RNA–Protein interactions for RNA: ENST00000406293.7

SYNGR1-205, Transcript of synaptogyrin 1, humanhuman

TSL 2 BASIC

Gene SYNGR1, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-205ENST00000406293 PEAK1Q9H792 1746 aa22.41■■□□□ 1.18
SYNGR1-205ENST00000406293 SBF2Q86WG5 1849 aa22.41■■□□□ 1.18
SYNGR1-205ENST00000406293 MARCH10Q8NA82 808 aaPredicted RBP22.4■■□□□ 1.18
SYNGR1-205ENST00000406293 USP19O94966 1318 aa22.39■■□□□ 1.18
SYNGR1-205ENST00000406293 CCDC61Q9Y6R9 512 aa22.39■■□□□ 1.17
SYNGR1-205ENST00000406293 POLR3AO14802 1390 aaPredicted RBP22.38■■□□□ 1.17
SYNGR1-205ENST00000406293 SGIP1Q9BQI5 828 aa22.37■■□□□ 1.17
SYNGR1-205ENST00000406293 LRRC37A3O60309 1634 aa22.37■■□□□ 1.17
SYNGR1-205ENST00000406293 DCAF11Q8TEB1 546 aa22.36■■□□□ 1.17
SYNGR1-205ENST00000406293 PLEKHG3A1L390 1219 aa22.34■■□□□ 1.17
SYNGR1-205ENST00000406293 CSB-PGBD3P0DP91 1061 aa22.32■■□□□ 1.16
SYNGR1-205ENST00000406293 NLRP6P59044 892 aa22.32■■□□□ 1.16
SYNGR1-205ENST00000406293 CDCA7Q9BWT1 371 aaPredicted RBP22.32■■□□□ 1.16
SYNGR1-205ENST00000406293 EXOC5O00471 708 aa22.31■■□□□ 1.16
SYNGR1-205ENST00000406293 AATKQ6ZMQ8 1374 aa22.3■■□□□ 1.16
SYNGR1-205ENST00000406293 ACSBG1Q96GR2 724 aa22.29■■□□□ 1.16
SYNGR1-205ENST00000406293 WDR17Q8IZU2 1322 aa22.29■■□□□ 1.16
SYNGR1-205ENST00000406293 MAP3K5Q99683 1374 aa22.28■■□□□ 1.16
SYNGR1-205ENST00000406293 SRPK2P78362 688 aaKnown RBP22.28■■□□□ 1.16
SYNGR1-205ENST00000406293 AKAP12Q02952 1782 aa22.27■■□□□ 1.16
SYNGR1-205ENST00000406293 BCL9O00512 1426 aa22.27■■□□□ 1.16
SYNGR1-205ENST00000406293 POLD1P28340 1107 aa22.27■■□□□ 1.16
SYNGR1-205ENST00000406293 ARHGEF28Q8N1W1 1705 aaKnown RBP22.27■■□□□ 1.16
SYNGR1-205ENST00000406293 CEP350Q5VT06 3117 aa22.26■■□□□ 1.15
SYNGR1-205ENST00000406293 AXIN2Q9Y2T1 843 aa22.26■■□□□ 1.15
SYNGR1-205ENST00000406293 TOPAZ1Q8N9V7 1692 aa22.26■■□□□ 1.15
SYNGR1-205ENST00000406293 PPIP5K1Q6PFW1 1433 aa22.24■■□□□ 1.15
SYNGR1-205ENST00000406293 SOX12O15370 315 aa22.24■■□□□ 1.15
SYNGR1-205ENST00000406293 CARD10Q9BWT7 1032 aa22.23■■□□□ 1.15
SYNGR1-205ENST00000406293 ZNF827Q17R98 1081 aa22.22■■□□□ 1.15
SYNGR1-205ENST00000406293 CABP2Q9NPB3 220 aa22.22■■□□□ 1.15
SYNGR1-205ENST00000406293 WNK3Q9BYP7 1800 aa22.2■■□□□ 1.14
SYNGR1-205ENST00000406293 NLGN2Q8NFZ4 835 aa22.2■■□□□ 1.14
SYNGR1-205ENST00000406293 STAC3Q96MF2 364 aa22.19■■□□□ 1.14
SYNGR1-205ENST00000406293 SHANK3Q9BYB0 1731 aa22.19■■□□□ 1.14
SYNGR1-205ENST00000406293 GRIN3BO60391 1043 aa22.18■■□□□ 1.14
SYNGR1-205ENST00000406293 BRD4O60885 1362 aaPredicted RBP22.17■■□□□ 1.14
SYNGR1-205ENST00000406293 SLC16A10Q8TF71 515 aa22.17■■□□□ 1.14
SYNGR1-205ENST00000406293 CABP1Q9NZU7 370 aa22.17■■□□□ 1.14
SYNGR1-205ENST00000406293 SLIT3O75094 1523 aa22.16■■□□□ 1.14
SYNGR1-205ENST00000406293 CPSF1Q10570 1443 aaKnown RBP22.15■■□□□ 1.14
SYNGR1-205ENST00000406293 ARHGEF25Q86VW2 580 aa22.15■■□□□ 1.14
SYNGR1-205ENST00000406293 GPBP1L1Q9HC44 474 aaPredicted RBP22.15■■□□□ 1.14
SYNGR1-205ENST00000406293 USP6P35125 1406 aa22.14■■□□□ 1.14
SYNGR1-205ENST00000406293 CCDC7Q96M83 1385 aa22.14■■□□□ 1.14
SYNGR1-205ENST00000406293 HSPA6P17066 643 aa22.14■■□□□ 1.13
SYNGR1-205ENST00000406293 ZNF526Q8TF50 670 aaPredicted RBP22.14■■□□□ 1.13
SYNGR1-205ENST00000406293 LRRC4BQ9NT99 713 aa22.14■■□□□ 1.13
SYNGR1-205ENST00000406293 COL18A1P39060 1754 aa22.14■■□□□ 1.13
SYNGR1-205ENST00000406293 TNS2Q63HR2 1409 aa22.14■■□□□ 1.13
SYNGR1-205ENST00000406293 ATP10DQ9P241 1426 aa22.14■■□□□ 1.13
SYNGR1-205ENST00000406293 YBX3P16989 372 aaKnown RBP eCLIP22.13■■□□□ 1.13
SYNGR1-205ENST00000406293 KCNH5Q8NCM2 988 aa22.13■■□□□ 1.13
SYNGR1-205ENST00000406293 TFCP2L1Q9NZI6 479 aa22.13■■□□□ 1.13
SYNGR1-205ENST00000406293 NHSQ6T4R5 1651 aa22.13■■□□□ 1.13
SYNGR1-205ENST00000406293 KAT6BQ8WYB5 2073 aa22.13■■□□□ 1.13
SYNGR1-205ENST00000406293 PAPPAQ13219 1627 aa22.12■■□□□ 1.13
SYNGR1-205ENST00000406293 MSH5O43196 834 aa22.11■■□□□ 1.13
SYNGR1-205ENST00000406293 RGPD5Q99666 1765 aa22.1■■□□□ 1.13
SYNGR1-205ENST00000406293 AKT1S1Q96B36 256 aa22.1■■□□□ 1.13
SYNGR1-205ENST00000406293 NLRP2Q9NX02 1062 aa22.1■■□□□ 1.13
SYNGR1-205ENST00000406293 PNPLA7Q6ZV29 1317 aa22.09■■□□□ 1.13
SYNGR1-205ENST00000406293 CENPJQ9HC77 1338 aaPredicted RBP22.08■■□□□ 1.13
SYNGR1-205ENST00000406293 GOLGB1Q14789 3259 aaKnown RBP22.08■■□□□ 1.13
SYNGR1-205ENST00000406293 BTAF1O14981 1849 aa22.06■■□□□ 1.12
SYNGR1-205ENST00000406293 IL2RBP14784 551 aa22.06■■□□□ 1.12
SYNGR1-205ENST00000406293 KCNQ4P56696 695 aa22.06■■□□□ 1.12
SYNGR1-205ENST00000406293 NBPF1Q3BBV0 1214 aa22.06■■□□□ 1.12
SYNGR1-205ENST00000406293 SLC27A3Q5K4L6 730 aa22.06■■□□□ 1.12
SYNGR1-205ENST00000406293 PIK3C2AO00443 1686 aa22.06■■□□□ 1.12
SYNGR1-205ENST00000406293 TTC21BQ7Z4L5 1316 aa22.05■■□□□ 1.12
SYNGR1-205ENST00000406293 SYTL4Q96C24 671 aaPredicted RBP22.03■■□□□ 1.12
SYNGR1-205ENST00000406293 TRPM1Q7Z4N2 1603 aa22.02■■□□□ 1.12
SYNGR1-205ENST00000406293 RAB3GAP2Q9H2M9 1393 aa22.02■■□□□ 1.12
SYNGR1-205ENST00000406293 ABCC6O95255 1503 aa22.02■■□□□ 1.12
SYNGR1-205ENST00000406293 DDX54Q8TDD1 881 aaKnown RBP22.02■■□□□ 1.12
SYNGR1-205ENST00000406293 MSL1Q68DK7 614 aa22.01■■□□□ 1.11
SYNGR1-205ENST00000406293 QRICH2Q9H0J4 1663 aa22■■□□□ 1.11
SYNGR1-205ENST00000406293 ZNF692Q9BU19 519 aaPredicted RBP21.99■■□□□ 1.11
SYNGR1-205ENST00000406293 ERBB3P21860 1342 aa21.97■■□□□ 1.11
SYNGR1-205ENST00000406293 TTC21AQ8NDW8 1320 aa21.97■■□□□ 1.11
SYNGR1-205ENST00000406293 QSER1Q2KHR3 1735 aa21.97■■□□□ 1.11
SYNGR1-205ENST00000406293 ANKRD24Q8TF21 1146 aa21.96■■□□□ 1.11
SYNGR1-205ENST00000406293 EVC2Q86UK5 1308 aa21.96■■□□□ 1.11
SYNGR1-205ENST00000406293 WWC3Q9ULE0 1092 aa21.95■■□□□ 1.1
SYNGR1-205ENST00000406293 COL24A1Q17RW2 1714 aa21.94■■□□□ 1.1
SYNGR1-205ENST00000406293 PRIM1P49642 420 aaKnown RBP21.94■■□□□ 1.1
SYNGR1-205ENST00000406293 COL23A1Q86Y22 540 aaPredicted RBP21.94■■□□□ 1.1
SYNGR1-205ENST00000406293 CCNL1Q9UK58 526 aaPredicted RBP21.94■■□□□ 1.1
SYNGR1-205ENST00000406293 NFAT5O94916 1531 aa21.94■■□□□ 1.1
SYNGR1-205ENST00000406293 CAPN15O75808 1086 aa21.93■■□□□ 1.1
SYNGR1-205ENST00000406293 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.93■■□□□ 1.1
SYNGR1-205ENST00000406293 TUBGCP6Q96RT7 1819 aa21.93■■□□□ 1.1
SYNGR1-205ENST00000406293 KIAA1210Q9ULL0 1709 aa21.93■■□□□ 1.1
SYNGR1-205ENST00000406293 APLP1P51693 650 aa21.92■■□□□ 1.1
SYNGR1-205ENST00000406293 ADCY9O60503 1353 aa21.91■■□□□ 1.1
SYNGR1-205ENST00000406293 KTN1Q86UP2 1357 aaKnown RBP21.91■■□□□ 1.1
SYNGR1-205ENST00000406293 CD2APQ9Y5K6 639 aa21.91■■□□□ 1.1
SYNGR1-205ENST00000406293 LTV1Q96GA3 475 aaPredicted RBP21.89■■□□□ 1.09
SYNGR1-205ENST00000406293 KIF3CO14782 793 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms