RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 ADGRL3Q9HAR2 1447 aa26.68■■□□□ 1.86
USP39-203ENST00000409470 SULT6B1Q6IMI4 303 aa26.68■■□□□ 1.86
USP39-203ENST00000409470 C14orf37Q86TY3 774 aa26.68■■□□□ 1.86
USP39-203ENST00000409470 CENPQQ7L2Z9 268 aaPredicted RBP26.67■■□□□ 1.86
USP39-203ENST00000409470 COG6Q9Y2V7 657 aa26.67■■□□□ 1.86
USP39-203ENST00000409470 LAS1LQ9Y4W2 734 aaKnown RBP26.67■■□□□ 1.86
USP39-203ENST00000409470 PAK3O75914 559 aaPredicted RBP26.66■■□□□ 1.86
USP39-203ENST00000409470 LMOD3Q0VAK6 560 aa26.66■■□□□ 1.86
USP39-203ENST00000409470 KDM2BQ8NHM5 1336 aa26.66■■□□□ 1.86
USP39-203ENST00000409470 TCERG1O14776 1098 aaKnown RBP26.65■■□□□ 1.86
USP39-203ENST00000409470 AEBP1Q8IUX7 1158 aa26.65■■□□□ 1.86
USP39-203ENST00000409470 SBNO1A3KN83 1393 aa26.65■■□□□ 1.86
USP39-203ENST00000409470 ABTB2Q8N961 1025 aa26.65■■□□□ 1.86
USP39-203ENST00000409470 SMC4Q9NTJ3 1288 aa26.65■■□□□ 1.86
USP39-203ENST00000409470 FLT4P35916 1363 aa26.64■■□□□ 1.86
USP39-203ENST00000409470 AMPHP49418 695 aa26.64■■□□□ 1.86
USP39-203ENST00000409470 NUTM2GQ5VZR2 741 aa26.64■■□□□ 1.86
USP39-203ENST00000409470 THUMPD2Q9BTF0 503 aaKnown RBP26.64■■□□□ 1.86
USP39-203ENST00000409470 ESCO1Q5FWF5 840 aa26.61■■□□□ 1.85
USP39-203ENST00000409470 ZKSCAN2Q63HK3 967 aa26.61■■□□□ 1.85
USP39-203ENST00000409470 DLG5Q8TDM6 1919 aa26.6■■□□□ 1.85
USP39-203ENST00000409470 GNAI1P63096 354 aa26.6■■□□□ 1.85
USP39-203ENST00000409470 SSH1Q8WYL5 1049 aa26.6■■□□□ 1.85
USP39-203ENST00000409470 IFT57Q9NWB7 429 aa26.6■■□□□ 1.85
USP39-203ENST00000409470 TNNQ9UQP3 1299 aa26.6■■□□□ 1.85
USP39-203ENST00000409470 CLUAP1Q96AJ1 413 aa26.6■■□□□ 1.85
USP39-203ENST00000409470 RLBP1P12271 317 aa26.59■■□□□ 1.85
USP39-203ENST00000409470 RGPD1P0DJD0 1748 aa26.58■■□□□ 1.85
USP39-203ENST00000409470 ARHGEF10O15013 1369 aa26.58■■□□□ 1.84
USP39-203ENST00000409470 NWD1Q149M9 1564 aa26.57■■□□□ 1.84
USP39-203ENST00000409470 MS4A1P11836 297 aa26.57■■□□□ 1.84
USP39-203ENST00000409470 PSME1Q06323 249 aa26.57■■□□□ 1.84
USP39-203ENST00000409470 FTSJ3Q8IY81 847 aaKnown RBP26.57■■□□□ 1.84
USP39-203ENST00000409470 FAM83GA6ND36 823 aa26.56■■□□□ 1.84
USP39-203ENST00000409470 PROSER2Q86WR7 435 aaPredicted RBP26.56■■□□□ 1.84
USP39-203ENST00000409470 USP54Q70EL1 1684 aa26.56■■□□□ 1.84
USP39-203ENST00000409470 AAMPQ13685 434 aa26.55■■□□□ 1.84
USP39-203ENST00000409470 MARF1Q9Y4F3 1742 aaKnown RBP26.55■■□□□ 1.84
USP39-203ENST00000409470 DZIP1LQ8IYY4 767 aaKnown RBP26.55■■□□□ 1.84
USP39-203ENST00000409470 ZNF853P0CG23 659 aa26.54■■□□□ 1.84
USP39-203ENST00000409470 SKAP1Q86WV1 359 aa26.54■■□□□ 1.84
USP39-203ENST00000409470 CFAP44Q96MT7 982 aa26.54■■□□□ 1.84
USP39-203ENST00000409470 DCTN1Q14203 1278 aa26.53■■□□□ 1.84
USP39-203ENST00000409470 ALDH1L2Q3SY69 923 aa26.53■■□□□ 1.84
USP39-203ENST00000409470 MBIPQ9NS73 344 aa26.53■■□□□ 1.84
USP39-203ENST00000409470 KIF24Q5T7B8 1368 aa26.53■■□□□ 1.84
USP39-203ENST00000409470 ZNF428Q96B54 188 aa26.53■■□□□ 1.84
USP39-203ENST00000409470 HOXC9P31274 260 aa26.52■■□□□ 1.84
USP39-203ENST00000409470 NOB1Q9ULX3 412 aaKnown RBP26.52■■□□□ 1.84
USP39-203ENST00000409470 MVPQ14764 893 aaKnown RBP26.51■■□□□ 1.83
USP39-203ENST00000409470 KIF16BQ96L93 1317 aa26.51■■□□□ 1.83
USP39-203ENST00000409470 ATF7IPQ6VMQ6 1270 aa26.51■■□□□ 1.83
USP39-203ENST00000409470 TRIM27P14373 513 aa26.5■■□□□ 1.83
USP39-203ENST00000409470 EYA1Q99502 592 aa26.5■■□□□ 1.83
USP39-203ENST00000409470 IPO8O15397 1037 aaKnown RBP26.49■■□□□ 1.83
USP39-203ENST00000409470 IGSF1Q8N6C5 1336 aa26.49■■□□□ 1.83
USP39-203ENST00000409470 IGHDP01880 384 aa26.49■■□□□ 1.83
USP39-203ENST00000409470 ORAI2Q96SN7 254 aa26.49■■□□□ 1.83
USP39-203ENST00000409470 VAMP4O75379 141 aa26.48■■□□□ 1.83
USP39-203ENST00000409470 KDRP35968 1356 aa26.47■■□□□ 1.83
USP39-203ENST00000409470 TSPYL6Q8N831 410 aa26.46■■□□□ 1.83
USP39-203ENST00000409470 FOXO3O43524 673 aa26.46■■□□□ 1.83
USP39-203ENST00000409470 PDE4AP27815 886 aa26.46■■□□□ 1.83
USP39-203ENST00000409470 MCM10Q7L590 875 aa26.46■■□□□ 1.83
USP39-203ENST00000409470 ELL2O00472 640 aaPredicted RBP26.45■■□□□ 1.82
USP39-203ENST00000409470 TWISTNBQ3B726 338 aaPredicted RBP26.44■■□□□ 1.82
USP39-203ENST00000409470 LTV1Q96GA3 475 aaPredicted RBP26.44■■□□□ 1.82
USP39-203ENST00000409470 C19orf44Q9H6X5 657 aa26.44■■□□□ 1.82
USP39-203ENST00000409470 RTL1A6NKG5 1358 aa26.44■■□□□ 1.82
USP39-203ENST00000409470 ITPRIPQ8IWB1 547 aa26.44■■□□□ 1.82
USP39-203ENST00000409470 MTHFSDQ2M296 383 aaKnown RBP26.43■■□□□ 1.82
USP39-203ENST00000409470 BRPF1P55201 1214 aaPredicted RBP26.43■■□□□ 1.82
USP39-203ENST00000409470 XPCQ01831 940 aaPredicted RBP26.43■■□□□ 1.82
USP39-203ENST00000409470 KCNH5Q8NCM2 988 aa26.43■■□□□ 1.82
USP39-203ENST00000409470 PCDHB15Q9Y5E8 787 aa26.43■■□□□ 1.82
USP39-203ENST00000409470 C8orf58Q8NAV2 365 aa26.42■■□□□ 1.82
USP39-203ENST00000409470 DDX19BQ9UMR2 479 aa26.42■■□□□ 1.82
USP39-203ENST00000409470 RTF1Q92541 710 aaKnown RBP26.41■■□□□ 1.82
USP39-203ENST00000409470 LTN1O94822 1766 aa26.41■■□□□ 1.82
USP39-203ENST00000409470 GAS2L2Q8NHY3 880 aa26.41■■□□□ 1.82
USP39-203ENST00000409470 BACH2Q9BYV9 841 aa26.41■■□□□ 1.82
USP39-203ENST00000409470 MRPL50Q8N5N7 158 aaKnown RBP26.4■■□□□ 1.82
USP39-203ENST00000409470 NFAT5O94916 1531 aa26.39■■□□□ 1.82
USP39-203ENST00000409470 TMEM57Q8N5G2 664 aa26.39■■□□□ 1.82
USP39-203ENST00000409470 IP6K1Q92551 441 aa26.39■■□□□ 1.82
USP39-203ENST00000409470 ZBTB7CA1YPR0 619 aa26.39■■□□□ 1.81
USP39-203ENST00000409470 CHL1O00533 1208 aa26.39■■□□□ 1.81
USP39-203ENST00000409470 RGS3P49796 1198 aa26.39■■□□□ 1.81
USP39-203ENST00000409470 C1orf167Q5SNV9 1468 aa26.39■■□□□ 1.81
USP39-203ENST00000409470 LMOD2Q6P5Q4 547 aa26.38■■□□□ 1.81
USP39-203ENST00000409470 RWDD1Q9H446 243 aaPredicted RBP26.38■■□□□ 1.81
USP39-203ENST00000409470 ATF3P18847 181 aa26.37■■□□□ 1.81
USP39-203ENST00000409470 HSPA2P54652 639 aa26.37■■□□□ 1.81
USP39-203ENST00000409470 KRT28Q7Z3Y7 464 aa26.36■■□□□ 1.81
USP39-203ENST00000409470 TMEM94Q12767 1356 aa26.36■■□□□ 1.81
USP39-203ENST00000409470 CRB1P82279 1406 aa26.35■■□□□ 1.81
USP39-203ENST00000409470 KIF1AQ12756 1690 aa26.35■■□□□ 1.81
USP39-203ENST00000409470 ARHGAP45Q92619 1136 aa26.35■■□□□ 1.81
USP39-203ENST00000409470 PLEKHG5O94827 1062 aa26.34■■□□□ 1.81
USP39-203ENST00000409470 ANP32AP39687 249 aaKnown RBP26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms