RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 KIAA1210Q9ULL0 1709 aa16.63■□□□□ 0.25
COL6A2-204ENST00000409416 L1TD1Q5T7N2 865 aaKnown RBP16.63■□□□□ 0.25
COL6A2-204ENST00000409416 KIDINS220Q9ULH0 1771 aa16.63■□□□□ 0.25
COL6A2-204ENST00000409416 ADGRB3O60242 1522 aa16.63■□□□□ 0.25
COL6A2-204ENST00000409416 NFE2L2Q16236 605 aa16.63■□□□□ 0.25
COL6A2-204ENST00000409416 CHD1LQ86WJ1 897 aa16.63■□□□□ 0.25
COL6A2-204ENST00000409416 DDX54Q8TDD1 881 aaKnown RBP16.63■□□□□ 0.25
COL6A2-204ENST00000409416 ANTXR1Q9H6X2 564 aa16.63■□□□□ 0.25
COL6A2-204ENST00000409416 ABCA9Q8IUA7 1624 aa16.62■□□□□ 0.25
COL6A2-204ENST00000409416 ACEP12821 1306 aa16.62■□□□□ 0.25
COL6A2-204ENST00000409416 IQSEC2Q5JU85 1478 aa16.62■□□□□ 0.25
COL6A2-204ENST00000409416 TRAK2O60296 914 aa16.62■□□□□ 0.25
COL6A2-204ENST00000409416 IL1RAPL2Q9NP60 686 aa16.62■□□□□ 0.25
COL6A2-204ENST00000409416 ARAP3Q8WWN8 1544 aa16.62■□□□□ 0.25
COL6A2-204ENST00000409416 ESCO1Q5FWF5 840 aa16.61■□□□□ 0.25
COL6A2-204ENST00000409416 PANK2Q9BZ23 570 aa16.61■□□□□ 0.25
COL6A2-204ENST00000409416 ZBTB40Q9NUA8 1239 aa16.61■□□□□ 0.25
COL6A2-204ENST00000409416 AMOTL2Q9Y2J4 779 aa16.61■□□□□ 0.25
COL6A2-204ENST00000409416 GNAI1P63096 354 aa16.61■□□□□ 0.25
COL6A2-204ENST00000409416 NSD2O96028 1365 aa16.61■□□□□ 0.25
COL6A2-204ENST00000409416 HDAC1Q13547 482 aaPredicted RBP16.61■□□□□ 0.25
COL6A2-204ENST00000409416 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.61■□□□□ 0.25
COL6A2-204ENST00000409416 CT47B1P0C2W7 299 aaPredicted RBP16.6■□□□□ 0.25
COL6A2-204ENST00000409416 TULP4Q9NRJ4 1543 aa16.6■□□□□ 0.25
COL6A2-204ENST00000409416 POGZQ7Z3K3 1410 aa16.6■□□□□ 0.25
COL6A2-204ENST00000409416 HDGFP51858 240 aaKnown RBP16.6■□□□□ 0.25
COL6A2-204ENST00000409416 SHPRHQ149N8 1683 aa16.6■□□□□ 0.25
COL6A2-204ENST00000409416 STK31Q9BXU1 1019 aa16.6■□□□□ 0.25
COL6A2-204ENST00000409416 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.59■□□□□ 0.25
COL6A2-204ENST00000409416 PIP4K2AP48426 406 aaPredicted RBP16.59■□□□□ 0.25
COL6A2-204ENST00000409416 FCHSD2O94868 740 aa16.59■□□□□ 0.25
COL6A2-204ENST00000409416 JARID2Q92833 1246 aaPredicted RBP16.59■□□□□ 0.25
COL6A2-204ENST00000409416 ABCC11Q96J66 1382 aa16.59■□□□□ 0.25
COL6A2-204ENST00000409416 NRXN1Q9ULB1 1477 aa16.58■□□□□ 0.25
COL6A2-204ENST00000409416 MPNDQ8N594 471 aa16.58■□□□□ 0.25
COL6A2-204ENST00000409416 ADGRB1O14514 1584 aa16.58■□□□□ 0.25
COL6A2-204ENST00000409416 GLI2P10070 1586 aa16.58■□□□□ 0.25
COL6A2-204ENST00000409416 SMC5Q8IY18 1101 aa16.58■□□□□ 0.24
COL6A2-204ENST00000409416 CSB-PGBD3P0DP91 1061 aa16.58■□□□□ 0.24
COL6A2-204ENST00000409416 LTKP29376 864 aa16.58■□□□□ 0.24
COL6A2-204ENST00000409416 HAP1P54257 671 aaPredicted RBP16.58■□□□□ 0.24
COL6A2-204ENST00000409416 ZC3H6P61129 1189 aaKnown RBP16.58■□□□□ 0.24
COL6A2-204ENST00000409416 G2E3Q7L622 706 aa16.57■□□□□ 0.24
COL6A2-204ENST00000409416 MEIS3Q99687 375 aa16.57■□□□□ 0.24
COL6A2-204ENST00000409416 PSME1Q06323 249 aa16.57■□□□□ 0.24
COL6A2-204ENST00000409416 CHAMP1Q96JM3 812 aa16.57■□□□□ 0.24
COL6A2-204ENST00000409416 ARID3AQ99856 593 aa16.57■□□□□ 0.24
COL6A2-204ENST00000409416 NUCB1Q02818 461 aa16.57■□□□□ 0.24
COL6A2-204ENST00000409416 EIF4A2Q14240 407 aaKnown RBP16.57■□□□□ 0.24
COL6A2-204ENST00000409416 PLCB2Q00722 1185 aa16.56■□□□□ 0.24
COL6A2-204ENST00000409416 YTHDC2Q9H6S0 1430 aaKnown RBP16.56■□□□□ 0.24
COL6A2-204ENST00000409416 NLRP1Q9C000 1473 aa16.56■□□□□ 0.24
COL6A2-204ENST00000409416 ZMYND15Q9H091 742 aa16.56■□□□□ 0.24
COL6A2-204ENST00000409416 RSPH6AQ9H0K4 717 aa16.56■□□□□ 0.24
COL6A2-204ENST00000409416 METP08581 1390 aa16.56■□□□□ 0.24
COL6A2-204ENST00000409416 ABCC3O15438 1527 aa16.55■□□□□ 0.24
COL6A2-204ENST00000409416 SETD1BQ9UPS6 1966 aaKnown RBP16.55■□□□□ 0.24
COL6A2-204ENST00000409416 VAMP4O75379 141 aa16.55■□□□□ 0.24
COL6A2-204ENST00000409416 XRCC6P12956 609 aaKnown RBP eCLIP16.55■□□□□ 0.24
COL6A2-204ENST00000409416 NAP1L5Q96NT1 182 aaPredicted RBP16.55■□□□□ 0.24
COL6A2-204ENST00000409416 PPIP5K1Q6PFW1 1433 aa16.54■□□□□ 0.24
COL6A2-204ENST00000409416 SETBP1Q9Y6X0 1596 aa16.54■□□□□ 0.24
COL6A2-204ENST00000409416 DDX17Q92841 729 aaKnown RBP16.54■□□□□ 0.24
COL6A2-204ENST00000409416 LRRC59Q96AG4 307 aaKnown RBP16.54■□□□□ 0.24
COL6A2-204ENST00000409416 KAT6BQ8WYB5 2073 aa16.53■□□□□ 0.24
COL6A2-204ENST00000409416 FAM43AQ8N2R8 423 aa16.53■□□□□ 0.24
COL6A2-204ENST00000409416 TBC1D9Q6ZT07 1266 aa16.52■□□□□ 0.24
COL6A2-204ENST00000409416 CALD1Q05682 793 aaKnown RBP16.52■□□□□ 0.24
COL6A2-204ENST00000409416 MPRIPQ6WCQ1 1025 aa16.52■□□□□ 0.24
COL6A2-204ENST00000409416 RRAGDQ9NQL2 400 aaPredicted RBP16.52■□□□□ 0.24
COL6A2-204ENST00000409416 IL16Q14005 1332 aa16.52■□□□□ 0.23
COL6A2-204ENST00000409416 ALDH1L2Q3SY69 923 aa16.52■□□□□ 0.23
COL6A2-204ENST00000409416 CHMP3Q9Y3E7 222 aa16.52■□□□□ 0.23
COL6A2-204ENST00000409416 PPLO60437 1756 aa16.51■□□□□ 0.23
COL6A2-204ENST00000409416 PUS7Q96PZ0 661 aaKnown RBP16.51■□□□□ 0.23
COL6A2-204ENST00000409416 ANO2Q9NQ90 1003 aa16.51■□□□□ 0.23
COL6A2-204ENST00000409416 NUTM1Q86Y26 1132 aa16.51■□□□□ 0.23
COL6A2-204ENST00000409416 MRPL50Q8N5N7 158 aaKnown RBP16.51■□□□□ 0.23
COL6A2-204ENST00000409416 TNPO1Q92973 898 aaKnown RBP16.51■□□□□ 0.23
COL6A2-204ENST00000409416 RIMS2Q9UQ26 1411 aa16.51■□□□□ 0.23
COL6A2-204ENST00000409416 ZBTB7BO15156 539 aaPredicted RBP16.51■□□□□ 0.23
COL6A2-204ENST00000409416 CAMSAP1Q5T5Y3 1602 aa16.51■□□□□ 0.23
COL6A2-204ENST00000409416 IFT172Q9UG01 1749 aa16.5■□□□□ 0.23
COL6A2-204ENST00000409416 DDX11L8A8MPP1 907 aa16.5■□□□□ 0.23
COL6A2-204ENST00000409416 NAP1L2Q9ULW6 460 aaPredicted RBP16.5■□□□□ 0.23
COL6A2-204ENST00000409416 MYO3AQ8NEV4 1616 aa16.5■□□□□ 0.23
COL6A2-204ENST00000409416 CD2BP2O95400 341 aaKnown RBP16.5■□□□□ 0.23
COL6A2-204ENST00000409416 MTHFSDQ2M296 383 aaKnown RBP16.5■□□□□ 0.23
COL6A2-204ENST00000409416 GBP4Q96PP9 640 aa16.5■□□□□ 0.23
COL6A2-204ENST00000409416 LMTK2Q8IWU2 1503 aa16.5■□□□□ 0.23
COL6A2-204ENST00000409416 FRMPD1Q5SYB0 1578 aa16.49■□□□□ 0.23
COL6A2-204ENST00000409416 SIL1Q9H173 461 aa16.49■□□□□ 0.23
COL6A2-204ENST00000409416 PRR36Q9H6K5 1346 aa16.49■□□□□ 0.23
COL6A2-204ENST00000409416 MLH3Q9UHC1 1453 aa16.49■□□□□ 0.23
COL6A2-204ENST00000409416 LMOD3Q0VAK6 560 aa16.49■□□□□ 0.23
COL6A2-204ENST00000409416 TEFQ10587 303 aa16.49■□□□□ 0.23
COL6A2-204ENST00000409416 TRIM44Q96DX7 344 aaPredicted RBP16.49■□□□□ 0.23
COL6A2-204ENST00000409416 CHMP4BQ9H444 224 aaKnown RBP16.49■□□□□ 0.23
COL6A2-204ENST00000409416 HECW2Q9P2P5 1572 aa16.48■□□□□ 0.23
COL6A2-204ENST00000409416 KCNA6P17658 529 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms