RNA–Protein interactions for RNA: ENST00000409148.1

LRRTM1-202, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LRRTM1, Length 2,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-202ENST00000409148 KCNA6P17658 529 aa22.1■■□□□ 1.13
LRRTM1-202ENST00000409148 ANKLE2Q86XL3 938 aa22.1■■□□□ 1.13
LRRTM1-202ENST00000409148 SMC4Q9NTJ3 1288 aa22.1■■□□□ 1.13
LRRTM1-202ENST00000409148 FMN2Q9NZ56 1722 aa22.1■■□□□ 1.13
LRRTM1-202ENST00000409148 LMOD3Q0VAK6 560 aa22.1■■□□□ 1.13
LRRTM1-202ENST00000409148 NGDNQ8NEJ9 315 aaKnown RBP22.1■■□□□ 1.13
LRRTM1-202ENST00000409148 PMFBP1Q8TBY8 1022 aa22.09■■□□□ 1.13
LRRTM1-202ENST00000409148 CHD2O14647 1828 aaKnown RBP22.08■■□□□ 1.12
LRRTM1-202ENST00000409148 RLBP1P12271 317 aa22.07■■□□□ 1.12
LRRTM1-202ENST00000409148 DLG5Q8TDM6 1919 aa22.07■■□□□ 1.12
LRRTM1-202ENST00000409148 PEAK1Q9H792 1746 aa22.06■■□□□ 1.12
LRRTM1-202ENST00000409148 PRKCSHP14314 528 aaPredicted RBP22.06■■□□□ 1.12
LRRTM1-202ENST00000409148 DEKP35659 375 aaKnown RBP22.06■■□□□ 1.12
LRRTM1-202ENST00000409148 EIF4A2Q14240 407 aaKnown RBP22.06■■□□□ 1.12
LRRTM1-202ENST00000409148 FTSJ3Q8IY81 847 aaKnown RBP22.06■■□□□ 1.12
LRRTM1-202ENST00000409148 DZIP1LQ8IYY4 767 aaKnown RBP22.06■■□□□ 1.12
LRRTM1-202ENST00000409148 SSH1Q8WYL5 1049 aa22.06■■□□□ 1.12
LRRTM1-202ENST00000409148 SKAP1Q86WV1 359 aa22.06■■□□□ 1.12
LRRTM1-202ENST00000409148 ZNF428Q96B54 188 aa22.06■■□□□ 1.12
LRRTM1-202ENST00000409148 GNAI1P63096 354 aa22.05■■□□□ 1.12
LRRTM1-202ENST00000409148 MVPQ14764 893 aaKnown RBP22.05■■□□□ 1.12
LRRTM1-202ENST00000409148 IFT57Q9NWB7 429 aa22.05■■□□□ 1.12
LRRTM1-202ENST00000409148 TNNQ9UQP3 1299 aa22.05■■□□□ 1.12
LRRTM1-202ENST00000409148 ALDH1L2Q3SY69 923 aa22.04■■□□□ 1.12
LRRTM1-202ENST00000409148 KIF16BQ96L93 1317 aa22.04■■□□□ 1.12
LRRTM1-202ENST00000409148 IGHDP01880 384 aa22.04■■□□□ 1.12
LRRTM1-202ENST00000409148 PIK3C2AO00443 1686 aa22.04■■□□□ 1.12
LRRTM1-202ENST00000409148 RGPD1P0DJD0 1748 aa22.03■■□□□ 1.12
LRRTM1-202ENST00000409148 LAS1LQ9Y4W2 734 aaKnown RBP22.03■■□□□ 1.12
LRRTM1-202ENST00000409148 IPO8O15397 1037 aaKnown RBP22.01■■□□□ 1.11
LRRTM1-202ENST00000409148 ATF7IPQ6VMQ6 1270 aa22.01■■□□□ 1.11
LRRTM1-202ENST00000409148 SBNO1A3KN83 1393 aa22■■□□□ 1.11
LRRTM1-202ENST00000409148 TRIM27P14373 513 aa22■■□□□ 1.11
LRRTM1-202ENST00000409148 SULT6B1Q6IMI4 303 aa22■■□□□ 1.11
LRRTM1-202ENST00000409148 FLT4P35916 1363 aa22■■□□□ 1.11
LRRTM1-202ENST00000409148 ZNF853P0CG23 659 aa22■■□□□ 1.11
LRRTM1-202ENST00000409148 IPO9Q96P70 1041 aaKnown RBP22■■□□□ 1.11
LRRTM1-202ENST00000409148 THUMPD2Q9BTF0 503 aaKnown RBP22■■□□□ 1.11
LRRTM1-202ENST00000409148 USP54Q70EL1 1684 aa22■■□□□ 1.11
LRRTM1-202ENST00000409148 MAP3K19Q56UN5 1328 aa21.99■■□□□ 1.11
LRRTM1-202ENST00000409148 HSP90AB2PQ58FF8 381 aa21.99■■□□□ 1.11
LRRTM1-202ENST00000409148 NOB1Q9ULX3 412 aaKnown RBP21.99■■□□□ 1.11
LRRTM1-202ENST00000409148 ARHGEF10O15013 1369 aa21.98■■□□□ 1.11
LRRTM1-202ENST00000409148 SOX12O15370 315 aa21.98■■□□□ 1.11
LRRTM1-202ENST00000409148 RGS3P49796 1198 aa21.98■■□□□ 1.11
LRRTM1-202ENST00000409148 BRPF1P55201 1214 aaPredicted RBP21.98■■□□□ 1.11
LRRTM1-202ENST00000409148 CFAP44Q96MT7 982 aa21.98■■□□□ 1.11
LRRTM1-202ENST00000409148 DDX19BQ9UMR2 479 aa21.98■■□□□ 1.11
LRRTM1-202ENST00000409148 AEBP1Q8IUX7 1158 aa21.97■■□□□ 1.11
LRRTM1-202ENST00000409148 FAM161AQ3B820 660 aa21.97■■□□□ 1.11
LRRTM1-202ENST00000409148 RWDD1Q9H446 243 aaPredicted RBP21.97■■□□□ 1.11
LRRTM1-202ENST00000409148 PCDHB15Q9Y5E8 787 aa21.97■■□□□ 1.11
LRRTM1-202ENST00000409148 MBIPQ9NS73 344 aa21.96■■□□□ 1.11
LRRTM1-202ENST00000409148 NOP58Q9Y2X3 529 aaKnown RBP21.95■■□□□ 1.11
LRRTM1-202ENST00000409148 NLRP6P59044 892 aa21.95■■□□□ 1.1
LRRTM1-202ENST00000409148 NPHP4O75161 1426 aaPredicted RBP21.95■■□□□ 1.1
LRRTM1-202ENST00000409148 KIF24Q5T7B8 1368 aa21.94■■□□□ 1.1
LRRTM1-202ENST00000409148 ITPRIPQ8IWB1 547 aa21.94■■□□□ 1.1
LRRTM1-202ENST00000409148 MARF1Q9Y4F3 1742 aaKnown RBP21.94■■□□□ 1.1
LRRTM1-202ENST00000409148 VAMP4O75379 141 aa21.94■■□□□ 1.1
LRRTM1-202ENST00000409148 AMPHP49418 695 aa21.94■■□□□ 1.1
LRRTM1-202ENST00000409148 NPM2Q86SE8 214 aaKnown RBP21.94■■□□□ 1.1
LRRTM1-202ENST00000409148 ADGRL3Q9HAR2 1447 aa21.94■■□□□ 1.1
LRRTM1-202ENST00000409148 FAM83GA6ND36 823 aa21.92■■□□□ 1.1
LRRTM1-202ENST00000409148 PHF8Q9UPP1 1060 aa21.92■■□□□ 1.1
LRRTM1-202ENST00000409148 TWISTNBQ3B726 338 aaPredicted RBP21.91■■□□□ 1.1
LRRTM1-202ENST00000409148 TMEM57Q8N5G2 664 aa21.91■■□□□ 1.1
LRRTM1-202ENST00000409148 C8orf34Q49A92 452 aa21.9■■□□□ 1.1
LRRTM1-202ENST00000409148 ARHGAP45Q92619 1136 aa21.9■■□□□ 1.1
LRRTM1-202ENST00000409148 KDRP35968 1356 aa21.9■■□□□ 1.1
LRRTM1-202ENST00000409148 KDM4FA0A1W2PPD8 638 aa21.89■■□□□ 1.1
LRRTM1-202ENST00000409148 DCTN1Q14203 1278 aa21.89■■□□□ 1.1
LRRTM1-202ENST00000409148 MRPL50Q8N5N7 158 aaKnown RBP21.89■■□□□ 1.1
LRRTM1-202ENST00000409148 ABTB2Q8N961 1025 aa21.89■■□□□ 1.1
LRRTM1-202ENST00000409148 ZBTB47Q9UFB7 747 aaPredicted RBP21.89■■□□□ 1.1
LRRTM1-202ENST00000409148 VIRMAQ69YN4 1812 aaKnown RBP21.89■■□□□ 1.09
LRRTM1-202ENST00000409148 TSPYL6Q8N831 410 aa21.89■■□□□ 1.09
LRRTM1-202ENST00000409148 PAK3O75914 559 aaPredicted RBP21.88■■□□□ 1.09
LRRTM1-202ENST00000409148 IGSF1Q8N6C5 1336 aa21.88■■□□□ 1.09
LRRTM1-202ENST00000409148 HAP1P54257 671 aaPredicted RBP21.88■■□□□ 1.09
LRRTM1-202ENST00000409148 CHMP4BQ9H444 224 aaKnown RBP21.86■■□□□ 1.09
LRRTM1-202ENST00000409148 HDAC1Q13547 482 aaPredicted RBP21.86■■□□□ 1.09
LRRTM1-202ENST00000409148 C8orf58Q8NAV2 365 aa21.86■■□□□ 1.09
LRRTM1-202ENST00000409148 NWD1Q149M9 1564 aa21.86■■□□□ 1.09
LRRTM1-202ENST00000409148 ELL2O00472 640 aaPredicted RBP21.85■■□□□ 1.09
LRRTM1-202ENST00000409148 NUTM2GQ5VZR2 741 aa21.85■■□□□ 1.09
LRRTM1-202ENST00000409148 RTL1A6NKG5 1358 aa21.85■■□□□ 1.09
LRRTM1-202ENST00000409148 HOXC9P31274 260 aa21.85■■□□□ 1.09
LRRTM1-202ENST00000409148 EYA1Q99502 592 aa21.85■■□□□ 1.09
LRRTM1-202ENST00000409148 ZBTB40Q9NUA8 1239 aa21.85■■□□□ 1.09
LRRTM1-202ENST00000409148 PDZRN3Q9UPQ7 1066 aa21.85■■□□□ 1.09
LRRTM1-202ENST00000409148 CHL1O00533 1208 aa21.84■■□□□ 1.09
LRRTM1-202ENST00000409148 MCM10Q7L590 875 aa21.83■■□□□ 1.09
LRRTM1-202ENST00000409148 C14orf37Q86TY3 774 aa21.83■■□□□ 1.09
LRRTM1-202ENST00000409148 GAS2L2Q8NHY3 880 aa21.83■■□□□ 1.08
LRRTM1-202ENST00000409148 RBM33Q96EV2 1170 aaKnown RBP21.83■■□□□ 1.08
LRRTM1-202ENST00000409148 DDRGK1Q96HY6 314 aa21.83■■□□□ 1.08
LRRTM1-202ENST00000409148 KIAA0232Q92628 1395 aa21.83■■□□□ 1.08
LRRTM1-202ENST00000409148 RTF1Q92541 710 aaKnown RBP21.82■■□□□ 1.08
LRRTM1-202ENST00000409148 ESCO1Q5FWF5 840 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms