RNA–Protein interactions for RNA: ENST00000409252.6

SH3D19-202, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SH3D19, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-202ENST00000409252 TMPOP42166 694 aaKnown RBP10.64□□□□□ -0.71
SH3D19-202ENST00000409252 CCDC184Q52MB2 194 aa10.64□□□□□ -0.71
SH3D19-202ENST00000409252 IFNL2Q8IZJ0 200 aa10.64□□□□□ -0.71
SH3D19-202ENST00000409252 ADGRL3Q9HAR2 1447 aa10.64□□□□□ -0.71
SH3D19-202ENST00000409252 MAP3K19Q56UN5 1328 aa10.64□□□□□ -0.71
SH3D19-202ENST00000409252 CCDC30Q5VVM6 783 aa10.63□□□□□ -0.71
SH3D19-202ENST00000409252 KIF6Q6ZMV9 814 aa10.63□□□□□ -0.71
SH3D19-202ENST00000409252 MCM10Q7L590 875 aa10.63□□□□□ -0.71
SH3D19-202ENST00000409252 CERKQ8TCT0 537 aa10.63□□□□□ -0.71
SH3D19-202ENST00000409252 C9orf78Q9NZ63 289 aaPredicted RBP10.63□□□□□ -0.71
SH3D19-202ENST00000409252 POLKQ9UBT6 870 aa10.63□□□□□ -0.71
SH3D19-202ENST00000409252 HMMRO75330 724 aa10.63□□□□□ -0.71
SH3D19-202ENST00000409252 HOXC9P31274 260 aa10.63□□□□□ -0.71
SH3D19-202ENST00000409252 DDB1Q16531 1140 aa10.63□□□□□ -0.71
SH3D19-202ENST00000409252 G3V3G9 751 aa10.63□□□□□ -0.71
SH3D19-202ENST00000409252 DCAF8Q5TAQ9 597 aa10.63□□□□□ -0.71
SH3D19-202ENST00000409252 CASC1Q6TDU7 716 aa10.63□□□□□ -0.71
SH3D19-202ENST00000409252 TSR2Q969E8 191 aaKnown RBP10.63□□□□□ -0.71
SH3D19-202ENST00000409252 API5Q9BZZ5 524 aaKnown RBP10.63□□□□□ -0.71
SH3D19-202ENST00000409252 RGS3P49796 1198 aa10.63□□□□□ -0.71
SH3D19-202ENST00000409252 EIF4A2Q14240 407 aaKnown RBP10.63□□□□□ -0.71
SH3D19-202ENST00000409252 HDGFL1Q5TGJ6 251 aa10.62□□□□□ -0.71
SH3D19-202ENST00000409252 ZCRB1Q8TBF4 217 aaKnown RBP10.62□□□□□ -0.71
SH3D19-202ENST00000409252 IP6K1Q92551 441 aa10.62□□□□□ -0.71
SH3D19-202ENST00000409252 IL2RBP14784 551 aa10.62□□□□□ -0.71
SH3D19-202ENST00000409252 TWISTNBQ3B726 338 aaPredicted RBP10.62□□□□□ -0.71
SH3D19-202ENST00000409252 PPP4R2Q9NY27 417 aa10.62□□□□□ -0.71
SH3D19-202ENST00000409252 PTCD1O75127 700 aaKnown RBP10.62□□□□□ -0.71
SH3D19-202ENST00000409252 EXOSC9Q06265 439 aaKnown RBP10.62□□□□□ -0.71
SH3D19-202ENST00000409252 DCTN1Q14203 1278 aa10.62□□□□□ -0.71
SH3D19-202ENST00000409252 GORABQ5T7V8 394 aa10.62□□□□□ -0.71
SH3D19-202ENST00000409252 BRINP3Q76B58 766 aa10.62□□□□□ -0.71
SH3D19-202ENST00000409252 THUMPD2Q9BTF0 503 aaKnown RBP10.62□□□□□ -0.71
SH3D19-202ENST00000409252 USP21Q9UK80 565 aa10.62□□□□□ -0.71
SH3D19-202ENST00000409252 DEPDC5O75140 1603 aa10.61□□□□□ -0.71
SH3D19-202ENST00000409252 KIF16BQ96L93 1317 aa10.61□□□□□ -0.71
SH3D19-202ENST00000409252 PRR36Q9H6K5 1346 aa10.61□□□□□ -0.71
SH3D19-202ENST00000409252 NEXMIFQ5QGS0 1516 aa10.61□□□□□ -0.71
SH3D19-202ENST00000409252 HMGB2P26583 209 aaKnown RBP10.6□□□□□ -0.71
SH3D19-202ENST00000409252 FAM177BA6PVY3 158 aa10.6□□□□□ -0.71
SH3D19-202ENST00000409252 ANKARQ7Z5J8 1434 aa10.6□□□□□ -0.71
SH3D19-202ENST00000409252 SBNO1A3KN83 1393 aa10.6□□□□□ -0.71
SH3D19-202ENST00000409252 HSP90AA1P07900 732 aaKnown RBP10.6□□□□□ -0.71
SH3D19-202ENST00000409252 RWDD1Q9H446 243 aaPredicted RBP10.6□□□□□ -0.71
SH3D19-202ENST00000409252 WDR63Q8IWG1 891 aa10.59□□□□□ -0.71
SH3D19-202ENST00000409252 MIS18AQ9NYP9 233 aa10.59□□□□□ -0.71
SH3D19-202ENST00000409252 PLIN1O60240 522 aa10.59□□□□□ -0.71
SH3D19-202ENST00000409252 ANP32AP39687 249 aaKnown RBP10.59□□□□□ -0.71
SH3D19-202ENST00000409252 AEBP1Q8IUX7 1158 aa10.59□□□□□ -0.71
SH3D19-202ENST00000409252 CDCA7LQ96GN5 454 aa10.59□□□□□ -0.71
SH3D19-202ENST00000409252 BCORL1Q5H9F3 1711 aa10.59□□□□□ -0.71
SH3D19-202ENST00000409252 VWDEQ8N2E2 1590 aa10.59□□□□□ -0.71
SH3D19-202ENST00000409252 STARD3NLO95772 234 aa10.59□□□□□ -0.71
SH3D19-202ENST00000409252 MYL6BP14649 208 aa10.59□□□□□ -0.71
SH3D19-202ENST00000409252 B4GALNT3Q6L9W6 998 aa10.59□□□□□ -0.71
SH3D19-202ENST00000409252 ACSBG1Q96GR2 724 aa10.59□□□□□ -0.71
SH3D19-202ENST00000409252 LAMC1P11047 1609 aa10.59□□□□□ -0.71
SH3D19-202ENST00000409252 ATP7BP35670 1465 aa10.58□□□□□ -0.71
SH3D19-202ENST00000409252 SETD1BQ9UPS6 1966 aaKnown RBP10.58□□□□□ -0.72
SH3D19-202ENST00000409252 TAF7Q15545 349 aaPredicted RBP10.58□□□□□ -0.72
SH3D19-202ENST00000409252 PTCH1Q13635 1447 aa10.57□□□□□ -0.72
SH3D19-202ENST00000409252 ADAMTS13Q76LX8 1427 aa10.57□□□□□ -0.72
SH3D19-202ENST00000409252 DZIP1LQ8IYY4 767 aaKnown RBP10.57□□□□□ -0.72
SH3D19-202ENST00000409252 EYA1Q99502 592 aa10.57□□□□□ -0.72
SH3D19-202ENST00000409252 PPP1R1BQ9UD71 204 aaPredicted RBP10.57□□□□□ -0.72
SH3D19-202ENST00000409252 USP6P35125 1406 aa10.57□□□□□ -0.72
SH3D19-202ENST00000409252 FAM98CQ17RN3 349 aaKnown RBP10.57□□□□□ -0.72
SH3D19-202ENST00000409252 PARD3Q8TEW0 1356 aa10.57□□□□□ -0.72
SH3D19-202ENST00000409252 TRPM1Q7Z4N2 1603 aa10.57□□□□□ -0.72
SH3D19-202ENST00000409252 FRAT2O75474 233 aaPredicted RBP10.57□□□□□ -0.72
SH3D19-202ENST00000409252 COG6Q9Y2V7 657 aa10.57□□□□□ -0.72
SH3D19-202ENST00000409252 WWC1Q8IX03 1113 aa10.57□□□□□ -0.72
SH3D19-202ENST00000409252 CDCA7Q9BWT1 371 aaPredicted RBP10.57□□□□□ -0.72
SH3D19-202ENST00000409252 MROH1Q8NDA8 1641 aa10.57□□□□□ -0.72
SH3D19-202ENST00000409252 SLC4A2P04920 1241 aa10.56□□□□□ -0.72
SH3D19-202ENST00000409252 RRP1P56182 461 aaKnown RBP10.56□□□□□ -0.72
SH3D19-202ENST00000409252 GPATCH3Q96I76 525 aa10.56□□□□□ -0.72
SH3D19-202ENST00000409252 PCDH11XQ9BZA7 1347 aa10.55□□□□□ -0.72
SH3D19-202ENST00000409252 PCDH11YQ9BZA8 1340 aa10.55□□□□□ -0.72
SH3D19-202ENST00000409252 POLR3AO14802 1390 aaPredicted RBP10.55□□□□□ -0.72
SH3D19-202ENST00000409252 FMNL2Q96PY5 1086 aa10.55□□□□□ -0.72
SH3D19-202ENST00000409252 IFT57Q9NWB7 429 aa10.55□□□□□ -0.72
SH3D19-202ENST00000409252 BCL11BQ9C0K0 894 aaPredicted RBP10.55□□□□□ -0.72
SH3D19-202ENST00000409252 DDX19BQ9UMR2 479 aa10.55□□□□□ -0.72
SH3D19-202ENST00000409252 KIAA0232Q92628 1395 aa10.55□□□□□ -0.72
SH3D19-202ENST00000409252 PER1O15534 1290 aaPredicted RBP10.55□□□□□ -0.72
SH3D19-202ENST00000409252 SETBP1Q9Y6X0 1596 aa10.54□□□□□ -0.72
SH3D19-202ENST00000409252 FAM83GA6ND36 823 aa10.54□□□□□ -0.72
SH3D19-202ENST00000409252 KCNJ4P48050 445 aa10.54□□□□□ -0.72
SH3D19-202ENST00000409252 AKAP4Q5JQC9 854 aa10.54□□□□□ -0.72
SH3D19-202ENST00000409252 MYO3AQ8NEV4 1616 aa10.54□□□□□ -0.72
SH3D19-202ENST00000409252 TMEM131LA2VDJ0 1609 aa10.54□□□□□ -0.72
SH3D19-202ENST00000409252 CDC42BPGQ6DT37 1551 aa10.54□□□□□ -0.72
SH3D19-202ENST00000409252 TULP4Q9NRJ4 1543 aa10.54□□□□□ -0.72
SH3D19-202ENST00000409252 DUSP27Q5VZP5 1158 aa10.53□□□□□ -0.72
SH3D19-202ENST00000409252 NPC1L1Q9UHC9 1359 aa10.53□□□□□ -0.72
SH3D19-202ENST00000409252 EIF5BO60841 1220 aaKnown RBP10.53□□□□□ -0.72
SH3D19-202ENST00000409252 HSP90B1P14625 803 aaKnown RBP10.53□□□□□ -0.72
SH3D19-202ENST00000409252 BICDL1Q6ZP65 573 aa10.53□□□□□ -0.72
SH3D19-202ENST00000409252 AK7Q96M32 723 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms