RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 PGPEP1Q9NXJ5 209 aa9.88□□□□□ -0.83
CLK1-203ENST00000409769 FAM181BA6NEQ2 426 aa9.87□□□□□ -0.83
CLK1-203ENST00000409769 PTK2Q05397 1052 aa9.87□□□□□ -0.83
CLK1-203ENST00000409769 LCE2CQ5TA81 110 aa9.87□□□□□ -0.83
CLK1-203ENST00000409769 ZBTB33Q86T24 672 aa9.87□□□□□ -0.83
CLK1-203ENST00000409769 PROCA1Q8NCQ7 364 aaPredicted RBP9.87□□□□□ -0.83
CLK1-203ENST00000409769 LRRN4Q8WUT4 740 aa9.87□□□□□ -0.83
CLK1-203ENST00000409769 TSEN34Q9BSV6 310 aaKnown RBP9.87□□□□□ -0.83
CLK1-203ENST00000409769 GOPCQ9HD26 462 aa9.87□□□□□ -0.83
CLK1-203ENST00000409769 BMP2P12643 396 aa9.86□□□□□ -0.83
CLK1-203ENST00000409769 DHX9Q08211 1270 aaKnown RBP9.86□□□□□ -0.83
CLK1-203ENST00000409769 MAN1A2O60476 641 aa9.85□□□□□ -0.83
CLK1-203ENST00000409769 AP1G2O75843 785 aa9.85□□□□□ -0.83
CLK1-203ENST00000409769 NR6A1Q15406 480 aa9.85□□□□□ -0.83
CLK1-203ENST00000409769 C6orf118Q5T5N4 469 aa9.84□□□□□ -0.83
CLK1-203ENST00000409769 GMPRP36959 345 aa9.83□□□□□ -0.84
CLK1-203ENST00000409769 KCTD15Q96SI1 283 aaPredicted RBP9.83□□□□□ -0.84
CLK1-203ENST00000409769 VSIG8P0DPA2 414 aa9.82□□□□□ -0.84
CLK1-203ENST00000409769 PRKCSHP14314 528 aaPredicted RBP9.82□□□□□ -0.84
CLK1-203ENST00000409769 NBPF20Q3BBV1 942 aa9.82□□□□□ -0.84
CLK1-203ENST00000409769 PPP1R26Q5T8A7 1209 aaPredicted RBP9.82□□□□□ -0.84
CLK1-203ENST00000409769 TRIM52Q96A61 297 aa9.82□□□□□ -0.84
CLK1-203ENST00000409769 SOS2Q07890 1332 aaPredicted RBP9.82□□□□□ -0.84
CLK1-203ENST00000409769 FBXO31Q5XUX0 539 aaPredicted RBP9.81□□□□□ -0.84
CLK1-203ENST00000409769 Q6ZVU0 165 aa9.81□□□□□ -0.84
CLK1-203ENST00000409769 USP17L8P0C7I0 530 aa9.8□□□□□ -0.84
CLK1-203ENST00000409769 VEGFBP49765 207 aa9.8□□□□□ -0.84
CLK1-203ENST00000409769 PCMTD1Q96MG8 357 aaPredicted RBP9.8□□□□□ -0.84
CLK1-203ENST00000409769 SOBPA7XYQ1 873 aa9.79□□□□□ -0.84
CLK1-203ENST00000409769 RFC5P40937 340 aa9.79□□□□□ -0.84
CLK1-203ENST00000409769 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.79□□□□□ -0.841e-6■■□□□ 12.3
CLK1-203ENST00000409769 TMEM259Q4ZIN3 620 aa9.79□□□□□ -0.84
CLK1-203ENST00000409769 ZSCAN1Q8NBB4 408 aa9.79□□□□□ -0.84
CLK1-203ENST00000409769 ADAM32Q8TC27 787 aa9.78□□□□□ -0.84
CLK1-203ENST00000409769 ERBB4Q15303 1308 aa9.78□□□□□ -0.84
CLK1-203ENST00000409769 TTLL8A6PVC2 850 aa9.77□□□□□ -0.85
CLK1-203ENST00000409769 INTS6LQ5JSJ4 861 aaKnown RBP9.77□□□□□ -0.85
CLK1-203ENST00000409769 SPINT1O43278 529 aa9.76□□□□□ -0.85
CLK1-203ENST00000409769 OCSTAMPQ9BR26 566 aa9.76□□□□□ -0.85
CLK1-203ENST00000409769 DNMT3LQ9UJW3 386 aa9.76□□□□□ -0.85
CLK1-203ENST00000409769 PPFIA3O75145 1194 aa9.74□□□□□ -0.85
CLK1-203ENST00000409769 DZIP3Q86Y13 1208 aaKnown RBP9.74□□□□□ -0.85
CLK1-203ENST00000409769 HMX1Q9NP08 348 aaPredicted RBP9.74□□□□□ -0.85
CLK1-203ENST00000409769 CBLBQ13191 982 aa9.73□□□□□ -0.85
CLK1-203ENST00000409769 SEPT12Q8IYM1 358 aa9.73□□□□□ -0.85
CLK1-203ENST00000409769 EPS8L1Q8TE68 723 aa9.73□□□□□ -0.85
CLK1-203ENST00000409769 NEUROD2Q15784 382 aa9.72□□□□□ -0.85
CLK1-203ENST00000409769 CCDC125Q86Z20 511 aa9.72□□□□□ -0.85
CLK1-203ENST00000409769 LORP23490 312 aaPredicted RBP9.7□□□□□ -0.86
CLK1-203ENST00000409769 ZNF592Q92610 1267 aa9.7□□□□□ -0.86
CLK1-203ENST00000409769 ESPNB1AK53 854 aa9.69□□□□□ -0.86
CLK1-203ENST00000409769 PTSQ03393 145 aa9.69□□□□□ -0.86
CLK1-203ENST00000409769 SOCS7O14512 581 aa9.68□□□□□ -0.86
CLK1-203ENST00000409769 TRIM34Q9BYJ4 488 aa9.68□□□□□ -0.86
CLK1-203ENST00000409769 ZBBXA8MT70 800 aa9.67□□□□□ -0.86
CLK1-203ENST00000409769 ADH1AP07327 375 aa9.67□□□□□ -0.86
CLK1-203ENST00000409769 BRPF1P55201 1214 aaPredicted RBP9.67□□□□□ -0.86
CLK1-203ENST00000409769 MCCD1P59942 119 aaPredicted RBP9.67□□□□□ -0.86
CLK1-203ENST00000409769 ZNF784Q8NCA9 323 aaPredicted RBP9.67□□□□□ -0.86
CLK1-203ENST00000409769 NANOS1Q8WY41 292 aaKnown RBP9.67□□□□□ -0.86
CLK1-203ENST00000409769 FIGNL2A6NMB9 653 aa9.66□□□□□ -0.86
CLK1-203ENST00000409769 ERVH48-1M5A8F1 160 aa9.66□□□□□ -0.86
CLK1-203ENST00000409769 RELBQ01201 579 aa9.66□□□□□ -0.86
CLK1-203ENST00000409769 APBB1O00213 710 aa9.65□□□□□ -0.86
CLK1-203ENST00000409769 BANK1Q8NDB2 785 aa9.65□□□□□ -0.86
CLK1-203ENST00000409769 IL27Q8NEV9 243 aa9.65□□□□□ -0.86
CLK1-203ENST00000409769 AGBL1Q96MI9 1066 aa9.65□□□□□ -0.86
CLK1-203ENST00000409769 POLMQ9NP87 494 aaPredicted RBP9.65□□□□□ -0.86
CLK1-203ENST00000409769 SLC35F4A4IF30 521 aa9.64□□□□□ -0.87
CLK1-203ENST00000409769 CCDC155Q8N6L0 562 aa9.64□□□□□ -0.87
CLK1-203ENST00000409769 TMPRSS4Q9NRS4 437 aa9.64□□□□□ -0.87
CLK1-203ENST00000409769 ZNF330Q9Y3S2 320 aaPredicted RBP9.64□□□□□ -0.87
CLK1-203ENST00000409769 LILRA1O75019 489 aa9.63□□□□□ -0.87
CLK1-203ENST00000409769 PTGIRP43119 386 aa9.63□□□□□ -0.87
CLK1-203ENST00000409769 CTSOP43234 321 aaPredicted RBP9.63□□□□□ -0.87
CLK1-203ENST00000409769 RAB15P59190 212 aa9.63□□□□□ -0.87
CLK1-203ENST00000409769 RNF20Q5VTR2 975 aa9.63□□□□□ -0.87
CLK1-203ENST00000409769 GJD4Q96KN9 370 aaPredicted RBP9.63□□□□□ -0.87
CLK1-203ENST00000409769 INSM2Q96T92 566 aaPredicted RBP9.63□□□□□ -0.87
CLK1-203ENST00000409769 RNF217Q8TC41 542 aa9.62□□□□□ -0.87
CLK1-203ENST00000409769 ZNF395Q9H8N7 513 aaPredicted RBP9.61□□□□□ -0.87
CLK1-203ENST00000409769 PCDHB9Q9Y5E1 797 aa9.61□□□□□ -0.87
CLK1-203ENST00000409769 FBXO45P0C2W1 286 aa9.6□□□□□ -0.87
CLK1-203ENST00000409769 ITGA6P23229 1130 aa9.6□□□□□ -0.87
CLK1-203ENST00000409769 ADD1P35611 737 aaKnown RBP9.59□□□□□ -0.87
CLK1-203ENST00000409769 NR1H3Q13133 447 aa9.59□□□□□ -0.87
CLK1-203ENST00000409769 GPC1P35052 558 aa9.58□□□□□ -0.88
CLK1-203ENST00000409769 SV2AQ7L0J3 742 aa9.58□□□□□ -0.88
CLK1-203ENST00000409769 LYSMD3Q7Z3D4 306 aa9.58□□□□□ -0.88
CLK1-203ENST00000409769 NDUFB9Q9Y6M9 179 aa9.58□□□□□ -0.88
CLK1-203ENST00000409769 ATP5J2-PTCD1G3V325 749 aa9.57□□□□□ -0.88
CLK1-203ENST00000409769 RNF144AP50876 292 aaPredicted RBP9.57□□□□□ -0.88
CLK1-203ENST00000409769 FOXD4L5Q5VV16 416 aaPredicted RBP9.57□□□□□ -0.88
CLK1-203ENST00000409769 KDF1Q8NAX2 398 aaPredicted RBP9.57□□□□□ -0.88
CLK1-203ENST00000409769 CYLDQ9NQC7 956 aa9.57□□□□□ -0.88
CLK1-203ENST00000409769 GIGYF1O75420 1035 aaPredicted RBP9.56□□□□□ -0.88
CLK1-203ENST00000409769 CC2D2BQ6DHV5 1058 aa9.56□□□□□ -0.88
CLK1-203ENST00000409769 GPR161Q8N6U8 529 aaKnown RBP9.56□□□□□ -0.88
CLK1-203ENST00000409769 CNTNAP3BQ96NU0 1288 aa9.56□□□□□ -0.88
CLK1-203ENST00000409769 COL25A1Q9BXS0 654 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms