RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 RTN4Q9NQC3 1192 aaKnown RBP20.96■□□□□ 0.95
LIMS2-208ENST00000410011 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.95■□□□□ 0.94
LIMS2-208ENST00000410011 KIF24Q5T7B8 1368 aa20.95■□□□□ 0.94
LIMS2-208ENST00000410011 ABCC4O15439 1325 aa20.94■□□□□ 0.94
LIMS2-208ENST00000410011 WASLO00401 505 aaPredicted RBP20.94■□□□□ 0.94
LIMS2-208ENST00000410011 WAPLQ7Z5K2 1190 aa20.94■□□□□ 0.94
LIMS2-208ENST00000410011 HSCBQ8IWL3 235 aa20.94■□□□□ 0.94
LIMS2-208ENST00000410011 FAM43AQ8N2R8 423 aa20.94■□□□□ 0.94
LIMS2-208ENST00000410011 CFAP44Q96MT7 982 aa20.93■□□□□ 0.94
LIMS2-208ENST00000410011 DDIT3P35638 169 aa20.93■□□□□ 0.94
LIMS2-208ENST00000410011 LNPKQ9C0E8 428 aa20.92■□□□□ 0.94
LIMS2-208ENST00000410011 ZNF692Q9BU19 519 aaPredicted RBP20.92■□□□□ 0.94
LIMS2-208ENST00000410011 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.91■□□□□ 0.94
LIMS2-208ENST00000410011 SENP3Q9H4L4 574 aaPredicted RBP20.9■□□□□ 0.94
LIMS2-208ENST00000410011 MBIPQ9NS73 344 aa20.9■□□□□ 0.94
LIMS2-208ENST00000410011 EIF5BO60841 1220 aaKnown RBP20.9■□□□□ 0.94
LIMS2-208ENST00000410011 API5Q9BZZ5 524 aaKnown RBP20.9■□□□□ 0.94
LIMS2-208ENST00000410011 CIZ1Q9ULV3 898 aaPredicted RBP20.9■□□□□ 0.94
LIMS2-208ENST00000410011 TECPR2O15040 1411 aa20.9■□□□□ 0.94
LIMS2-208ENST00000410011 HMOX1P09601 288 aa20.89■□□□□ 0.94
LIMS2-208ENST00000410011 EMILIN1Q9Y6C2 1016 aa20.89■□□□□ 0.94
LIMS2-208ENST00000410011 FSD2A1L4K1 749 aa20.89■□□□□ 0.93
LIMS2-208ENST00000410011 TSPYL6Q8N831 410 aa20.89■□□□□ 0.93
LIMS2-208ENST00000410011 NRXN3Q9Y4C0 1643 aa20.89■□□□□ 0.93
LIMS2-208ENST00000410011 FBLN1P23142 703 aa20.88■□□□□ 0.93
LIMS2-208ENST00000410011 MON2Q7Z3U7 1717 aa20.88■□□□□ 0.93
LIMS2-208ENST00000410011 TWISTNBQ3B726 338 aaPredicted RBP20.88■□□□□ 0.93
LIMS2-208ENST00000410011 CCDC61Q9Y6R9 512 aa20.88■□□□□ 0.93
LIMS2-208ENST00000410011 KNDC1Q76NI1 1749 aa20.87■□□□□ 0.93
LIMS2-208ENST00000410011 ANKRD45Q5TZF3 282 aa20.87■□□□□ 0.93
LIMS2-208ENST00000410011 COG3Q96JB2 828 aa20.87■□□□□ 0.93
LIMS2-208ENST00000410011 DDX11L8A8MPP1 907 aa20.86■□□□□ 0.93
LIMS2-208ENST00000410011 NME9Q86XW9 330 aa20.86■□□□□ 0.93
LIMS2-208ENST00000410011 SIRT2Q8IXJ6 389 aa20.86■□□□□ 0.93
LIMS2-208ENST00000410011 HAP1P54257 671 aaPredicted RBP20.86■□□□□ 0.93
LIMS2-208ENST00000410011 NUDT16Q96DE0 195 aaKnown RBP20.86■□□□□ 0.93
LIMS2-208ENST00000410011 THUMPD2Q9BTF0 503 aaKnown RBP20.86■□□□□ 0.93
LIMS2-208ENST00000410011 KIF2CQ99661 725 aa20.84■□□□□ 0.93
LIMS2-208ENST00000410011 ISY1Q9ULR0 285 aaKnown RBP20.84■□□□□ 0.93
LIMS2-208ENST00000410011 C3P01024 1663 aa20.83■□□□□ 0.93
LIMS2-208ENST00000410011 DIP2BQ9P265 1576 aa20.83■□□□□ 0.93
LIMS2-208ENST00000410011 METP08581 1390 aa20.83■□□□□ 0.93
LIMS2-208ENST00000410011 TRAK2O60296 914 aa20.83■□□□□ 0.93
LIMS2-208ENST00000410011 HDGFP51858 240 aaKnown RBP20.83■□□□□ 0.93
LIMS2-208ENST00000410011 SPRYD3Q8NCJ5 442 aa20.83■□□□□ 0.93
LIMS2-208ENST00000410011 DLG5Q8TDM6 1919 aa20.83■□□□□ 0.93
LIMS2-208ENST00000410011 GOLGA6L3A6NEY3 463 aa20.83■□□□□ 0.92
LIMS2-208ENST00000410011 AKAP12Q02952 1782 aa20.83■□□□□ 0.92
LIMS2-208ENST00000410011 CPS1P31327 1500 aa20.82■□□□□ 0.92
LIMS2-208ENST00000410011 C8orf58Q8NAV2 365 aa20.82■□□□□ 0.92
LIMS2-208ENST00000410011 NRKQ7Z2Y5 1582 aa20.81■□□□□ 0.92
LIMS2-208ENST00000410011 FAM69CQ0P6D2 419 aa20.81■□□□□ 0.92
LIMS2-208ENST00000410011 INTS3Q68E01 1043 aaKnown RBP20.81■□□□□ 0.92
LIMS2-208ENST00000410011 TBC1D9Q6ZT07 1266 aa20.81■□□□□ 0.92
LIMS2-208ENST00000410011 DCTPP1Q9H773 170 aa20.8■□□□□ 0.92
LIMS2-208ENST00000410011 PTMSP20962 102 aa20.79■□□□□ 0.92
LIMS2-208ENST00000410011 XRCC6P12956 609 aaKnown RBP eCLIP20.78■□□□□ 0.92
LIMS2-208ENST00000410011 C1orf115Q9H7X2 142 aa20.78■□□□□ 0.92
LIMS2-208ENST00000410011 ZRANB1Q9UGI0 708 aa20.78■□□□□ 0.92
LIMS2-208ENST00000410011 KIAA0232Q92628 1395 aa20.78■□□□□ 0.92
LIMS2-208ENST00000410011 CDC45O75419 566 aa20.78■□□□□ 0.92
LIMS2-208ENST00000410011 RAB3GAP1Q15042 981 aa20.78■□□□□ 0.92
LIMS2-208ENST00000410011 ANO8Q9HCE9 1232 aaPredicted RBP20.78■□□□□ 0.92
LIMS2-208ENST00000410011 ELL2O00472 640 aaPredicted RBP20.77■□□□□ 0.92
LIMS2-208ENST00000410011 TXNDC2Q86VQ3 553 aa20.77■□□□□ 0.92
LIMS2-208ENST00000410011 ITSN1Q15811 1721 aa20.77■□□□□ 0.91
LIMS2-208ENST00000410011 HSP90AB1P08238 724 aaKnown RBP20.76■□□□□ 0.91
LIMS2-208ENST00000410011 RRS1Q15050 365 aaKnown RBP20.76■□□□□ 0.91
LIMS2-208ENST00000410011 CHL1O00533 1208 aa20.76■□□□□ 0.91
LIMS2-208ENST00000410011 MRE11P49959 708 aa20.76■□□□□ 0.91
LIMS2-208ENST00000410011 RPAP2Q8IXW5 612 aaPredicted RBP20.76■□□□□ 0.91
LIMS2-208ENST00000410011 GBP4Q96PP9 640 aa20.76■□□□□ 0.91
LIMS2-208ENST00000410011 K7ELQ4 463 aaPredicted RBP20.75■□□□□ 0.91
LIMS2-208ENST00000410011 PLEKHM2Q8IWE5 1019 aa20.75■□□□□ 0.91
LIMS2-208ENST00000410011 SKOR2Q2VWA4 1001 aaPredicted RBP20.75■□□□□ 0.91
LIMS2-208ENST00000410011 TNPO1Q92973 898 aaKnown RBP20.75■□□□□ 0.91
LIMS2-208ENST00000410011 CYB5RLQ6IPT4 315 aa20.74■□□□□ 0.91
LIMS2-208ENST00000410011 CLEC17AQ6ZS10 378 aa20.74■□□□□ 0.91
LIMS2-208ENST00000410011 ANKRD44Q8N8A2 993 aa20.74■□□□□ 0.91
LIMS2-208ENST00000410011 FAM83GA6ND36 823 aa20.73■□□□□ 0.91
LIMS2-208ENST00000410011 PTPRCP08575 1304 aa20.73■□□□□ 0.91
LIMS2-208ENST00000410011 PRR36Q9H6K5 1346 aa20.73■□□□□ 0.91
LIMS2-208ENST00000410011 RGS12O14924 1447 aa20.73■□□□□ 0.91
LIMS2-208ENST00000410011 EIF4A2Q14240 407 aaKnown RBP20.72■□□□□ 0.91
LIMS2-208ENST00000410011 PLEKHG3A1L390 1219 aa20.72■□□□□ 0.91
LIMS2-208ENST00000410011 OVOS2A0A0J9YW53 1432 aa20.72■□□□□ 0.91
LIMS2-208ENST00000410011 OVOS2Q6IE36 1432 aa20.72■□□□□ 0.91
LIMS2-208ENST00000410011 GSPT1P15170 499 aaKnown RBP20.71■□□□□ 0.91
LIMS2-208ENST00000410011 ATP10DQ9P241 1426 aa20.71■□□□□ 0.91
LIMS2-208ENST00000410011 TTC22Q5TAA0 569 aa20.71■□□□□ 0.91
LIMS2-208ENST00000410011 TTC21BQ7Z4L5 1316 aa20.71■□□□□ 0.91
LIMS2-208ENST00000410011 NCKAP5LQ9HCH0 1330 aa20.7■□□□□ 0.9
LIMS2-208ENST00000410011 USP31Q70CQ4 1352 aa20.7■□□□□ 0.9
LIMS2-208ENST00000410011 DCTN1Q14203 1278 aa20.7■□□□□ 0.9
LIMS2-208ENST00000410011 SULT6B1Q6IMI4 303 aa20.69■□□□□ 0.9
LIMS2-208ENST00000410011 GZF1Q9H116 711 aaPredicted RBP20.69■□□□□ 0.9
LIMS2-208ENST00000410011 RABEP1Q15276 862 aa20.69■□□□□ 0.9
LIMS2-208ENST00000410011 RGPD1P0DJD0 1748 aa20.68■□□□□ 0.9
LIMS2-208ENST00000410011 TMEM2Q9UHN6 1383 aa20.68■□□□□ 0.9
LIMS2-208ENST00000410011 CD2BP2O95400 341 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms