□□□ 1.07
SDCBP-202ENST00000413219 HAP1P54257 671 aaPredicted RBP21.75■■□□□ 1.07
SDCBP-202ENST00000413219 ANKRD44Q8N8A2 993 aa21.75■■□□□ 1.07
SDCBP-202ENST00000413219 ELL2O00472 640 aaPredicted RBP21.74■■□□□ 1.07
SDCBP-202ENST00000413219 HS1BP3Q53T59 392 aa21.73■■□□□ 1.07
SDCBP-202ENST00000413219 RPAP2Q8IXW5 612 aaPredicted RBP21.73■■□□□ 1.07
SDCBP-202ENST00000413219 RICTORQ6R327 1708 aa21.73■■□□□ 1.07
SDCBP-202ENST00000413219 ATP10DQ9P241 1426 aa21.73■■□□□ 1.07
SDCBP-202ENST00000413219 EMILIN1Q9Y6C2 1016 aa21.73■■□□□ 1.07
SDCBP-202ENST00000413219 CASC1Q6TDU7 716 aa21.72■■□□□ 1.07
SDCBP-202ENST00000413219 DLG5Q8TDM6 1919 aa21.72■■□□□ 1.07
SDCBP-202ENST00000413219 FBLN1P23142 703 aa21.71■■□□□ 1.07
SDCBP-202ENST00000413219 LMBRD1Q9NUN5 540 aa21.71■■□□□ 1.07
SDCBP-202ENST00000413219 MCTP1Q6DN14 999 aa21.7■■□□□ 1.06
SDCBP-202ENST00000413219 ST18O60284 1047 aa21.7■■□□□ 1.06
SDCBP-202ENST00000413219 TERF1P54274 439 aa21.68■■□□□ 1.06
SDCBP-202ENST00000413219 ZSCAN23Q3MJ62 389 aa21.68■■□□□ 1.06
SDCBP-202ENST00000413219 RGS12O14924 1447 aa21.68■■□□□ 1.06
SDCBP-202ENST00000413219 OFD1O75665 1012 aa21.68■■□□□ 1.06
SDCBP-202ENST00000413219 SENP3Q9H4L4 574 aaPredicted RBP21.68■■□□□ 1.06
SDCBP-202ENST00000413219 REC8O95072 547 aa21.67■■□□□ 1.06
SDCBP-202ENST00000413219 CEP85Q6P2H3 762 aa21.67■■□□□ 1.06
SDCBP-202ENST00000413219 SDSP20132 328 aa21.67■■□□□ 1.06
SDCBP-202ENST00000413219 MSNP26038 577 aaKnown RBP21.67■■□□□ 1.06
SDCBP-202ENST00000413219 RIMBP3CA6NJZ7 1639 aa21.66■■□□□ 1.06
SDCBP-202ENST00000413219 RIMBP3BA6NNM3 1639 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms