RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 ABTB2Q8N961 1025 aa7.28□□□□□ -1.24
EPHA4-202ENST00000409854 PNNQ9H307 717 aaKnown RBP7.28□□□□□ -1.24
EPHA4-202ENST00000409854 ARHGEF10O15013 1369 aa7.28□□□□□ -1.24
EPHA4-202ENST00000409854 EIF5BO60841 1220 aaKnown RBP7.28□□□□□ -1.24
EPHA4-202ENST00000409854 CDCA7LQ96GN5 454 aa7.28□□□□□ -1.24
EPHA4-202ENST00000409854 SALL2Q9Y467 1007 aaPredicted RBP7.28□□□□□ -1.24
EPHA4-202ENST00000409854 LMO7Q8WWI1 1683 aa7.28□□□□□ -1.24
EPHA4-202ENST00000409854 U2SURPO15042 1029 aaKnown RBP7.27□□□□□ -1.25
EPHA4-202ENST00000409854 GOLGA2Q08379 1002 aa7.27□□□□□ -1.25
EPHA4-202ENST00000409854 SUPT16HQ9Y5B9 1047 aaKnown RBP7.27□□□□□ -1.25
EPHA4-202ENST00000409854 TNS3Q68CZ2 1445 aa7.27□□□□□ -1.25
EPHA4-202ENST00000409854 PPM1GO15355 546 aaPredicted RBP7.27□□□□□ -1.25
EPHA4-202ENST00000409854 SLFN5Q08AF3 891 aa7.27□□□□□ -1.25
EPHA4-202ENST00000409854 EIF4A2Q14240 407 aaKnown RBP7.27□□□□□ -1.25
EPHA4-202ENST00000409854 DUSP27Q5VZP5 1158 aa7.27□□□□□ -1.25
EPHA4-202ENST00000409854 WWC1Q8IX03 1113 aa7.27□□□□□ -1.25
EPHA4-202ENST00000409854 VIRMAQ69YN4 1812 aaKnown RBP7.27□□□□□ -1.25
EPHA4-202ENST00000409854 FOXO3O43524 673 aa7.26□□□□□ -1.25
EPHA4-202ENST00000409854 KRT28Q7Z3Y7 464 aa7.26□□□□□ -1.25
EPHA4-202ENST00000409854 KDRP35968 1356 aa7.26□□□□□ -1.25
EPHA4-202ENST00000409854 PAK3O75914 559 aaPredicted RBP7.26□□□□□ -1.25
EPHA4-202ENST00000409854 LRRC37A3O60309 1634 aa7.26□□□□□ -1.25
EPHA4-202ENST00000409854 NPHP3Q7Z494 1330 aa7.26□□□□□ -1.25
EPHA4-202ENST00000409854 WDR63Q8IWG1 891 aa7.26□□□□□ -1.25
EPHA4-202ENST00000409854 KCNH5Q8NCM2 988 aa7.26□□□□□ -1.25
EPHA4-202ENST00000409854 NCAPD2Q15021 1401 aa7.26□□□□□ -1.25
EPHA4-202ENST00000409854 E9PSI1 815 aa7.25□□□□□ -1.25
EPHA4-202ENST00000409854 HOXC9P31274 260 aa7.25□□□□□ -1.25
EPHA4-202ENST00000409854 TMPOP42166 694 aaKnown RBP7.25□□□□□ -1.25
EPHA4-202ENST00000409854 HSP90AB2PQ58FF8 381 aa7.25□□□□□ -1.25
EPHA4-202ENST00000409854 ROBO1Q9Y6N7 1651 aa7.25□□□□□ -1.25
EPHA4-202ENST00000409854 IGSF1Q8N6C5 1336 aa7.25□□□□□ -1.25
EPHA4-202ENST00000409854 MAPK8IP3Q9UPT6 1336 aa7.25□□□□□ -1.25
EPHA4-202ENST00000409854 AHDC1Q5TGY3 1603 aaPredicted RBP7.25□□□□□ -1.25
EPHA4-202ENST00000409854 PRKAR2BP31323 418 aa7.25□□□□□ -1.25
EPHA4-202ENST00000409854 NUTM2GQ5VZR2 741 aa7.25□□□□□ -1.25
EPHA4-202ENST00000409854 BRINP3Q76B58 766 aa7.25□□□□□ -1.25
EPHA4-202ENST00000409854 SPINK5Q9NQ38 1064 aaPredicted RBP7.25□□□□□ -1.25
EPHA4-202ENST00000409854 COL22A1Q8NFW1 1626 aaPredicted RBP7.24□□□□□ -1.25
EPHA4-202ENST00000409854 TRIM35Q9UPQ4 493 aa7.24□□□□□ -1.25
EPHA4-202ENST00000409854 NEFLP07196 543 aa7.24□□□□□ -1.25
EPHA4-202ENST00000409854 ERICH6BQ5W0A0 696 aa7.24□□□□□ -1.25
EPHA4-202ENST00000409854 RRP7AQ9Y3A4 280 aaKnown RBP7.24□□□□□ -1.25
EPHA4-202ENST00000409854 XPCQ01831 940 aaPredicted RBP7.24□□□□□ -1.25
EPHA4-202ENST00000409854 RCAN3Q9UKA8 241 aa7.24□□□□□ -1.25
EPHA4-202ENST00000409854 SOS2Q07890 1332 aaPredicted RBP7.23□□□□□ -1.25
EPHA4-202ENST00000409854 IL16Q14005 1332 aa7.23□□□□□ -1.25
EPHA4-202ENST00000409854 SPATA31A3Q5VYP0 1347 aa7.23□□□□□ -1.25
EPHA4-202ENST00000409854 HMOX1P09601 288 aa7.23□□□□□ -1.25
EPHA4-202ENST00000409854 AMPHP49418 695 aa7.23□□□□□ -1.25
EPHA4-202ENST00000409854 FKBP8Q14318 412 aa7.23□□□□□ -1.25
EPHA4-202ENST00000409854 NFE2L2Q16236 605 aa7.23□□□□□ -1.25
EPHA4-202ENST00000409854 IP6K1Q92551 441 aa7.23□□□□□ -1.25
EPHA4-202ENST00000409854 SLAIN2Q9P270 581 aa7.23□□□□□ -1.25
EPHA4-202ENST00000409854 SOX12O15370 315 aa7.23□□□□□ -1.25
EPHA4-202ENST00000409854 ARHGEF25Q86VW2 580 aa7.23□□□□□ -1.25
EPHA4-202ENST00000409854 PHACTR3Q96KR7 559 aa7.23□□□□□ -1.25
EPHA4-202ENST00000409854 GCP02774 474 aa7.22□□□□□ -1.25
EPHA4-202ENST00000409854 RIPK4P57078 832 aa7.22□□□□□ -1.25
EPHA4-202ENST00000409854 NEUROD2Q15784 382 aa7.22□□□□□ -1.25
EPHA4-202ENST00000409854 SULT6B1Q6IMI4 303 aa7.22□□□□□ -1.25
EPHA4-202ENST00000409854 AEBP1Q8IUX7 1158 aa7.22□□□□□ -1.25
EPHA4-202ENST00000409854 DDX17Q92841 729 aaKnown RBP7.22□□□□□ -1.25
EPHA4-202ENST00000409854 ADAMTS7Q9UKP4 1686 aa7.22□□□□□ -1.25
EPHA4-202ENST00000409854 NEFMP07197 916 aa7.21□□□□□ -1.25
EPHA4-202ENST00000409854 RRP1P56182 461 aaKnown RBP7.21□□□□□ -1.25
EPHA4-202ENST00000409854 EYA1Q99502 592 aa7.21□□□□□ -1.25
EPHA4-202ENST00000409854 CPDO75976 1380 aa7.21□□□□□ -1.25
EPHA4-202ENST00000409854 PKD1L3Q7Z443 1732 aa7.21□□□□□ -1.26
EPHA4-202ENST00000409854 SIPA1L3O60292 1781 aaPredicted RBP7.2□□□□□ -1.26
EPHA4-202ENST00000409854 PHLPP1O60346 1717 aa7.2□□□□□ -1.26
EPHA4-202ENST00000409854 COL16A1Q07092 1604 aaPredicted RBP7.2□□□□□ -1.26
EPHA4-202ENST00000409854 LMOD3Q0VAK6 560 aa7.2□□□□□ -1.26
EPHA4-202ENST00000409854 MYH16Q9H6N6 1097 aa7.2□□□□□ -1.26
EPHA4-202ENST00000409854 PARP4Q9UKK3 1724 aaKnown RBP7.19□□□□□ -1.26
EPHA4-202ENST00000409854 KDM3BQ7LBC6 1761 aa7.19□□□□□ -1.26
EPHA4-202ENST00000409854 PLEKHG2Q9H7P9 1386 aa7.19□□□□□ -1.26
EPHA4-202ENST00000409854 FANCIQ9NVI1 1328 aa7.19□□□□□ -1.26
EPHA4-202ENST00000409854 CT47B1P0C2W7 299 aaPredicted RBP7.19□□□□□ -1.26
EPHA4-202ENST00000409854 SCN11AQ9UI33 1791 aa7.18□□□□□ -1.26
EPHA4-202ENST00000409854 ZNF853P0CG23 659 aa7.18□□□□□ -1.26
EPHA4-202ENST00000409854 CALD1Q05682 793 aaKnown RBP7.18□□□□□ -1.26
EPHA4-202ENST00000409854 WNK3Q9BYP7 1800 aa7.18□□□□□ -1.26
EPHA4-202ENST00000409854 COL14A1Q05707 1796 aaKnown RBP7.18□□□□□ -1.26
EPHA4-202ENST00000409854 IRX6P78412 446 aaPredicted RBP7.18□□□□□ -1.26
EPHA4-202ENST00000409854 LMOD2Q6P5Q4 547 aa7.18□□□□□ -1.26
EPHA4-202ENST00000409854 ERBB3P21860 1342 aa7.18□□□□□ -1.26
EPHA4-202ENST00000409854 IFT57Q9NWB7 429 aa7.18□□□□□ -1.26
EPHA4-202ENST00000409854 CRB1P82279 1406 aa7.18□□□□□ -1.26
EPHA4-202ENST00000409854 SHANK3Q9BYB0 1731 aa7.18□□□□□ -1.26
EPHA4-202ENST00000409854 NBPF6Q5VWK0 638 aa7.17□□□□□ -1.26
EPHA4-202ENST00000409854 NBPF4Q96M43 638 aa7.17□□□□□ -1.26
EPHA4-202ENST00000409854 AXIN2Q9Y2T1 843 aa7.17□□□□□ -1.26
EPHA4-202ENST00000409854 MTHFSDQ2M296 383 aaKnown RBP7.17□□□□□ -1.26
EPHA4-202ENST00000409854 GAS2L2Q8NHY3 880 aa7.17□□□□□ -1.26
EPHA4-202ENST00000409854 PLCH1Q4KWH8 1693 aa7.17□□□□□ -1.26
EPHA4-202ENST00000409854 HTATSF1O43719 755 aaKnown RBP7.17□□□□□ -1.26
EPHA4-202ENST00000409854 ANKRD24Q8TF21 1146 aa7.17□□□□□ -1.26
EPHA4-202ENST00000409854 CACNA1FO60840 1977 aa7.17□□□□□ -1.26
EPHA4-202ENST00000409854 KIAA0232Q92628 1395 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms